RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 STK31Q9BXU1 1019 aa17.01■□□□□ 0.31
TGFBR3-201ENST00000212355 ST20-MTHFSA0A0A6YYL1 179 aa17.01■□□□□ 0.31
TGFBR3-201ENST00000212355 CALD1Q05682 793 aaKnown RBP17■□□□□ 0.31
TGFBR3-201ENST00000212355 TIMELESSQ9UNS1 1208 aa17■□□□□ 0.31
TGFBR3-201ENST00000212355 COG6Q9Y2V7 657 aa17■□□□□ 0.31
TGFBR3-201ENST00000212355 FBXW7Q969H0 707 aa17■□□□□ 0.31
TGFBR3-201ENST00000212355 FOSBP53539 338 aa16.99■□□□□ 0.31
TGFBR3-201ENST00000212355 RASSF8Q8NHQ8 419 aa16.98■□□□□ 0.31
TGFBR3-201ENST00000212355 PDE4AP27815 886 aa16.97■□□□□ 0.31
TGFBR3-201ENST00000212355 WWC1Q8IX03 1113 aa16.97■□□□□ 0.31
TGFBR3-201ENST00000212355 NGDNQ8NEJ9 315 aaKnown RBP16.97■□□□□ 0.31
TGFBR3-201ENST00000212355 AMPHP49418 695 aa16.97■□□□□ 0.31
TGFBR3-201ENST00000212355 PES1O00541 588 aaKnown RBP16.96■□□□□ 0.31
TGFBR3-201ENST00000212355 MROH2BQ7Z745 1585 aa16.96■□□□□ 0.31
TGFBR3-201ENST00000212355 SPAG9O60271 1321 aaKnown RBP16.96■□□□□ 0.31
TGFBR3-201ENST00000212355 ZNF428Q96B54 188 aa16.96■□□□□ 0.31
TGFBR3-201ENST00000212355 VPS53Q5VIR6 699 aa16.95■□□□□ 0.3
TGFBR3-201ENST00000212355 WIZO95785 1651 aa16.94■□□□□ 0.3
TGFBR3-201ENST00000212355 KDM4AO75164 1064 aa16.93■□□□□ 0.3
TGFBR3-201ENST00000212355 EIF2S2P20042 333 aaKnown RBP16.93■□□□□ 0.3
TGFBR3-201ENST00000212355 PRM3Q9NNZ6 103 aa16.92■□□□□ 0.3
TGFBR3-201ENST00000212355 CCAR2Q8N163 923 aaKnown RBP16.92■□□□□ 0.3
TGFBR3-201ENST00000212355 BAZ1AQ9NRL2 1556 aaPredicted RBP16.92■□□□□ 0.3
TGFBR3-201ENST00000212355 HDGFP51858 240 aaKnown RBP16.92■□□□□ 0.3
TGFBR3-201ENST00000212355 SYAP1Q96A49 352 aaPredicted RBP16.91■□□□□ 0.3
TGFBR3-201ENST00000212355 FBXO3Q9UK99 471 aa16.91■□□□□ 0.3
TGFBR3-201ENST00000212355 FRAT2O75474 233 aaPredicted RBP16.91■□□□□ 0.3
TGFBR3-201ENST00000212355 ZNF592Q92610 1267 aa16.91■□□□□ 0.3
TGFBR3-201ENST00000212355 GPATCH3Q96I76 525 aa16.91■□□□□ 0.3
TGFBR3-201ENST00000212355 A0A0U1RQG5 324 aaPredicted RBP16.9■□□□□ 0.3
TGFBR3-201ENST00000212355 RUSC2Q8N2Y8 1516 aa16.9■□□□□ 0.3
TGFBR3-201ENST00000212355 RRP1P56182 461 aaKnown RBP16.9■□□□□ 0.3
TGFBR3-201ENST00000212355 RAD21O60216 631 aa16.9■□□□□ 0.3
TGFBR3-201ENST00000212355 WASHC2CQ9Y4E1 1318 aa16.89■□□□□ 0.29
TGFBR3-201ENST00000212355 ANKRD30AQ9BXX3 1397 aa16.89■□□□□ 0.29
TGFBR3-201ENST00000212355 NLRP13Q86W25 1043 aa16.89■□□□□ 0.29
TGFBR3-201ENST00000212355 DDX49Q9Y6V7 483 aaKnown RBP16.89■□□□□ 0.29
TGFBR3-201ENST00000212355 APAF1O14727 1248 aa16.89■□□□□ 0.29
TGFBR3-201ENST00000212355 MCTP1Q6DN14 999 aa16.89■□□□□ 0.29
TGFBR3-201ENST00000212355 MINK1Q8N4C8 1332 aaPredicted RBP16.88■□□□□ 0.29
TGFBR3-201ENST00000212355 TNNT3P45378 269 aaPredicted RBP16.88■□□□□ 0.29
TGFBR3-201ENST00000212355 KIF16BQ96L93 1317 aa16.88■□□□□ 0.29
TGFBR3-201ENST00000212355 H3BQV1 296 aa16.87■□□□□ 0.29
TGFBR3-201ENST00000212355 SF3A1Q15459 793 aaKnown RBP16.87■□□□□ 0.29
TGFBR3-201ENST00000212355 IFFO2Q5TF58 517 aa16.87■□□□□ 0.29
TGFBR3-201ENST00000212355 RAPGEF2Q9Y4G8 1499 aa16.87■□□□□ 0.29
TGFBR3-201ENST00000212355 FMN1Q68DA7 1419 aa16.86■□□□□ 0.29
TGFBR3-201ENST00000212355 TPM4P67936 248 aa16.86■□□□□ 0.29
TGFBR3-201ENST00000212355 TERF2IPQ9NYB0 399 aa16.86■□□□□ 0.29
TGFBR3-201ENST00000212355 MYBBP1AQ9BQG0 1328 aaKnown RBP16.86■□□□□ 0.29
TGFBR3-201ENST00000212355 HMMRO75330 724 aa16.86■□□□□ 0.29
TGFBR3-201ENST00000212355 G3V3G9 751 aa16.86■□□□□ 0.29
TGFBR3-201ENST00000212355 DCAF8Q5TAQ9 597 aa16.86■□□□□ 0.29
TGFBR3-201ENST00000212355 ST18O60284 1047 aa16.86■□□□□ 0.29
TGFBR3-201ENST00000212355 FAM161AQ3B820 660 aa16.85■□□□□ 0.29
TGFBR3-201ENST00000212355 PATL2C9JE40 543 aaKnown RBP16.85■□□□□ 0.29
TGFBR3-201ENST00000212355 NACADO15069 1562 aa16.85■□□□□ 0.29
TGFBR3-201ENST00000212355 EIF3AQ14152 1382 aaKnown RBP16.85■□□□□ 0.29
TGFBR3-201ENST00000212355 DHX57Q6P158 1386 aaKnown RBP16.84■□□□□ 0.29
TGFBR3-201ENST00000212355 KIF15Q9NS87 1388 aa16.84■□□□□ 0.29
TGFBR3-201ENST00000212355 GSE1Q14687 1217 aa16.84■□□□□ 0.29
TGFBR3-201ENST00000212355 HSP90AA2PQ14568 343 aaPredicted RBP16.83■□□□□ 0.29
TGFBR3-201ENST00000212355 VSIG10Q8N0Z9 540 aa16.83■□□□□ 0.28
TGFBR3-201ENST00000212355 HTATSF1O43719 755 aaKnown RBP16.82■□□□□ 0.28
TGFBR3-201ENST00000212355 CFAP44Q96MT7 982 aa16.82■□□□□ 0.28
TGFBR3-201ENST00000212355 PTMSP20962 102 aa16.82■□□□□ 0.28
TGFBR3-201ENST00000212355 HMOX1P09601 288 aa16.82■□□□□ 0.28
TGFBR3-201ENST00000212355 PRKRIP1Q9H875 184 aaPredicted RBP16.82■□□□□ 0.28
TGFBR3-201ENST00000212355 GTF2E1P29083 439 aaPredicted RBP16.81■□□□□ 0.28
TGFBR3-201ENST00000212355 NUTM2GQ5VZR2 741 aa16.81■□□□□ 0.28
TGFBR3-201ENST00000212355 MARCH6O60337 910 aa16.81■□□□□ 0.28
TGFBR3-201ENST00000212355 EFCAB2Q5VUJ9 269 aa16.81■□□□□ 0.28
TGFBR3-201ENST00000212355 CENPQQ7L2Z9 268 aaPredicted RBP16.81■□□□□ 0.28
TGFBR3-201ENST00000212355 FAM184AQ8NB25 1140 aa16.81■□□□□ 0.28
TGFBR3-201ENST00000212355 TPD52L1Q16890 204 aaPredicted RBP16.79■□□□□ 0.28
TGFBR3-201ENST00000212355 PANK1Q8TE04 598 aa16.79■□□□□ 0.28
TGFBR3-201ENST00000212355 ANO2Q9NQ90 1003 aa16.79■□□□□ 0.28
TGFBR3-201ENST00000212355 SYTL4Q96C24 671 aaPredicted RBP16.78■□□□□ 0.28
TGFBR3-201ENST00000212355 SAMD1Q6SPF0 538 aaPredicted RBP16.77■□□□□ 0.28
TGFBR3-201ENST00000212355 USP47Q96K76 1375 aa16.77■□□□□ 0.28
TGFBR3-201ENST00000212355 ZKSCAN2Q63HK3 967 aa16.77■□□□□ 0.28
TGFBR3-201ENST00000212355 CARMIL2Q6F5E8 1435 aa16.77■□□□□ 0.28
TGFBR3-201ENST00000212355 LNPKQ9C0E8 428 aa16.77■□□□□ 0.27
TGFBR3-201ENST00000212355 GOLGA6L1Q8N7Z2 621 aa16.77■□□□□ 0.27
TGFBR3-201ENST00000212355 FAM13BQ9NYF5 915 aa16.76■□□□□ 0.27
TGFBR3-201ENST00000212355 DDX11L8A8MPP1 907 aa16.76■□□□□ 0.27
TGFBR3-201ENST00000212355 MSH5O43196 834 aa16.76■□□□□ 0.27
TGFBR3-201ENST00000212355 RIPK4P57078 832 aa16.75■□□□□ 0.27
TGFBR3-201ENST00000212355 APPP05067 770 aa16.75■□□□□ 0.27
TGFBR3-201ENST00000212355 TMX4Q9H1E5 349 aaPredicted RBP16.74■□□□□ 0.27
TGFBR3-201ENST00000212355 CSPP1Q1MSJ5 1256 aa16.74■□□□□ 0.27
TGFBR3-201ENST00000212355 COG3Q96JB2 828 aa16.74■□□□□ 0.27
TGFBR3-201ENST00000212355 MTMR7Q9Y216 660 aa16.74■□□□□ 0.27
TGFBR3-201ENST00000212355 GOLGA6L19H0YKK7 550 aa16.73■□□□□ 0.27
TGFBR3-201ENST00000212355 DIAPH3Q9NSV4 1193 aa16.73■□□□□ 0.27
TGFBR3-201ENST00000212355 EID1Q9Y6B2 187 aa16.73■□□□□ 0.27
TGFBR3-201ENST00000212355 CCDC144AA2RUR9 1427 aa16.73■□□□□ 0.27
TGFBR3-201ENST00000212355 PHF14O94880 888 aa16.72■□□□□ 0.27
TGFBR3-201ENST00000212355 C1orf141Q5JVX7 400 aa16.72■□□□□ 0.27
TGFBR3-201ENST00000212355 AIMP1Q12904 312 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms