RNA–Protein interactions for RNA: ENST00000233838.8

GGCX-201, Transcript of gamma-glutamyl carboxylase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGCX, Length 7,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-201ENST00000233838 USP35Q9P2H5 1018 aa9.91□□□□□ -0.82
GGCX-201ENST00000233838 EIF3AQ14152 1382 aaKnown RBP9.9□□□□□ -0.82
GGCX-201ENST00000233838 H3BQV1 296 aa9.9□□□□□ -0.82
GGCX-201ENST00000233838 SETQ01105 290 aaPredicted RBP9.9□□□□□ -0.82
GGCX-201ENST00000233838 IFFO2Q5TF58 517 aa9.9□□□□□ -0.82
GGCX-201ENST00000233838 NUTM2DQ5VT03 806 aaPredicted RBP9.9□□□□□ -0.82
GGCX-201ENST00000233838 LTV1Q96GA3 475 aaPredicted RBP9.9□□□□□ -0.82
GGCX-201ENST00000233838 PATL2C9JE40 543 aaKnown RBP9.9□□□□□ -0.82
GGCX-201ENST00000233838 TCERG1O14776 1098 aaKnown RBP9.9□□□□□ -0.82
GGCX-201ENST00000233838 SETD5Q9C0A6 1442 aa9.9□□□□□ -0.83
GGCX-201ENST00000233838 RALBP1Q15311 655 aa9.89□□□□□ -0.83
GGCX-201ENST00000233838 GTF2E1P29083 439 aaPredicted RBP9.89□□□□□ -0.83
GGCX-201ENST00000233838 CLUAP1Q96AJ1 413 aa9.89□□□□□ -0.83
GGCX-201ENST00000233838 CCAR2Q8N163 923 aaKnown RBP9.88□□□□□ -0.83
GGCX-201ENST00000233838 ST18O60284 1047 aa9.88□□□□□ -0.83
GGCX-201ENST00000233838 TPM2P07951 284 aa9.88□□□□□ -0.83
GGCX-201ENST00000233838 AMPHP49418 695 aa9.88□□□□□ -0.83
GGCX-201ENST00000233838 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.88□□□□□ -0.83
GGCX-201ENST00000233838 RAD21O60216 631 aa9.87□□□□□ -0.83
GGCX-201ENST00000233838 TSR1Q2NL82 804 aaKnown RBP9.87□□□□□ -0.83
GGCX-201ENST00000233838 RILPL2Q969X0 211 aa9.87□□□□□ -0.83
GGCX-201ENST00000233838 SMARCA4P51532 1647 aa9.87□□□□□ -0.83
GGCX-201ENST00000233838 NGDNQ8NEJ9 315 aaKnown RBP9.87□□□□□ -0.83
GGCX-201ENST00000233838 CHMP4AQ9BY43 222 aa9.87□□□□□ -0.83
GGCX-201ENST00000233838 HDAC5Q9UQL6 1122 aa9.87□□□□□ -0.83
GGCX-201ENST00000233838 TCEAL9Q9UHQ7 104 aa9.87□□□□□ -0.83
GGCX-201ENST00000233838 CUX2O14529 1486 aa9.86□□□□□ -0.83
GGCX-201ENST00000233838 KRI1Q8N9T8 703 aaKnown RBP9.86□□□□□ -0.83
GGCX-201ENST00000233838 FOXD4L6Q3SYB3 417 aaPredicted RBP9.86□□□□□ -0.83
GGCX-201ENST00000233838 FOXD4L3Q6VB84 417 aaPredicted RBP9.86□□□□□ -0.83
GGCX-201ENST00000233838 FAM184AQ8NB25 1140 aa9.86□□□□□ -0.83
GGCX-201ENST00000233838 CENPJQ9HC77 1338 aaPredicted RBP9.86□□□□□ -0.83
GGCX-201ENST00000233838 CARMIL1Q5VZK9 1371 aa9.85□□□□□ -0.83
GGCX-201ENST00000233838 AKAP17AQ02040 695 aaKnown RBP9.85□□□□□ -0.83
GGCX-201ENST00000233838 TIMELESSQ9UNS1 1208 aa9.85□□□□□ -0.83
GGCX-201ENST00000233838 NUTM2FA1L443 756 aa9.85□□□□□ -0.83
GGCX-201ENST00000233838 TRIM34Q9BYJ4 488 aa9.85□□□□□ -0.83
GGCX-201ENST00000233838 TERF2IPQ9NYB0 399 aa9.85□□□□□ -0.83
GGCX-201ENST00000233838 KIF3AQ9Y496 699 aa9.85□□□□□ -0.83
GGCX-201ENST00000233838 PCMTD1Q96MG8 357 aaPredicted RBP9.84□□□□□ -0.83
GGCX-201ENST00000233838 IPO9Q96P70 1041 aaKnown RBP9.84□□□□□ -0.83
GGCX-201ENST00000233838 GOLGA6L19H0YKK7 550 aa9.84□□□□□ -0.83
GGCX-201ENST00000233838 MSH5O43196 834 aa9.84□□□□□ -0.83
GGCX-201ENST00000233838 CTDP1Q9Y5B0 961 aaPredicted RBP9.84□□□□□ -0.83
GGCX-201ENST00000233838 LMOD3Q0VAK6 560 aa9.84□□□□□ -0.83
GGCX-201ENST00000233838 EID1Q9Y6B2 187 aa9.83□□□□□ -0.84
GGCX-201ENST00000233838 MCTP1Q6DN14 999 aa9.83□□□□□ -0.84
GGCX-201ENST00000233838 DDX11L8A8MPP1 907 aa9.83□□□□□ -0.84
GGCX-201ENST00000233838 CCDC70Q6NSX1 233 aa9.83□□□□□ -0.84
GGCX-201ENST00000233838 TPM1P09493 284 aa9.83□□□□□ -0.84
GGCX-201ENST00000233838 FBXW7Q969H0 707 aa9.82□□□□□ -0.84
GGCX-201ENST00000233838 NUP155O75694 1391 aa9.82□□□□□ -0.84
GGCX-201ENST00000233838 RRP7AQ9Y3A4 280 aaKnown RBP9.82□□□□□ -0.84
GGCX-201ENST00000233838 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.82□□□□□ -0.84
GGCX-201ENST00000233838 ZNF592Q92610 1267 aa9.82□□□□□ -0.84
GGCX-201ENST00000233838 MPHOSPH9Q99550 1183 aa9.82□□□□□ -0.84
GGCX-201ENST00000233838 SYNE3Q6ZMZ3 975 aa9.82□□□□□ -0.84
GGCX-201ENST00000233838 NGEFQ8N5V2 710 aa9.82□□□□□ -0.84
GGCX-201ENST00000233838 NOL10Q9BSC4 688 aaKnown RBP9.81□□□□□ -0.84
GGCX-201ENST00000233838 AMOTL1Q8IY63 956 aa9.81□□□□□ -0.84
GGCX-201ENST00000233838 ANKRD45Q5TZF3 282 aa9.81□□□□□ -0.84
GGCX-201ENST00000233838 CNKSR2Q8WXI2 1034 aa9.81□□□□□ -0.84
GGCX-201ENST00000233838 EVA1CP58658 441 aa9.81□□□□□ -0.84
GGCX-201ENST00000233838 C1orf141Q5JVX7 400 aa9.81□□□□□ -0.84
GGCX-201ENST00000233838 BECN2A8MW95 431 aa9.8□□□□□ -0.84
GGCX-201ENST00000233838 TRIM29Q14134 588 aa9.79□□□□□ -0.84
GGCX-201ENST00000233838 GPS2Q13227 327 aa9.79□□□□□ -0.84
GGCX-201ENST00000233838 ANO2Q9NQ90 1003 aa9.79□□□□□ -0.84
GGCX-201ENST00000233838 CARMIL2Q6F5E8 1435 aa9.79□□□□□ -0.84
GGCX-201ENST00000233838 ZNF771Q7L3S4 317 aaPredicted RBP9.79□□□□□ -0.84
GGCX-201ENST00000233838 ANKRD30AQ9BXX3 1397 aa9.79□□□□□ -0.84
GGCX-201ENST00000233838 HSP90AA2PQ14568 343 aaPredicted RBP9.78□□□□□ -0.84
GGCX-201ENST00000233838 KIF3BO15066 747 aa9.78□□□□□ -0.84
GGCX-201ENST00000233838 DDX49Q9Y6V7 483 aaKnown RBP9.78□□□□□ -0.84
GGCX-201ENST00000233838 DHX16O60231 1041 aaKnown RBP9.78□□□□□ -0.84
GGCX-201ENST00000233838 ELL2O00472 640 aaPredicted RBP9.78□□□□□ -0.84
GGCX-201ENST00000233838 CWC22Q9HCG8 908 aaKnown RBP9.77□□□□□ -0.84
GGCX-201ENST00000233838 SLC4A3P48751 1232 aa9.77□□□□□ -0.85
GGCX-201ENST00000233838 HNRNPMP52272 730 aaKnown RBP eCLIP9.77□□□□□ -0.85
GGCX-201ENST00000233838 DIAPH3Q9NSV4 1193 aa9.77□□□□□ -0.85
GGCX-201ENST00000233838 APPP05067 770 aa9.77□□□□□ -0.85
GGCX-201ENST00000233838 BCL2L13Q9BXK5 485 aa9.77□□□□□ -0.85
GGCX-201ENST00000233838 FOSBP53539 338 aa9.77□□□□□ -0.85
GGCX-201ENST00000233838 TRAK1Q9UPV9 953 aa9.77□□□□□ -0.85
GGCX-201ENST00000233838 RAB3GAP2Q9H2M9 1393 aa9.77□□□□□ -0.85
GGCX-201ENST00000233838 EIF2S2P20042 333 aaKnown RBP9.76□□□□□ -0.85
GGCX-201ENST00000233838 CCDC47Q96A33 483 aaKnown RBP9.76□□□□□ -0.85
GGCX-201ENST00000233838 NECTIN2Q92692 538 aa9.76□□□□□ -0.85
GGCX-201ENST00000233838 ATP6V1DQ9Y5K8 247 aa9.76□□□□□ -0.85
GGCX-201ENST00000233838 WASHC2CQ9Y4E1 1318 aa9.76□□□□□ -0.85
GGCX-201ENST00000233838 FMN1Q68DA7 1419 aa9.76□□□□□ -0.85
GGCX-201ENST00000233838 VPS37DQ86XT2 251 aa9.76□□□□□ -0.85
GGCX-201ENST00000233838 MEX3CQ5U5Q3 659 aaKnown RBP9.75□□□□□ -0.85
GGCX-201ENST00000233838 CHMP4CQ96CF2 233 aa9.75□□□□□ -0.85
GGCX-201ENST00000233838 SAMD1Q6SPF0 538 aaPredicted RBP9.75□□□□□ -0.85
GGCX-201ENST00000233838 NFXL1Q6ZNB6 911 aa9.75□□□□□ -0.85
GGCX-201ENST00000233838 TTC5Q8N0Z6 440 aa9.75□□□□□ -0.85
GGCX-201ENST00000233838 PLIN1O60240 522 aa9.75□□□□□ -0.85
GGCX-201ENST00000233838 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.75□□□□□ -0.853e-10■■■■■ 153.8
GGCX-201ENST00000233838 KIF15Q9NS87 1388 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms