RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 KDM2AQ9Y2K7 1162 aa15.91■□□□□ 0.14
TNFAIP3-201ENST00000237289 ADGRL2O95490 1459 aa15.91■□□□□ 0.14
TNFAIP3-201ENST00000237289 HECW2Q9P2P5 1572 aa15.91■□□□□ 0.14
TNFAIP3-201ENST00000237289 AEBP2Q6ZN18 517 aaPredicted RBP15.91■□□□□ 0.14
TNFAIP3-201ENST00000237289 HDGFP51858 240 aaKnown RBP15.9■□□□□ 0.14
TNFAIP3-201ENST00000237289 COL17A1Q9UMD9 1497 aaPredicted RBP15.89■□□□□ 0.13
TNFAIP3-201ENST00000237289 SIN3AQ96ST3 1273 aa15.88■□□□□ 0.13
TNFAIP3-201ENST00000237289 KIF13AQ9H1H9 1805 aa15.88■□□□□ 0.13
TNFAIP3-201ENST00000237289 CLSPNQ9HAW4 1339 aa15.87■□□□□ 0.13
TNFAIP3-201ENST00000237289 SENP3Q9H4L4 574 aaPredicted RBP15.86■□□□□ 0.13
TNFAIP3-201ENST00000237289 CEBPAP49715 358 aaPredicted RBP15.85■□□□□ 0.13
TNFAIP3-201ENST00000237289 CCDC144AA2RUR9 1427 aa15.84■□□□□ 0.13
TNFAIP3-201ENST00000237289 DHX57Q6P158 1386 aaKnown RBP15.83■□□□□ 0.12
TNFAIP3-201ENST00000237289 EID1Q9Y6B2 187 aa15.82■□□□□ 0.12
TNFAIP3-201ENST00000237289 SLC52A1Q9NWF4 448 aa15.81■□□□□ 0.12
TNFAIP3-201ENST00000237289 MAST1Q9Y2H9 1570 aa15.81■□□□□ 0.12
TNFAIP3-201ENST00000237289 ADGBQ8N7X0 1667 aa15.81■□□□□ 0.12
TNFAIP3-201ENST00000237289 FBXO31Q5XUX0 539 aaPredicted RBP15.8■□□□□ 0.12
TNFAIP3-201ENST00000237289 DCAF11Q8TEB1 546 aa15.8■□□□□ 0.12
TNFAIP3-201ENST00000237289 CNTLNQ9NXG0 1405 aa15.8■□□□□ 0.12
TNFAIP3-201ENST00000237289 KDM5CP41229 1560 aa15.8■□□□□ 0.12
TNFAIP3-201ENST00000237289 ZMYM3Q14202 1370 aa15.78■□□□□ 0.12
TNFAIP3-201ENST00000237289 PLXNC1O60486 1568 aa15.77■□□□□ 0.12
TNFAIP3-201ENST00000237289 ZMYM4Q5VZL5 1548 aa15.76■□□□□ 0.11
TNFAIP3-201ENST00000237289 THEMISQ8N1K5 641 aaPredicted RBP15.76■□□□□ 0.11
TNFAIP3-201ENST00000237289 DIP2CQ9Y2E4 1556 aa15.75■□□□□ 0.11
TNFAIP3-201ENST00000237289 NUTM2DQ5VT03 806 aaPredicted RBP15.75■□□□□ 0.11
TNFAIP3-201ENST00000237289 INO80Q9ULG1 1556 aaPredicted RBP15.74■□□□□ 0.11
TNFAIP3-201ENST00000237289 ARHGEF40Q8TER5 1519 aa15.74■□□□□ 0.11
TNFAIP3-201ENST00000237289 TIMELESSQ9UNS1 1208 aa15.74■□□□□ 0.11
TNFAIP3-201ENST00000237289 KIDINS220Q9ULH0 1771 aa15.73■□□□□ 0.11
TNFAIP3-201ENST00000237289 FAM135AQ9P2D6 1515 aa15.73■□□□□ 0.11
TNFAIP3-201ENST00000237289 CROCC2H7BZ55 1655 aa15.73■□□□□ 0.11
TNFAIP3-201ENST00000237289 PPRC1Q5VV67 1664 aaKnown RBP15.73■□□□□ 0.11
TNFAIP3-201ENST00000237289 VGFO15240 615 aaPredicted RBP15.72■□□□□ 0.11
TNFAIP3-201ENST00000237289 TNRQ92752 1358 aa15.72■□□□□ 0.11
TNFAIP3-201ENST00000237289 POLR3GLQ9BT43 218 aa15.72■□□□□ 0.11
TNFAIP3-201ENST00000237289 RICTORQ6R327 1708 aa15.72■□□□□ 0.11
TNFAIP3-201ENST00000237289 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.71■□□□□ 0.11
TNFAIP3-201ENST00000237289 IDI1Q13907 227 aa15.71■□□□□ 0.11
TNFAIP3-201ENST00000237289 ABCA6Q8N139 1617 aa15.71■□□□□ 0.11
TNFAIP3-201ENST00000237289 L3MBTL2Q969R5 705 aa15.7■□□□□ 0.1
TNFAIP3-201ENST00000237289 GCC2Q8IWJ2 1684 aa15.69■□□□□ 0.1
TNFAIP3-201ENST00000237289 TXNDC2Q86VQ3 553 aa15.68■□□□□ 0.1
TNFAIP3-201ENST00000237289 AGLP35573 1532 aa15.68■□□□□ 0.1
TNFAIP3-201ENST00000237289 KDM5DQ9BY66 1539 aa15.67■□□□□ 0.1
TNFAIP3-201ENST00000237289 FRMPD1Q5SYB0 1578 aa15.67■□□□□ 0.1
TNFAIP3-201ENST00000237289 ANKLE2Q86XL3 938 aa15.66■□□□□ 0.1
TNFAIP3-201ENST00000237289 ANKRD30BQ9BXX2 1392 aa15.66■□□□□ 0.1
TNFAIP3-201ENST00000237289 STAC3Q96MF2 364 aa15.65■□□□□ 0.1
TNFAIP3-201ENST00000237289 PZPP20742 1482 aa15.64■□□□□ 0.09
TNFAIP3-201ENST00000237289 C14orf37Q86TY3 774 aa15.64■□□□□ 0.09
TNFAIP3-201ENST00000237289 CARD11Q9BXL7 1154 aa15.63■□□□□ 0.09
TNFAIP3-201ENST00000237289 EIF2AK4Q9P2K8 1649 aaKnown RBP15.63■□□□□ 0.09
TNFAIP3-201ENST00000237289 NPATQ14207 1427 aa15.63■□□□□ 0.09
TNFAIP3-201ENST00000237289 RPGRIP1LQ68CZ1 1315 aa15.62■□□□□ 0.09
TNFAIP3-201ENST00000237289 ABCC3O15438 1527 aa15.61■□□□□ 0.09
TNFAIP3-201ENST00000237289 POGKQ9P215 609 aa15.61■□□□□ 0.09
TNFAIP3-201ENST00000237289 STK26Q9P289 416 aa15.6■□□□□ 0.09
TNFAIP3-201ENST00000237289 RPRD2Q5VT52 1461 aaKnown RBP15.6■□□□□ 0.09
TNFAIP3-201ENST00000237289 UHRF1BP1Q6BDS2 1440 aa15.59■□□□□ 0.09
TNFAIP3-201ENST00000237289 EIF4G2P78344 907 aaKnown RBP eCLIP15.57■□□□□ 0.083e-7■■■■■ 30.4
TNFAIP3-201ENST00000237289 REREQ9P2R6 1566 aa15.57■□□□□ 0.08
TNFAIP3-201ENST00000237289 PRDM15P57071 1507 aaPredicted RBP15.56■□□□□ 0.08
TNFAIP3-201ENST00000237289 ARHGAP31Q2M1Z3 1444 aa15.56■□□□□ 0.08
TNFAIP3-201ENST00000237289 CFAP65Q6ZU64 1925 aaKnown RBP15.56■□□□□ 0.08
TNFAIP3-201ENST00000237289 ROCK2O75116 1388 aaKnown RBP15.56■□□□□ 0.08
TNFAIP3-201ENST00000237289 HSPA2P54652 639 aa15.55■□□□□ 0.08
TNFAIP3-201ENST00000237289 UNC13BO14795 1591 aa15.55■□□□□ 0.08
TNFAIP3-201ENST00000237289 ERVK-7P63135 1459 aa15.53■□□□□ 0.08
TNFAIP3-201ENST00000237289 IQGAP3Q86VI3 1631 aa15.53■□□□□ 0.08
TNFAIP3-201ENST00000237289 SLC26A8Q96RN1 970 aa15.52■□□□□ 0.08
TNFAIP3-201ENST00000237289 KDM4FA0A1W2PPD8 638 aa15.52■□□□□ 0.08
TNFAIP3-201ENST00000237289 EFCAB6Q5THR3 1501 aa15.52■□□□□ 0.08
TNFAIP3-201ENST00000237289 TET3O43151 1660 aa15.52■□□□□ 0.07
TNFAIP3-201ENST00000237289 SAFB2Q14151 953 aaKnown RBP eCLIP15.52■□□□□ 0.07
TNFAIP3-201ENST00000237289 DMRT2Q9Y5R5 561 aa15.52■□□□□ 0.07
TNFAIP3-201ENST00000237289 LMTK2Q8IWU2 1503 aa15.51■□□□□ 0.07
TNFAIP3-201ENST00000237289 CFAP70Q5T0N1 1121 aa15.51■□□□□ 0.07
TNFAIP3-201ENST00000237289 CLTCQ00610 1675 aaKnown RBP15.51■□□□□ 0.07
TNFAIP3-201ENST00000237289 PTPRMP28827 1452 aa15.5■□□□□ 0.07
TNFAIP3-201ENST00000237289 RNF17Q9BXT8 1623 aaKnown RBP15.5■□□□□ 0.07
TNFAIP3-201ENST00000237289 TRAK1Q9UPV9 953 aa15.5■□□□□ 0.07
TNFAIP3-201ENST00000237289 RIMS2Q9UQ26 1411 aa15.49■□□□□ 0.07
TNFAIP3-201ENST00000237289 NLRP1Q9C000 1473 aa15.48■□□□□ 0.07
TNFAIP3-201ENST00000237289 SLC24A1O60721 1099 aa15.48■□□□□ 0.07
TNFAIP3-201ENST00000237289 TMEM132EQ6IEE7 984 aa15.48■□□□□ 0.07
TNFAIP3-201ENST00000237289 HIRIP3Q9BW71 556 aaPredicted RBP15.48■□□□□ 0.07
TNFAIP3-201ENST00000237289 CEP152O94986 1710 aa15.48■□□□□ 0.07
TNFAIP3-201ENST00000237289 NOS1P29475 1434 aa15.48■□□□□ 0.07
TNFAIP3-201ENST00000237289 PTPRTO14522 1441 aa15.48■□□□□ 0.07
TNFAIP3-201ENST00000237289 ADGRF5Q8IZF2 1346 aa15.47■□□□□ 0.07
TNFAIP3-201ENST00000237289 RIMS1Q86UR5 1692 aaKnown RBP15.47■□□□□ 0.07
TNFAIP3-201ENST00000237289 NCKAP5LQ9HCH0 1330 aa15.46■□□□□ 0.07
TNFAIP3-201ENST00000237289 EIF3AQ14152 1382 aaKnown RBP15.46■□□□□ 0.07
TNFAIP3-201ENST00000237289 MADDQ8WXG6 1647 aa15.46■□□□□ 0.07
TNFAIP3-201ENST00000237289 ZC3H13Q5T200 1668 aaKnown RBP15.46■□□□□ 0.07
TNFAIP3-201ENST00000237289 CAMSAP1Q5T5Y3 1602 aa15.45■□□□□ 0.06
TNFAIP3-201ENST00000237289 CDCA8Q53HL2 280 aa15.45■□□□□ 0.06
TNFAIP3-201ENST00000237289 TMEM2Q9UHN6 1383 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms