RNA–Protein interactions for RNA: ENST00000209875.8

CBX5-201, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 11,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-201ENST00000209875 LRRC9Q6ZRR7 1453 aa7.22□□□□□ -1.25
CBX5-201ENST00000209875 KIAA1211Q6ZU35 1233 aa7.22□□□□□ -1.25
CBX5-201ENST00000209875 CENPQQ7L2Z9 268 aaPredicted RBP7.22□□□□□ -1.25
CBX5-201ENST00000209875 SALL2Q9Y467 1007 aaPredicted RBP7.22□□□□□ -1.25
CBX5-201ENST00000209875 ATP6V1DQ9Y5K8 247 aa7.22□□□□□ -1.25
CBX5-201ENST00000209875 HMGB1P09429 215 aaKnown RBP7.21□□□□□ -1.25
CBX5-201ENST00000209875 SYNJ2O15056 1496 aa7.21□□□□□ -1.26
CBX5-201ENST00000209875 U2SURPO15042 1029 aaKnown RBP7.21□□□□□ -1.26
CBX5-201ENST00000209875 SKOR2Q2VWA4 1001 aaPredicted RBP7.21□□□□□ -1.26
CBX5-201ENST00000209875 CT47B1P0C2W7 299 aaPredicted RBP7.21□□□□□ -1.26
CBX5-201ENST00000209875 OS9Q13438 667 aaPredicted RBP7.21□□□□□ -1.26
CBX5-201ENST00000209875 PHF14O94880 888 aa7.21□□□□□ -1.26
CBX5-201ENST00000209875 DAPK1P53355 1430 aa7.21□□□□□ -1.26
CBX5-201ENST00000209875 CENPJQ9HC77 1338 aaPredicted RBP7.21□□□□□ -1.26
CBX5-201ENST00000209875 RPGRIP1LQ68CZ1 1315 aa7.2□□□□□ -1.26
CBX5-201ENST00000209875 SETQ01105 290 aaPredicted RBP7.2□□□□□ -1.26
CBX5-201ENST00000209875 KIF3BO15066 747 aa7.2□□□□□ -1.26
CBX5-201ENST00000209875 GOLGA6L1Q8N7Z2 621 aa7.2□□□□□ -1.26
CBX5-201ENST00000209875 MTERF4Q7Z6M4 381 aaKnown RBP7.2□□□□□ -1.26
CBX5-201ENST00000209875 LAS1LQ9Y4W2 734 aaKnown RBP7.2□□□□□ -1.26
CBX5-201ENST00000209875 BRD4O60885 1362 aaPredicted RBP7.19□□□□□ -1.26
CBX5-201ENST00000209875 CCDC7Q96M83 1385 aa7.19□□□□□ -1.26
CBX5-201ENST00000209875 TPM4P67936 248 aa7.19□□□□□ -1.26
CBX5-201ENST00000209875 PDIA4P13667 645 aaKnown RBP7.19□□□□□ -1.26
CBX5-201ENST00000209875 ANKRD50Q9ULJ7 1429 aa7.19□□□□□ -1.26
CBX5-201ENST00000209875 MRC2Q9UBG0 1479 aa7.19□□□□□ -1.26
CBX5-201ENST00000209875 FGD1P98174 961 aa7.19□□□□□ -1.26
CBX5-201ENST00000209875 FRAT1Q92837 279 aaPredicted RBP7.19□□□□□ -1.26
CBX5-201ENST00000209875 GOLGA6L3A6NEY3 463 aa7.19□□□□□ -1.26
CBX5-201ENST00000209875 ZNF428Q96B54 188 aa7.19□□□□□ -1.26
CBX5-201ENST00000209875 KCNJ4P48050 445 aa7.19□□□□□ -1.26
CBX5-201ENST00000209875 API5Q9BZZ5 524 aaKnown RBP7.19□□□□□ -1.26
CBX5-201ENST00000209875 PRKRIP1Q9H875 184 aaPredicted RBP7.19□□□□□ -1.26
CBX5-201ENST00000209875 TOP2BQ02880 1626 aa7.19□□□□□ -1.26
CBX5-201ENST00000209875 U2AF1L5P0DN76 240 aaPredicted RBP7.18□□□□□ -1.26
CBX5-201ENST00000209875 U2AF1Q01081 240 aaKnown RBP eCLIP7.18□□□□□ -1.26
CBX5-201ENST00000209875 RBM19Q9Y4C8 960 aaKnown RBP7.18□□□□□ -1.26
CBX5-201ENST00000209875 USP47Q96K76 1375 aa7.18□□□□□ -1.26
CBX5-201ENST00000209875 DDX11L8A8MPP1 907 aa7.18□□□□□ -1.26
CBX5-201ENST00000209875 HSP90AA2PQ14568 343 aaPredicted RBP7.18□□□□□ -1.26
CBX5-201ENST00000209875 HSP90AB4PQ58FF6 505 aa7.18□□□□□ -1.26
CBX5-201ENST00000209875 CC2D1BQ5T0F9 858 aaKnown RBP7.18□□□□□ -1.26
CBX5-201ENST00000209875 CALRP27797 417 aaKnown RBP7.17□□□□□ -1.26
CBX5-201ENST00000209875 GGT6Q6P531 493 aa7.17□□□□□ -1.26
CBX5-201ENST00000209875 KIF16BQ96L93 1317 aa7.17□□□□□ -1.26
CBX5-201ENST00000209875 PEG3Q9GZU2 1588 aa7.17□□□□□ -1.26
CBX5-201ENST00000209875 A0A0U1RQG5 324 aaPredicted RBP7.17□□□□□ -1.26
CBX5-201ENST00000209875 AKNAQ7Z591 1439 aa7.17□□□□□ -1.26
CBX5-201ENST00000209875 OSCARQ8IYS5 282 aa7.17□□□□□ -1.26
CBX5-201ENST00000209875 ST18O60284 1047 aa7.17□□□□□ -1.26
CBX5-201ENST00000209875 DHX8Q14562 1220 aaKnown RBP7.17□□□□□ -1.26
CBX5-201ENST00000209875 IPO9Q96P70 1041 aaKnown RBP7.17□□□□□ -1.26
CBX5-201ENST00000209875 NCOA2Q15596 1464 aa7.17□□□□□ -1.26
CBX5-201ENST00000209875 DDX19BQ9UMR2 479 aa7.16□□□□□ -1.26
CBX5-201ENST00000209875 TROQ12816 1431 aaPredicted RBP7.16□□□□□ -1.26
CBX5-201ENST00000209875 ISY1Q9ULR0 285 aaKnown RBP7.16□□□□□ -1.26
CBX5-201ENST00000209875 KIAA0586Q9BVV6 1533 aa7.16□□□□□ -1.26
CBX5-201ENST00000209875 ZKSCAN2Q63HK3 967 aa7.16□□□□□ -1.26
CBX5-201ENST00000209875 ABCA10Q8WWZ4 1543 aa7.15□□□□□ -1.26
CBX5-201ENST00000209875 HSP90B1P14625 803 aaKnown RBP7.15□□□□□ -1.26
CBX5-201ENST00000209875 PPP6R1Q9UPN7 881 aa7.15□□□□□ -1.26
CBX5-201ENST00000209875 ANKRD30BQ9BXX2 1392 aa7.15□□□□□ -1.26
CBX5-201ENST00000209875 FANCIQ9NVI1 1328 aa7.15□□□□□ -1.26
CBX5-201ENST00000209875 DNMBPQ6XZF7 1577 aa7.15□□□□□ -1.26
CBX5-201ENST00000209875 HECW1Q76N89 1606 aa7.15□□□□□ -1.27
CBX5-201ENST00000209875 GPS2Q13227 327 aa7.15□□□□□ -1.27
CBX5-201ENST00000209875 RGS3P49796 1198 aa7.14□□□□□ -1.27
CBX5-201ENST00000209875 REC8O95072 547 aa7.14□□□□□ -1.27
CBX5-201ENST00000209875 SLC52A1Q9NWF4 448 aa7.14□□□□□ -1.27
CBX5-201ENST00000209875 TMX4Q9H1E5 349 aaPredicted RBP7.14□□□□□ -1.27
CBX5-201ENST00000209875 RUFY2Q8WXA3 655 aa7.14□□□□□ -1.27
CBX5-201ENST00000209875 DRC7Q8IY82 874 aa7.14□□□□□ -1.27
CBX5-201ENST00000209875 MAP7D2Q96T17 732 aa7.13□□□□□ -1.27
CBX5-201ENST00000209875 FAM161AQ3B820 660 aa7.13□□□□□ -1.27
CBX5-201ENST00000209875 SMC4Q9NTJ3 1288 aa7.13□□□□□ -1.27
CBX5-201ENST00000209875 GNAI1P63096 354 aa7.13□□□□□ -1.27
CBX5-201ENST00000209875 NEUROD2Q15784 382 aa7.13□□□□□ -1.27
CBX5-201ENST00000209875 COG3Q96JB2 828 aa7.13□□□□□ -1.27
CBX5-201ENST00000209875 CCDC141Q6ZP82 1450 aa7.13□□□□□ -1.27
CBX5-201ENST00000209875 HIRIP3Q9BW71 556 aaPredicted RBP7.13□□□□□ -1.27
CBX5-201ENST00000209875 LAMC3Q9Y6N6 1575 aa7.13□□□□□ -1.27
CBX5-201ENST00000209875 KIAA1107Q9UPP5 1409 aa7.12□□□□□ -1.27
CBX5-201ENST00000209875 ITPRIPQ8IWB1 547 aa7.12□□□□□ -1.27
CBX5-201ENST00000209875 PLCB2Q00722 1185 aa7.11□□□□□ -1.27
CBX5-201ENST00000209875 HNRNPMP52272 730 aaKnown RBP eCLIP7.11□□□□□ -1.27
CBX5-201ENST00000209875 CPLX2Q6PUV4 134 aaKnown RBP7.11□□□□□ -1.27
CBX5-201ENST00000209875 THOC2Q8NI27 1593 aaKnown RBP7.11□□□□□ -1.27
CBX5-201ENST00000209875 RTN4Q9NQC3 1192 aaKnown RBP7.11□□□□□ -1.27
CBX5-201ENST00000209875 ST20-MTHFSA0A0A6YYL1 179 aa7.11□□□□□ -1.27
CBX5-201ENST00000209875 NOM1Q5C9Z4 860 aaKnown RBP7.11□□□□□ -1.27
CBX5-201ENST00000209875 RUNDC1Q96C34 613 aa7.11□□□□□ -1.27
CBX5-201ENST00000209875 IRX6P78412 446 aaPredicted RBP7.11□□□□□ -1.27
CBX5-201ENST00000209875 CUL7Q14999 1698 aa7.11□□□□□ -1.27
CBX5-201ENST00000209875 DDX58O95786 925 aaKnown RBP7.1□□□□□ -1.27
CBX5-201ENST00000209875 MCM2P49736 904 aa7.1□□□□□ -1.27
CBX5-201ENST00000209875 TOPBP1Q92547 1522 aa7.1□□□□□ -1.27
CBX5-201ENST00000209875 RRP1P56182 461 aaKnown RBP7.1□□□□□ -1.27
CBX5-201ENST00000209875 MAGI1Q96QZ7 1491 aaPredicted RBP7.1□□□□□ -1.27
CBX5-201ENST00000209875 NEXNQ0ZGT2 675 aa7.1□□□□□ -1.27
CBX5-201ENST00000209875 GSE1Q14687 1217 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms