RNA–Protein interactions for RNA: ENST00000225308.12

SLC25A39-201, Transcript of solute carrier family 25 member 39, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC25A39, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A39-201ENST00000225308 ANKRD50Q9ULJ7 1429 aa33.02■■■□□ 2.88
SLC25A39-201ENST00000225308 DEPDC5O75140 1603 aa33.02■■■□□ 2.88
SLC25A39-201ENST00000225308 CLTCQ00610 1675 aaKnown RBP33.02■■■□□ 2.88
SLC25A39-201ENST00000225308 MROH2AA6NES4 1674 aa32.99■■■□□ 2.87
SLC25A39-201ENST00000225308 CNTLNQ9NXG0 1405 aa32.99■■■□□ 2.87
SLC25A39-201ENST00000225308 PRDM15P57071 1507 aaPredicted RBP32.98■■■□□ 2.87
SLC25A39-201ENST00000225308 PPP6R1Q9UPN7 881 aa32.98■■■□□ 2.87
SLC25A39-201ENST00000225308 FAM135AQ9P2D6 1515 aa32.98■■■□□ 2.87
SLC25A39-201ENST00000225308 AEBP2Q6ZN18 517 aaPredicted RBP32.97■■■□□ 2.87
SLC25A39-201ENST00000225308 KDM5DQ9BY66 1539 aa32.96■■■□□ 2.87
SLC25A39-201ENST00000225308 C3P01024 1663 aa32.96■■■□□ 2.87
SLC25A39-201ENST00000225308 ESF1Q9H501 851 aaKnown RBP32.96■■■□□ 2.87
SLC25A39-201ENST00000225308 GCC2Q8IWJ2 1684 aa32.96■■■□□ 2.87
SLC25A39-201ENST00000225308 ZC3H13Q5T200 1668 aaKnown RBP32.92■■■□□ 2.86
SLC25A39-201ENST00000225308 NAIPQ13075 1403 aa32.92■■■□□ 2.86
SLC25A39-201ENST00000225308 ABCC3O15438 1527 aa32.9■■■□□ 2.86
SLC25A39-201ENST00000225308 CEP152O94986 1710 aa32.9■■■□□ 2.86
SLC25A39-201ENST00000225308 HFM1A2PYH4 1435 aa32.9■■■□□ 2.86
SLC25A39-201ENST00000225308 WASHC2CQ9Y4E1 1318 aa32.88■■■□□ 2.85
SLC25A39-201ENST00000225308 CEBPAP49715 358 aaPredicted RBP32.88■■■□□ 2.85
SLC25A39-201ENST00000225308 ZMYM3Q14202 1370 aa32.87■■■□□ 2.85
SLC25A39-201ENST00000225308 UNC13BO14795 1591 aa32.87■■■□□ 2.85
SLC25A39-201ENST00000225308 VWDEQ8N2E2 1590 aa32.86■■■□□ 2.85
SLC25A39-201ENST00000225308 PLPPR3Q6T4P5 718 aa32.85■■■□□ 2.85
SLC25A39-201ENST00000225308 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.83■■■□□ 2.852e-8■□□□□ 10.4
SLC25A39-201ENST00000225308 CAMSAP1Q5T5Y3 1602 aa32.81■■■□□ 2.84
SLC25A39-201ENST00000225308 SETD1BQ9UPS6 1966 aaKnown RBP32.8■■■□□ 2.84
SLC25A39-201ENST00000225308 KANK1Q14678 1352 aa32.79■■■□□ 2.84
SLC25A39-201ENST00000225308 LMTK2Q8IWU2 1503 aa32.77■■■□□ 2.84
SLC25A39-201ENST00000225308 PZPP20742 1482 aa32.77■■■□□ 2.84
SLC25A39-201ENST00000225308 NPATQ14207 1427 aa32.74■■■□□ 2.83
SLC25A39-201ENST00000225308 IQGAP3Q86VI3 1631 aa32.73■■■□□ 2.83
SLC25A39-201ENST00000225308 CFAP65Q6ZU64 1925 aaKnown RBP32.72■■■□□ 2.83
SLC25A39-201ENST00000225308 PREX1Q8TCU6 1659 aa32.71■■■□□ 2.83
SLC25A39-201ENST00000225308 EFCAB6Q5THR3 1501 aa32.69■■■□□ 2.82
SLC25A39-201ENST00000225308 TET3O43151 1660 aa32.69■■■□□ 2.82
SLC25A39-201ENST00000225308 ARHGAP31Q2M1Z3 1444 aa32.69■■■□□ 2.82
SLC25A39-201ENST00000225308 NUP155O75694 1391 aa32.67■■■□□ 2.82
SLC25A39-201ENST00000225308 FBXO31Q5XUX0 539 aaPredicted RBP32.66■■■□□ 2.82
SLC25A39-201ENST00000225308 LMTK3Q96Q04 1460 aa32.65■■■□□ 2.82
SLC25A39-201ENST00000225308 SETD5Q9C0A6 1442 aa32.63■■■□□ 2.81
SLC25A39-201ENST00000225308 SPATA31D1Q6ZQQ2 1576 aa32.63■■■□□ 2.81
SLC25A39-201ENST00000225308 ERVK-7P63135 1459 aa32.62■■■□□ 2.81
SLC25A39-201ENST00000225308 MYO3AQ8NEV4 1616 aa32.62■■■□□ 2.81
SLC25A39-201ENST00000225308 E9PCH4 1651 aa32.59■■■□□ 2.81
SLC25A39-201ENST00000225308 UHRF1BP1Q6BDS2 1440 aa32.59■■■□□ 2.81
SLC25A39-201ENST00000225308 TNRQ92752 1358 aa32.57■■■□□ 2.8
SLC25A39-201ENST00000225308 RPRD2Q5VT52 1461 aaKnown RBP32.57■■■□□ 2.8
SLC25A39-201ENST00000225308 ZNF142P52746 1687 aaPredicted RBP32.56■■■□□ 2.8
SLC25A39-201ENST00000225308 RAB3GAP2Q9H2M9 1393 aa32.55■■■□□ 2.8
SLC25A39-201ENST00000225308 TRIM52Q96A61 297 aa32.51■■■□□ 2.8
SLC25A39-201ENST00000225308 CEP170BQ9Y4F5 1589 aaPredicted RBP32.51■■■□□ 2.8
SLC25A39-201ENST00000225308 NOS1P29475 1434 aa32.5■■■□□ 2.79
SLC25A39-201ENST00000225308 SYNMO15061 1565 aa32.5■■■□□ 2.79
SLC25A39-201ENST00000225308 TRIM26Q12899 539 aaPredicted RBP32.48■■■□□ 2.79
SLC25A39-201ENST00000225308 NLRP1Q9C000 1473 aa32.47■■■□□ 2.79
SLC25A39-201ENST00000225308 A2ML1A8K2U0 1454 aa32.46■■■□□ 2.79
SLC25A39-201ENST00000225308 HSPA2P54652 639 aa32.44■■■□□ 2.78
SLC25A39-201ENST00000225308 ACIN1Q9UKV3 1341 aaKnown RBP32.41■■■□□ 2.78
SLC25A39-201ENST00000225308 SPHKAPQ2M3C7 1700 aa32.41■■■□□ 2.78
SLC25A39-201ENST00000225308 SLC4A1APQ9BWU0 796 aaKnown RBP32.4■■■□□ 2.78
SLC25A39-201ENST00000225308 PIK3C2BO00750 1634 aa32.37■■■□□ 2.77
SLC25A39-201ENST00000225308 UGGT1Q9NYU2 1555 aa32.37■■■□□ 2.77
SLC25A39-201ENST00000225308 HRCP23327 699 aa32.37■■■□□ 2.77
SLC25A39-201ENST00000225308 PKD2Q13563 968 aa32.37■■■□□ 2.77
SLC25A39-201ENST00000225308 UBR1Q8IWV7 1749 aa32.35■■■□□ 2.77
SLC25A39-201ENST00000225308 PTPRTO14522 1441 aa32.34■■■□□ 2.77
SLC25A39-201ENST00000225308 MPHOSPH9Q99550 1183 aa32.33■■■□□ 2.77
SLC25A39-201ENST00000225308 IDI1Q13907 227 aa32.31■■■□□ 2.76
SLC25A39-201ENST00000225308 STRCQ7RTU9 1775 aa32.31■■■□□ 2.76
SLC25A39-201ENST00000225308 KDM5AP29375 1690 aaKnown RBP32.31■■■□□ 2.76
SLC25A39-201ENST00000225308 SLC52A1Q9NWF4 448 aa32.3■■■□□ 2.76
SLC25A39-201ENST00000225308 TRPM2O94759 1503 aa32.29■■■□□ 2.76
SLC25A39-201ENST00000225308 PLA2R1Q13018 1463 aa32.28■■■□□ 2.76
SLC25A39-201ENST00000225308 ADGRB3O60242 1522 aa32.26■■■□□ 2.76
SLC25A39-201ENST00000225308 FOXD1Q16676 465 aa32.26■■■□□ 2.75
SLC25A39-201ENST00000225308 MYO5BQ9ULV0 1848 aa32.25■■■□□ 2.75
SLC25A39-201ENST00000225308 CLTCL1P53675 1640 aa32.23■■■□□ 2.75
SLC25A39-201ENST00000225308 THEMISQ8N1K5 641 aaPredicted RBP32.23■■■□□ 2.75
SLC25A39-201ENST00000225308 TMEM131LA2VDJ0 1609 aa32.22■■■□□ 2.75
SLC25A39-201ENST00000225308 POLR1AO95602 1720 aaPredicted RBP32.2■■■□□ 2.74
SLC25A39-201ENST00000225308 SLIT1O75093 1534 aa32.17■■■□□ 2.74
SLC25A39-201ENST00000225308 STAG3Q9UJ98 1225 aa32.17■■■□□ 2.74
SLC25A39-201ENST00000225308 ARHGAP23Q9P227 1491 aa32.16■■■□□ 2.74
SLC25A39-201ENST00000225308 NEURL4Q96JN8 1562 aa32.13■■■□□ 2.73
SLC25A39-201ENST00000225308 KIF1BO60333 1816 aa32.13■■■□□ 2.73
SLC25A39-201ENST00000225308 TMEM2Q9UHN6 1383 aa32.12■■■□□ 2.73
SLC25A39-201ENST00000225308 NCKAP5LQ9HCH0 1330 aa32.12■■■□□ 2.73
SLC25A39-201ENST00000225308 CCDC144AA2RUR9 1427 aa32.08■■■□□ 2.73
SLC25A39-201ENST00000225308 CHGAP10645 457 aaKnown RBP32.08■■■□□ 2.73
SLC25A39-201ENST00000225308 ANKLE2Q86XL3 938 aa32.08■■■□□ 2.73
SLC25A39-201ENST00000225308 SCAF11Q99590 1463 aaKnown RBP32.07■■■□□ 2.72
SLC25A39-201ENST00000225308 PCGF6Q9BYE7 350 aa32.06■■■□□ 2.72
SLC25A39-201ENST00000225308 ZFYVE9O95405 1425 aa32.05■■■□□ 2.72
SLC25A39-201ENST00000225308 LTKP29376 864 aa32.04■■■□□ 2.72
SLC25A39-201ENST00000225308 ANKRD30BQ9BXX2 1392 aa32.04■■■□□ 2.72
SLC25A39-201ENST00000225308 MED14O60244 1454 aa32.04■■■□□ 2.72
SLC25A39-201ENST00000225308 DMRT2Q9Y5R5 561 aa32.02■■■□□ 2.72
SLC25A39-201ENST00000225308 IQGAP1P46940 1657 aa32.01■■■□□ 2.71
SLC25A39-201ENST00000225308 TXNDC2Q86VQ3 553 aa32■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms