RNA–Protein interactions for RNA: ENST00000224949.8

PITRM1-201, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PITRM1, Length 3,450 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-201ENST00000224949 ANKRD50Q9ULJ7 1429 aa16.61■□□□□ 0.25
PITRM1-201ENST00000224949 PDE3BQ13370 1112 aa16.61■□□□□ 0.25
PITRM1-201ENST00000224949 NFKBIBQ15653 356 aa16.6■□□□□ 0.25
PITRM1-201ENST00000224949 NBPF1Q3BBV0 1214 aa16.6■□□□□ 0.25
PITRM1-201ENST00000224949 CAMSAP2Q08AD1 1489 aa16.6■□□□□ 0.25
PITRM1-201ENST00000224949 KDM5CP41229 1560 aa16.59■□□□□ 0.25
PITRM1-201ENST00000224949 GSE1Q14687 1217 aa16.59■□□□□ 0.25
PITRM1-201ENST00000224949 MBD5Q9P267 1494 aa16.58■□□□□ 0.24
PITRM1-201ENST00000224949 KIF21AQ7Z4S6 1674 aa16.58■□□□□ 0.24
PITRM1-201ENST00000224949 PANK3Q9H999 370 aa16.57■□□□□ 0.24
PITRM1-201ENST00000224949 KIF14Q15058 1648 aa16.56■□□□□ 0.24
PITRM1-201ENST00000224949 HNRNPMP52272 730 aaKnown RBP eCLIP16.56■□□□□ 0.24
PITRM1-201ENST00000224949 FRAT1Q92837 279 aaPredicted RBP16.56■□□□□ 0.24
PITRM1-201ENST00000224949 NUP153P49790 1475 aaKnown RBP16.56■□□□□ 0.24
PITRM1-201ENST00000224949 RALGAPBQ86X10 1494 aa16.55■□□□□ 0.24
PITRM1-201ENST00000224949 WDR43Q15061 677 aaKnown RBP eCLIP16.54■□□□□ 0.24
PITRM1-201ENST00000224949 ADAMTS8Q9UP79 889 aa16.53■□□□□ 0.24
PITRM1-201ENST00000224949 PLEKHD1A6NEE1 506 aa16.52■□□□□ 0.23
PITRM1-201ENST00000224949 ARXQ96QS3 562 aa16.51■□□□□ 0.23
PITRM1-201ENST00000224949 TROQ12816 1431 aaPredicted RBP16.51■□□□□ 0.23
PITRM1-201ENST00000224949 FRAT2O75474 233 aaPredicted RBP16.51■□□□□ 0.23
PITRM1-201ENST00000224949 KIAA0586Q9BVV6 1533 aa16.5■□□□□ 0.23
PITRM1-201ENST00000224949 WASHC2CQ9Y4E1 1318 aa16.5■□□□□ 0.23
PITRM1-201ENST00000224949 GPATCH8Q9UKJ3 1502 aaKnown RBP16.49■□□□□ 0.23
PITRM1-201ENST00000224949 PARD3Q8TEW0 1356 aa16.49■□□□□ 0.23
PITRM1-201ENST00000224949 PLB1Q6P1J6 1458 aa16.49■□□□□ 0.23
PITRM1-201ENST00000224949 CCDC146Q8IYE0 955 aa16.49■□□□□ 0.23
PITRM1-201ENST00000224949 PER1O15534 1290 aaPredicted RBP16.48■□□□□ 0.23
PITRM1-201ENST00000224949 FAM161AQ3B820 660 aa16.48■□□□□ 0.23
PITRM1-201ENST00000224949 CHMP7Q8WUX9 453 aaPredicted RBP16.48■□□□□ 0.23
PITRM1-201ENST00000224949 CENPQQ7L2Z9 268 aaPredicted RBP16.47■□□□□ 0.23
PITRM1-201ENST00000224949 UHRF1BP1Q6BDS2 1440 aa16.47■□□□□ 0.23
PITRM1-201ENST00000224949 C9orf84Q5VXU9 1444 aa16.46■□□□□ 0.23
PITRM1-201ENST00000224949 DISP3Q9P2K9 1392 aa16.46■□□□□ 0.23
PITRM1-201ENST00000224949 TMF1P82094 1093 aa16.46■□□□□ 0.22
PITRM1-201ENST00000224949 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.45■□□□□ 0.22
PITRM1-201ENST00000224949 KNSTRNQ9Y448 316 aa16.45■□□□□ 0.22
PITRM1-201ENST00000224949 RAPGEF6Q8TEU7 1601 aa16.45■□□□□ 0.22
PITRM1-201ENST00000224949 PBRM1Q86U86 1689 aa16.44■□□□□ 0.22
PITRM1-201ENST00000224949 CCDC144AA2RUR9 1427 aa16.44■□□□□ 0.22
PITRM1-201ENST00000224949 DISP1Q96F81 1524 aa16.44■□□□□ 0.22
PITRM1-201ENST00000224949 TARBP1Q13395 1621 aaKnown RBP16.44■□□□□ 0.22
PITRM1-201ENST00000224949 ADAMTS12P58397 1594 aa16.44■□□□□ 0.22
PITRM1-201ENST00000224949 ZNF608Q9ULD9 1512 aaPredicted RBP16.43■□□□□ 0.22
PITRM1-201ENST00000224949 CANXP27824 592 aaKnown RBP16.43■□□□□ 0.22
PITRM1-201ENST00000224949 GOLGA2Q08379 1002 aa16.43■□□□□ 0.22
PITRM1-201ENST00000224949 C8orf34Q49A92 452 aa16.43■□□□□ 0.22
PITRM1-201ENST00000224949 SLKQ9H2G2 1235 aaPredicted RBP16.43■□□□□ 0.22
PITRM1-201ENST00000224949 KIAA0556O60303 1618 aa16.42■□□□□ 0.22
PITRM1-201ENST00000224949 DUSP27Q5VZP5 1158 aa16.4■□□□□ 0.22
PITRM1-201ENST00000224949 KDM2BQ8NHM5 1336 aa16.4■□□□□ 0.22
PITRM1-201ENST00000224949 PLEKHH1Q9ULM0 1364 aa16.39■□□□□ 0.21
PITRM1-201ENST00000224949 BCAR3O75815 825 aa16.39■□□□□ 0.21
PITRM1-201ENST00000224949 ADGBQ8N7X0 1667 aa16.39■□□□□ 0.21
PITRM1-201ENST00000224949 ADGRL2O95490 1459 aa16.38■□□□□ 0.21
PITRM1-201ENST00000224949 TESK2Q96S53 571 aa16.38■□□□□ 0.21
PITRM1-201ENST00000224949 ARHGEF12Q9NZN5 1544 aa16.38■□□□□ 0.21
PITRM1-201ENST00000224949 PPP2R1AP30153 589 aa16.38■□□□□ 0.21
PITRM1-201ENST00000224949 APAF1O14727 1248 aa16.37■□□□□ 0.21
PITRM1-201ENST00000224949 PRAG1Q86YV5 1406 aa16.37■□□□□ 0.21
PITRM1-201ENST00000224949 NEUROD2Q15784 382 aa16.36■□□□□ 0.21
PITRM1-201ENST00000224949 JPH4Q96JJ6 628 aa16.36■□□□□ 0.21
PITRM1-201ENST00000224949 ERBINQ96RT1 1412 aa16.36■□□□□ 0.21
PITRM1-201ENST00000224949 ITSN2Q9NZM3 1697 aa16.36■□□□□ 0.21
PITRM1-201ENST00000224949 SPRYD3Q8NCJ5 442 aa16.35■□□□□ 0.21
PITRM1-201ENST00000224949 BLMP54132 1417 aaPredicted RBP16.35■□□□□ 0.21
PITRM1-201ENST00000224949 SPINK5Q9NQ38 1064 aaPredicted RBP16.33■□□□□ 0.21
PITRM1-201ENST00000224949 POGKQ9P215 609 aa16.33■□□□□ 0.21
PITRM1-201ENST00000224949 COG6Q9Y2V7 657 aa16.32■□□□□ 0.2
PITRM1-201ENST00000224949 ZMYM4Q5VZL5 1548 aa16.31■□□□□ 0.2
PITRM1-201ENST00000224949 IGHDP01880 384 aa16.31■□□□□ 0.2
PITRM1-201ENST00000224949 COL17A1Q9UMD9 1497 aaPredicted RBP16.31■□□□□ 0.2
PITRM1-201ENST00000224949 PANK1Q8TE04 598 aa16.31■□□□□ 0.2
PITRM1-201ENST00000224949 GRIN2AQ12879 1464 aa16.3■□□□□ 0.2
PITRM1-201ENST00000224949 SEC24BO95487 1268 aa16.3■□□□□ 0.2
PITRM1-201ENST00000224949 E9PCH4 1651 aa16.3■□□□□ 0.2
PITRM1-201ENST00000224949 SLFN5Q08AF3 891 aa16.3■□□□□ 0.2
PITRM1-201ENST00000224949 CARMIL2Q6F5E8 1435 aa16.3■□□□□ 0.2
PITRM1-201ENST00000224949 TNNT2P45379 298 aaPredicted RBP16.29■□□□□ 0.2
PITRM1-201ENST00000224949 FAM135AQ9P2D6 1515 aa16.28■□□□□ 0.2
PITRM1-201ENST00000224949 BECN1Q14457 450 aa16.28■□□□□ 0.2
PITRM1-201ENST00000224949 CEP170Q5SW79 1584 aa16.28■□□□□ 0.2
PITRM1-201ENST00000224949 CROCC2H7BZ55 1655 aa16.28■□□□□ 0.2
PITRM1-201ENST00000224949 KDM5DQ9BY66 1539 aa16.28■□□□□ 0.2
PITRM1-201ENST00000224949 BCL2L13Q9BXK5 485 aa16.27■□□□□ 0.2
PITRM1-201ENST00000224949 GZF1Q9H116 711 aaPredicted RBP16.27■□□□□ 0.2
PITRM1-201ENST00000224949 A2MP01023 1474 aa16.27■□□□□ 0.2
PITRM1-201ENST00000224949 PLEKHH2Q8IVE3 1493 aa16.27■□□□□ 0.19
PITRM1-201ENST00000224949 RRP7AQ9Y3A4 280 aaKnown RBP16.27■□□□□ 0.19
PITRM1-201ENST00000224949 MAGI1Q96QZ7 1491 aaPredicted RBP16.26■□□□□ 0.19
PITRM1-201ENST00000224949 DMRT2Q9Y5R5 561 aa16.26■□□□□ 0.19
PITRM1-201ENST00000224949 CLUAP1Q96AJ1 413 aa16.25■□□□□ 0.19
PITRM1-201ENST00000224949 MRC2Q9UBG0 1479 aa16.25■□□□□ 0.19
PITRM1-201ENST00000224949 UPF2Q9HAU5 1272 aaKnown RBP16.25■□□□□ 0.19
PITRM1-201ENST00000224949 AMER1Q5JTC6 1135 aaPredicted RBP16.24■□□□□ 0.19
PITRM1-201ENST00000224949 TRPM1Q7Z4N2 1603 aa16.23■□□□□ 0.19
PITRM1-201ENST00000224949 CENPJQ9HC77 1338 aaPredicted RBP16.23■□□□□ 0.19
PITRM1-201ENST00000224949 MAGI2Q86UL8 1455 aa16.22■□□□□ 0.19
PITRM1-201ENST00000224949 CDC42BPAQ5VT25 1732 aa16.22■□□□□ 0.19
PITRM1-201ENST00000224949 ATP10BO94823 1461 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms