RNA–Protein interactions for RNA: ENST00000235453.8

DENND1B-201, Transcript of DENN domain containing 1B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DENND1B, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1B-201ENST00000235453 MAGI1Q96QZ7 1491 aaPredicted RBP13.03□□□□□ -0.32
DENND1B-201ENST00000235453 ARHGEF11O15085 1522 aa13.03□□□□□ -0.32
DENND1B-201ENST00000235453 SYNJ2O15056 1496 aa13.02□□□□□ -0.32
DENND1B-201ENST00000235453 POTEDQ86YR6 584 aa13.02□□□□□ -0.33
DENND1B-201ENST00000235453 CHIC2Q9UKJ5 165 aa13.02□□□□□ -0.33
DENND1B-201ENST00000235453 XRCC6P12956 609 aaKnown RBP eCLIP13.01□□□□□ -0.33
DENND1B-201ENST00000235453 RGS3P49796 1198 aa13.01□□□□□ -0.33
DENND1B-201ENST00000235453 ZNF326Q5BKZ1 582 aaKnown RBP13.01□□□□□ -0.33
DENND1B-201ENST00000235453 POGKQ9P215 609 aa13.01□□□□□ -0.33
DENND1B-201ENST00000235453 UACAQ9BZF9 1416 aa13.01□□□□□ -0.33
DENND1B-201ENST00000235453 NUP153P49790 1475 aaKnown RBP13.01□□□□□ -0.33
DENND1B-201ENST00000235453 MTERF4Q7Z6M4 381 aaKnown RBP13□□□□□ -0.33
DENND1B-201ENST00000235453 ESPNB1AK53 854 aa12.99□□□□□ -0.33
DENND1B-201ENST00000235453 HSPA5P11021 654 aaKnown RBP12.99□□□□□ -0.33
DENND1B-201ENST00000235453 RRP7BPQ9NSQ0 103 aa12.99□□□□□ -0.33
DENND1B-201ENST00000235453 RAPGEF6Q8TEU7 1601 aa12.99□□□□□ -0.33
DENND1B-201ENST00000235453 PLB1Q6P1J6 1458 aa12.99□□□□□ -0.33
DENND1B-201ENST00000235453 GOLGA6L3A6NEY3 463 aa12.98□□□□□ -0.33
DENND1B-201ENST00000235453 EIF4G2P78344 907 aaKnown RBP eCLIP12.98□□□□□ -0.33
DENND1B-201ENST00000235453 TPRNQ4KMQ1 711 aa12.98□□□□□ -0.33
DENND1B-201ENST00000235453 EXOC6Q8TAG9 804 aa12.98□□□□□ -0.33
DENND1B-201ENST00000235453 VIRMAQ69YN4 1812 aaKnown RBP12.97□□□□□ -0.33
DENND1B-201ENST00000235453 FAM161AQ3B820 660 aa12.97□□□□□ -0.33
DENND1B-201ENST00000235453 NAIPQ13075 1403 aa12.97□□□□□ -0.33
DENND1B-201ENST00000235453 MRE11P49959 708 aa12.97□□□□□ -0.33
DENND1B-201ENST00000235453 JPH4Q96JJ6 628 aa12.96□□□□□ -0.33
DENND1B-201ENST00000235453 HFM1A2PYH4 1435 aa12.96□□□□□ -0.33
DENND1B-201ENST00000235453 KDM6BO15054 1643 aa12.96□□□□□ -0.34
DENND1B-201ENST00000235453 IPO4Q8TEX9 1081 aaKnown RBP12.96□□□□□ -0.34
DENND1B-201ENST00000235453 ZNF644Q9H582 1327 aaPredicted RBP12.95□□□□□ -0.34
DENND1B-201ENST00000235453 NUP160Q12769 1436 aa12.95□□□□□ -0.34
DENND1B-201ENST00000235453 GTF2E1P29083 439 aaPredicted RBP12.95□□□□□ -0.34
DENND1B-201ENST00000235453 PRG4Q92954 1404 aaPredicted RBP12.94□□□□□ -0.34
DENND1B-201ENST00000235453 SLC4A3P48751 1232 aa12.94□□□□□ -0.34
DENND1B-201ENST00000235453 PDE3BQ13370 1112 aa12.94□□□□□ -0.34
DENND1B-201ENST00000235453 RSPH4AQ5TD94 716 aa12.94□□□□□ -0.34
DENND1B-201ENST00000235453 LRPPRCP42704 1394 aaKnown RBP12.94□□□□□ -0.34
DENND1B-201ENST00000235453 KTN1Q86UP2 1357 aaKnown RBP12.94□□□□□ -0.34
DENND1B-201ENST00000235453 BBXQ8WY36 941 aaPredicted RBP12.93□□□□□ -0.34
DENND1B-201ENST00000235453 NAP1L2Q9ULW6 460 aaPredicted RBP12.93□□□□□ -0.34
DENND1B-201ENST00000235453 TCOF1Q13428 1488 aaKnown RBP12.93□□□□□ -0.34
DENND1B-201ENST00000235453 C8orf34Q49A92 452 aa12.93□□□□□ -0.34
DENND1B-201ENST00000235453 KDM2BQ8NHM5 1336 aa12.92□□□□□ -0.34
DENND1B-201ENST00000235453 STAC3Q96MF2 364 aa12.92□□□□□ -0.34
DENND1B-201ENST00000235453 CANXP27824 592 aaKnown RBP12.91□□□□□ -0.34
DENND1B-201ENST00000235453 RCAN3Q9UKA8 241 aa12.91□□□□□ -0.34
DENND1B-201ENST00000235453 DMTNQ08495 405 aa12.9□□□□□ -0.34
DENND1B-201ENST00000235453 KIF14Q15058 1648 aa12.9□□□□□ -0.34
DENND1B-201ENST00000235453 DHX29Q7Z478 1369 aaKnown RBP12.9□□□□□ -0.34
DENND1B-201ENST00000235453 OFD1O75665 1012 aa12.89□□□□□ -0.35
DENND1B-201ENST00000235453 MYH16Q9H6N6 1097 aa12.89□□□□□ -0.35
DENND1B-201ENST00000235453 INSRP06213 1382 aa12.89□□□□□ -0.35
DENND1B-201ENST00000235453 SPATA31E1Q6ZUB1 1445 aa12.89□□□□□ -0.35
DENND1B-201ENST00000235453 CNGB1Q14028 1251 aaPredicted RBP12.88□□□□□ -0.35
DENND1B-201ENST00000235453 PNISRQ8TF01 805 aaKnown RBP12.88□□□□□ -0.35
DENND1B-201ENST00000235453 ANTXR1Q9H6X2 564 aa12.88□□□□□ -0.35
DENND1B-201ENST00000235453 CCDC144AA2RUR9 1427 aa12.88□□□□□ -0.35
DENND1B-201ENST00000235453 CHD1O14646 1710 aa12.88□□□□□ -0.35
DENND1B-201ENST00000235453 RIPK4P57078 832 aa12.88□□□□□ -0.35
DENND1B-201ENST00000235453 BECN1Q14457 450 aa12.88□□□□□ -0.35
DENND1B-201ENST00000235453 KIAA1211Q6ZU35 1233 aa12.88□□□□□ -0.35
DENND1B-201ENST00000235453 CENPQQ7L2Z9 268 aaPredicted RBP12.88□□□□□ -0.35
DENND1B-201ENST00000235453 C14orf37Q86TY3 774 aa12.88□□□□□ -0.35
DENND1B-201ENST00000235453 ERBB4Q15303 1308 aa12.88□□□□□ -0.35
DENND1B-201ENST00000235453 GCC2Q8IWJ2 1684 aa12.88□□□□□ -0.35
DENND1B-201ENST00000235453 CARMIL2Q6F5E8 1435 aa12.88□□□□□ -0.35
DENND1B-201ENST00000235453 MIA2Q96PC5 1412 aa12.88□□□□□ -0.35
DENND1B-201ENST00000235453 ZMYM4Q5VZL5 1548 aa12.88□□□□□ -0.35
DENND1B-201ENST00000235453 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.87□□□□□ -0.35
DENND1B-201ENST00000235453 KIF20AO95235 890 aa12.87□□□□□ -0.35
DENND1B-201ENST00000235453 DENND4BO75064 1496 aaPredicted RBP12.87□□□□□ -0.35
DENND1B-201ENST00000235453 FOXD1Q16676 465 aa12.86□□□□□ -0.35
DENND1B-201ENST00000235453 PANK2Q9BZ23 570 aa12.86□□□□□ -0.35
DENND1B-201ENST00000235453 DAPK1P53355 1430 aa12.85□□□□□ -0.35
DENND1B-201ENST00000235453 TROQ12816 1431 aaPredicted RBP12.85□□□□□ -0.35
DENND1B-201ENST00000235453 ARID4BQ4LE39 1312 aaPredicted RBP12.85□□□□□ -0.35
DENND1B-201ENST00000235453 VGFO15240 615 aaPredicted RBP12.85□□□□□ -0.35
DENND1B-201ENST00000235453 ZNF777Q9ULD5 760 aaPredicted RBP12.85□□□□□ -0.35
DENND1B-201ENST00000235453 ABCC5O15440 1437 aa12.85□□□□□ -0.35
DENND1B-201ENST00000235453 GTPBP4Q9BZE4 634 aaKnown RBP12.84□□□□□ -0.35
DENND1B-201ENST00000235453 GRPEL1Q9HAV7 217 aa12.84□□□□□ -0.35
DENND1B-201ENST00000235453 SCAPERQ9BY12 1400 aa12.83□□□□□ -0.35
DENND1B-201ENST00000235453 TAF3Q5VWG9 929 aa12.83□□□□□ -0.36
DENND1B-201ENST00000235453 ABCA8O94911 1581 aa12.83□□□□□ -0.36
DENND1B-201ENST00000235453 DNMT1P26358 1616 aaKnown RBP12.83□□□□□ -0.36
DENND1B-201ENST00000235453 KIF7Q2M1P5 1343 aa12.82□□□□□ -0.36
DENND1B-201ENST00000235453 GPATCH8Q9UKJ3 1502 aaKnown RBP12.82□□□□□ -0.36
DENND1B-201ENST00000235453 TRIM44Q96DX7 344 aaPredicted RBP12.82□□□□□ -0.36
DENND1B-201ENST00000235453 ATP10BO94823 1461 aa12.82□□□□□ -0.36
DENND1B-201ENST00000235453 BRD4O60885 1362 aaPredicted RBP12.82□□□□□ -0.36
DENND1B-201ENST00000235453 USP19O94966 1318 aa12.82□□□□□ -0.36
DENND1B-201ENST00000235453 CFDP1Q9UEE9 299 aaPredicted RBP12.81□□□□□ -0.36
DENND1B-201ENST00000235453 ROCK2O75116 1388 aaKnown RBP12.81□□□□□ -0.36
DENND1B-201ENST00000235453 CAMSAP2Q08AD1 1489 aa12.81□□□□□ -0.36
DENND1B-201ENST00000235453 DYNC1I1O14576 645 aa12.81□□□□□ -0.36
DENND1B-201ENST00000235453 MCM4P33991 863 aa12.81□□□□□ -0.36
DENND1B-201ENST00000235453 ERCC6L2Q5T890 1561 aa12.81□□□□□ -0.36
DENND1B-201ENST00000235453 TNNT2P45379 298 aaPredicted RBP12.8□□□□□ -0.36
DENND1B-201ENST00000235453 HS1BP3Q53T59 392 aa12.8□□□□□ -0.36
DENND1B-201ENST00000235453 PPP1R9BQ96SB3 815 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms