RNA–Protein interactions for RNA: ENST00000221784.8

PDCD5-201, Transcript of programmed cell death 5, humanhuman

TSL 3

Gene PDCD5, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-201ENST00000221784 PKD2Q13563 968 aa21.64■■□□□ 1.05
PDCD5-201ENST00000221784 CAMSAP1Q5T5Y3 1602 aa21.64■■□□□ 1.05
PDCD5-201ENST00000221784 TNRQ92752 1358 aa21.6■■□□□ 1.05
PDCD5-201ENST00000221784 KDM5DQ9BY66 1539 aa21.6■■□□□ 1.05
PDCD5-201ENST00000221784 FAM135AQ9P2D6 1515 aa21.59■■□□□ 1.05
PDCD5-201ENST00000221784 PLA2R1Q13018 1463 aa21.58■■□□□ 1.05
PDCD5-201ENST00000221784 CEP170BQ9Y4F5 1589 aaPredicted RBP21.58■■□□□ 1.05
PDCD5-201ENST00000221784 A2ML1A8K2U0 1454 aa21.58■■□□□ 1.04
PDCD5-201ENST00000221784 PZPP20742 1482 aa21.58■■□□□ 1.04
PDCD5-201ENST00000221784 MAST1Q9Y2H9 1570 aa21.57■■□□□ 1.04
PDCD5-201ENST00000221784 MYO3AQ8NEV4 1616 aa21.57■■□□□ 1.04
PDCD5-201ENST00000221784 TCOF1Q13428 1488 aaKnown RBP21.54■■□□□ 1.04
PDCD5-201ENST00000221784 ABCC5O15440 1437 aa21.54■■□□□ 1.04
PDCD5-201ENST00000221784 RRP7BPQ9NSQ0 103 aa21.53■■□□□ 1.04
PDCD5-201ENST00000221784 ZNF142P52746 1687 aaPredicted RBP21.53■■□□□ 1.04
PDCD5-201ENST00000221784 LTBP4Q8N2S1 1624 aa21.52■■□□□ 1.04
PDCD5-201ENST00000221784 THEMISQ8N1K5 641 aaPredicted RBP21.52■■□□□ 1.04
PDCD5-201ENST00000221784 ZNF335Q9H4Z2 1342 aaPredicted RBP21.52■■□□□ 1.03
PDCD5-201ENST00000221784 KIF15Q9NS87 1388 aa21.5■■□□□ 1.03
PDCD5-201ENST00000221784 FGD6Q6ZV73 1430 aa21.5■■□□□ 1.03
PDCD5-201ENST00000221784 DUOX2Q9NRD8 1548 aa21.5■■□□□ 1.03
PDCD5-201ENST00000221784 ANKLE2Q86XL3 938 aa21.49■■□□□ 1.03
PDCD5-201ENST00000221784 DNMT1P26358 1616 aaKnown RBP21.48■■□□□ 1.03
PDCD5-201ENST00000221784 NLRP1Q9C000 1473 aa21.47■■□□□ 1.03
PDCD5-201ENST00000221784 ABCC3O15438 1527 aa21.47■■□□□ 1.03
PDCD5-201ENST00000221784 CHIC2Q9UKJ5 165 aa21.47■■□□□ 1.03
PDCD5-201ENST00000221784 PTPN23Q9H3S7 1636 aa21.47■■□□□ 1.03
PDCD5-201ENST00000221784 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.47■■□□□ 1.03
PDCD5-201ENST00000221784 DAPK1P53355 1430 aa21.46■■□□□ 1.03
PDCD5-201ENST00000221784 SHANK2Q9UPX8 1470 aa21.46■■□□□ 1.03
PDCD5-201ENST00000221784 RNF17Q9BXT8 1623 aaKnown RBP21.46■■□□□ 1.03
PDCD5-201ENST00000221784 IQSEC2Q5JU85 1478 aa21.45■■□□□ 1.02
PDCD5-201ENST00000221784 EIF2AK4Q9P2K8 1649 aaKnown RBP21.44■■□□□ 1.02
PDCD5-201ENST00000221784 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.44■■□□□ 1.028e-10■□□□□ 10.9
PDCD5-201ENST00000221784 ERBINQ96RT1 1412 aa21.44■■□□□ 1.02
PDCD5-201ENST00000221784 ANKRD30AQ9BXX3 1397 aa21.43■■□□□ 1.02
PDCD5-201ENST00000221784 UGGT1Q9NYU2 1555 aa21.41■■□□□ 1.02
PDCD5-201ENST00000221784 FAM50AQ14320 339 aaKnown RBP21.41■■□□□ 1.02
PDCD5-201ENST00000221784 MROH1Q8NDA8 1641 aa21.4■■□□□ 1.02
PDCD5-201ENST00000221784 ERVK-7P63135 1459 aa21.4■■□□□ 1.02
PDCD5-201ENST00000221784 SPATA31D1Q6ZQQ2 1576 aa21.39■■□□□ 1.01
PDCD5-201ENST00000221784 KANK1Q14678 1352 aa21.38■■□□□ 1.01
PDCD5-201ENST00000221784 ZC3H13Q5T200 1668 aaKnown RBP21.38■■□□□ 1.01
PDCD5-201ENST00000221784 UBAP1LF5GYI3 381 aa21.38■■□□□ 1.01
PDCD5-201ENST00000221784 ARHGAP31Q2M1Z3 1444 aa21.37■■□□□ 1.01
PDCD5-201ENST00000221784 NPHP4O75161 1426 aaPredicted RBP21.35■■□□□ 1.01
PDCD5-201ENST00000221784 PRDM15P57071 1507 aaPredicted RBP21.34■■□□□ 1.01
PDCD5-201ENST00000221784 CROCC2H7BZ55 1655 aa21.34■■□□□ 1.01
PDCD5-201ENST00000221784 NEURL4Q96JN8 1562 aa21.33■■□□□ 1.01
PDCD5-201ENST00000221784 MED14O60244 1454 aa21.32■■□□□ 1
PDCD5-201ENST00000221784 CEP152O94986 1710 aa21.29■■□□□ 1
PDCD5-201ENST00000221784 ADGRL2O95490 1459 aa21.29■■□□□ 1
PDCD5-201ENST00000221784 TXNDC2Q86VQ3 553 aa21.28■■□□□ 1
PDCD5-201ENST00000221784 STAG3Q9UJ98 1225 aa21.28■■□□□ 1
PDCD5-201ENST00000221784 POLR1AO95602 1720 aaPredicted RBP21.28■■□□□ 1
PDCD5-201ENST00000221784 DEPDC5O75140 1603 aa21.28■■□□□ 1
PDCD5-201ENST00000221784 CPS1P31327 1500 aa21.28■■□□□ 1
PDCD5-201ENST00000221784 LTKP29376 864 aa21.27■■□□□ 1
PDCD5-201ENST00000221784 TOM1O60784 492 aa21.26■□□□□ 0.99
PDCD5-201ENST00000221784 IDI1Q13907 227 aa21.26■□□□□ 0.99
PDCD5-201ENST00000221784 EID1Q9Y6B2 187 aa21.26■□□□□ 0.99
PDCD5-201ENST00000221784 LMTK2Q8IWU2 1503 aa21.25■□□□□ 0.99
PDCD5-201ENST00000221784 ANKRD50Q9ULJ7 1429 aa21.25■□□□□ 0.99
PDCD5-201ENST00000221784 CFAP65Q6ZU64 1925 aaKnown RBP21.23■□□□□ 0.99
PDCD5-201ENST00000221784 DISP3Q9P2K9 1392 aa21.23■□□□□ 0.99
PDCD5-201ENST00000221784 SCAF11Q99590 1463 aaKnown RBP21.23■□□□□ 0.99
PDCD5-201ENST00000221784 VWDEQ8N2E2 1590 aa21.23■□□□□ 0.99
PDCD5-201ENST00000221784 SCAF1Q9H7N4 1312 aaKnown RBP21.22■□□□□ 0.99
PDCD5-201ENST00000221784 PIP4K2BP78356 416 aa21.21■□□□□ 0.99
PDCD5-201ENST00000221784 PPARGC1BQ86YN6 1023 aaKnown RBP21.21■□□□□ 0.99
PDCD5-201ENST00000221784 TMEM2Q9UHN6 1383 aa21.21■□□□□ 0.99
PDCD5-201ENST00000221784 ARHGAP23Q9P227 1491 aa21.2■□□□□ 0.98
PDCD5-201ENST00000221784 SLC52A1Q9NWF4 448 aa21.2■□□□□ 0.98
PDCD5-201ENST00000221784 SLIT1O75093 1534 aa21.19■□□□□ 0.98
PDCD5-201ENST00000221784 UBR1Q8IWV7 1749 aa21.19■□□□□ 0.98
PDCD5-201ENST00000221784 NOS1P29475 1434 aa21.19■□□□□ 0.98
PDCD5-201ENST00000221784 IQGAP1P46940 1657 aa21.18■□□□□ 0.98
PDCD5-201ENST00000221784 ROCK1Q13464 1354 aa21.16■□□□□ 0.98
PDCD5-201ENST00000221784 ITGAEP38570 1179 aa21.16■□□□□ 0.98
PDCD5-201ENST00000221784 EFCAB6Q5THR3 1501 aa21.14■□□□□ 0.98
PDCD5-201ENST00000221784 HSPA1LP34931 641 aa21.14■□□□□ 0.97
PDCD5-201ENST00000221784 PIK3C2BO00750 1634 aa21.13■□□□□ 0.97
PDCD5-201ENST00000221784 LRRC7Q96NW7 1537 aa21.13■□□□□ 0.97
PDCD5-201ENST00000221784 RPRD2Q5VT52 1461 aaKnown RBP21.13■□□□□ 0.97
PDCD5-201ENST00000221784 SYNMO15061 1565 aa21.11■□□□□ 0.97
PDCD5-201ENST00000221784 ILDR2Q71H61 639 aa21.1■□□□□ 0.97
PDCD5-201ENST00000221784 SLC26A8Q96RN1 970 aa21.09■□□□□ 0.97
PDCD5-201ENST00000221784 HDGFP51858 240 aaKnown RBP21.08■□□□□ 0.97
PDCD5-201ENST00000221784 BCANQ96GW7 911 aa21.08■□□□□ 0.97
PDCD5-201ENST00000221784 KCNA6P17658 529 aa21.07■□□□□ 0.96
PDCD5-201ENST00000221784 NUP155O75694 1391 aa21.06■□□□□ 0.96
PDCD5-201ENST00000221784 CHGAP10645 457 aaKnown RBP21.05■□□□□ 0.96
PDCD5-201ENST00000221784 KDM5AP29375 1690 aaKnown RBP21.05■□□□□ 0.96
PDCD5-201ENST00000221784 STRCP1A6NGW2 1772 aa21.05■□□□□ 0.96
PDCD5-201ENST00000221784 ADGRB3O60242 1522 aa21.04■□□□□ 0.96
PDCD5-201ENST00000221784 PPP1R15AO75807 674 aaPredicted RBP21.03■□□□□ 0.96
PDCD5-201ENST00000221784 TET3O43151 1660 aa21.02■□□□□ 0.96
PDCD5-201ENST00000221784 UNC13BO14795 1591 aa21.02■□□□□ 0.95
PDCD5-201ENST00000221784 ALKQ9UM73 1620 aa21.01■□□□□ 0.95
PDCD5-201ENST00000221784 PROSER2Q86WR7 435 aaPredicted RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms