RNA–Protein interactions for RNA: ENST00000080059.11

HDAC7-201, Transcript of histone deacetylase 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HDAC7, Length 4,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-201ENST00000080059 HDGFP51858 240 aaKnown RBP17.01■□□□□ 0.31
HDAC7-201ENST00000080059 MYH16Q9H6N6 1097 aa17.01■□□□□ 0.31
HDAC7-201ENST00000080059 LMOD2Q6P5Q4 547 aa17■□□□□ 0.31
HDAC7-201ENST00000080059 ZBED9Q6R2W3 1325 aa16.99■□□□□ 0.31
HDAC7-201ENST00000080059 GRIN2AQ12879 1464 aa16.99■□□□□ 0.31
HDAC7-201ENST00000080059 HDGFL2Q7Z4V5 671 aaPredicted RBP16.99■□□□□ 0.31
HDAC7-201ENST00000080059 ANP32EQ9BTT0 268 aa16.98■□□□□ 0.31
HDAC7-201ENST00000080059 CNTLNQ9NXG0 1405 aa16.98■□□□□ 0.31
HDAC7-201ENST00000080059 KIAA1107Q9UPP5 1409 aa16.97■□□□□ 0.31
HDAC7-201ENST00000080059 GOLGA2Q08379 1002 aa16.97■□□□□ 0.31
HDAC7-201ENST00000080059 VGFO15240 615 aaPredicted RBP16.95■□□□□ 0.3
HDAC7-201ENST00000080059 ARHGEF11O15085 1522 aa16.94■□□□□ 0.3
HDAC7-201ENST00000080059 CCDC184Q52MB2 194 aa16.94■□□□□ 0.3
HDAC7-201ENST00000080059 PDE3BQ13370 1112 aa16.94■□□□□ 0.3
HDAC7-201ENST00000080059 ABCC5O15440 1437 aa16.93■□□□□ 0.3
HDAC7-201ENST00000080059 NUTM2FA1L443 756 aa16.93■□□□□ 0.3
HDAC7-201ENST00000080059 CFAP70Q5T0N1 1121 aa16.92■□□□□ 0.3
HDAC7-201ENST00000080059 RRP7AQ9Y3A4 280 aaKnown RBP16.92■□□□□ 0.3
HDAC7-201ENST00000080059 PTPN23Q9H3S7 1636 aa16.92■□□□□ 0.3
HDAC7-201ENST00000080059 PNNQ9H307 717 aaKnown RBP16.92■□□□□ 0.3
HDAC7-201ENST00000080059 TERF2IPQ9NYB0 399 aa16.92■□□□□ 0.3
HDAC7-201ENST00000080059 PLIN1O60240 522 aa16.91■□□□□ 0.3
HDAC7-201ENST00000080059 PTPRKQ15262 1439 aa16.91■□□□□ 0.3
HDAC7-201ENST00000080059 ROCK1Q13464 1354 aa16.91■□□□□ 0.3
HDAC7-201ENST00000080059 C11orf95C9JLR9 678 aaPredicted RBP16.91■□□□□ 0.3
HDAC7-201ENST00000080059 FAM69CQ0P6D2 419 aa16.91■□□□□ 0.3
HDAC7-201ENST00000080059 TMEM132EQ6IEE7 984 aa16.91■□□□□ 0.3
HDAC7-201ENST00000080059 DDRGK1Q96HY6 314 aa16.91■□□□□ 0.3
HDAC7-201ENST00000080059 ARXQ96QS3 562 aa16.9■□□□□ 0.3
HDAC7-201ENST00000080059 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.9■□□□□ 0.3
HDAC7-201ENST00000080059 SCAPERQ9BY12 1400 aa16.89■□□□□ 0.29
HDAC7-201ENST00000080059 MAGI1Q96QZ7 1491 aaPredicted RBP16.89■□□□□ 0.29
HDAC7-201ENST00000080059 ANKRD30BQ9BXX2 1392 aa16.89■□□□□ 0.29
HDAC7-201ENST00000080059 MINK1Q8N4C8 1332 aaPredicted RBP16.88■□□□□ 0.29
HDAC7-201ENST00000080059 APAF1O14727 1248 aa16.88■□□□□ 0.29
HDAC7-201ENST00000080059 CLUAP1Q96AJ1 413 aa16.88■□□□□ 0.29
HDAC7-201ENST00000080059 NOP58Q9Y2X3 529 aaKnown RBP16.88■□□□□ 0.29
HDAC7-201ENST00000080059 NCOA1Q15788 1441 aa16.86■□□□□ 0.29
HDAC7-201ENST00000080059 MS4A1P11836 297 aa16.86■□□□□ 0.29
HDAC7-201ENST00000080059 CAMSAP2Q08AD1 1489 aa16.85■□□□□ 0.29
HDAC7-201ENST00000080059 BECN1Q14457 450 aa16.85■□□□□ 0.29
HDAC7-201ENST00000080059 THOC2Q8NI27 1593 aaKnown RBP16.85■□□□□ 0.29
HDAC7-201ENST00000080059 CENPJQ9HC77 1338 aaPredicted RBP16.85■□□□□ 0.29
HDAC7-201ENST00000080059 EXOC6Q8TAG9 804 aa16.85■□□□□ 0.29
HDAC7-201ENST00000080059 STAC3Q96MF2 364 aa16.84■□□□□ 0.29
HDAC7-201ENST00000080059 EVC2Q86UK5 1308 aa16.84■□□□□ 0.29
HDAC7-201ENST00000080059 A0A0G2JS52 829 aa16.83■□□□□ 0.28
HDAC7-201ENST00000080059 RAPGEF3O95398 923 aa16.83■□□□□ 0.28
HDAC7-201ENST00000080059 PAK3O75914 559 aaPredicted RBP16.82■□□□□ 0.28
HDAC7-201ENST00000080059 BCL2L13Q9BXK5 485 aa16.82■□□□□ 0.28
HDAC7-201ENST00000080059 CGNL1Q0VF96 1302 aa16.82■□□□□ 0.28
HDAC7-201ENST00000080059 RRP1P56182 461 aaKnown RBP16.81■□□□□ 0.28
HDAC7-201ENST00000080059 AKNAQ7Z591 1439 aa16.81■□□□□ 0.28
HDAC7-201ENST00000080059 HAP1P54257 671 aaPredicted RBP16.8■□□□□ 0.28
HDAC7-201ENST00000080059 ADAMTS8Q9UP79 889 aa16.8■□□□□ 0.28
HDAC7-201ENST00000080059 MAPKBP1O60336 1514 aa16.79■□□□□ 0.28
HDAC7-201ENST00000080059 TCERG1O14776 1098 aaKnown RBP16.79■□□□□ 0.28
HDAC7-201ENST00000080059 PLEKHH2Q8IVE3 1493 aa16.78■□□□□ 0.28
HDAC7-201ENST00000080059 SMC4Q9NTJ3 1288 aa16.78■□□□□ 0.28
HDAC7-201ENST00000080059 CDCA7LQ96GN5 454 aa16.78■□□□□ 0.28
HDAC7-201ENST00000080059 EID1Q9Y6B2 187 aa16.77■□□□□ 0.28
HDAC7-201ENST00000080059 CCDC141Q6ZP82 1450 aa16.77■□□□□ 0.28
HDAC7-201ENST00000080059 ITPRIPQ8IWB1 547 aa16.77■□□□□ 0.28
HDAC7-201ENST00000080059 PNISRQ8TF01 805 aaKnown RBP16.77■□□□□ 0.27
HDAC7-201ENST00000080059 GPATCH8Q9UKJ3 1502 aaKnown RBP16.76■□□□□ 0.27
HDAC7-201ENST00000080059 IPO8O15397 1037 aaKnown RBP16.75■□□□□ 0.27
HDAC7-201ENST00000080059 BRD4O60885 1362 aaPredicted RBP16.75■□□□□ 0.27
HDAC7-201ENST00000080059 NGDNQ8NEJ9 315 aaKnown RBP16.75■□□□□ 0.27
HDAC7-201ENST00000080059 RTF1Q92541 710 aaKnown RBP16.75■□□□□ 0.27
HDAC7-201ENST00000080059 CRBNQ96SW2 442 aa16.75■□□□□ 0.27
HDAC7-201ENST00000080059 CABP2Q9NPB3 220 aa16.75■□□□□ 0.27
HDAC7-201ENST00000080059 NUP153P49790 1475 aaKnown RBP16.75■□□□□ 0.27
HDAC7-201ENST00000080059 CHMP4BQ9H444 224 aaKnown RBP16.75■□□□□ 0.27
HDAC7-201ENST00000080059 ELL2O00472 640 aaPredicted RBP16.74■□□□□ 0.27
HDAC7-201ENST00000080059 SLC12A5Q9H2X9 1139 aa16.74■□□□□ 0.27
HDAC7-201ENST00000080059 GGNBP2Q9H3C7 697 aa16.74■□□□□ 0.27
HDAC7-201ENST00000080059 UGGT2Q9NYU1 1516 aa16.73■□□□□ 0.27
HDAC7-201ENST00000080059 E9PSI1 815 aa16.73■□□□□ 0.27
HDAC7-201ENST00000080059 RPRD2Q5VT52 1461 aaKnown RBP16.72■□□□□ 0.27
HDAC7-201ENST00000080059 APBB1O00213 710 aa16.72■□□□□ 0.27
HDAC7-201ENST00000080059 PPP2R1AP30153 589 aa16.71■□□□□ 0.27
HDAC7-201ENST00000080059 ATP10BO94823 1461 aa16.71■□□□□ 0.27
HDAC7-201ENST00000080059 CTTNBP2Q8WZ74 1663 aa16.7■□□□□ 0.26
HDAC7-201ENST00000080059 RWDD1Q9H446 243 aaPredicted RBP16.7■□□□□ 0.26
HDAC7-201ENST00000080059 COG6Q9Y2V7 657 aa16.7■□□□□ 0.26
HDAC7-201ENST00000080059 MTHFSP49914 203 aa16.7■□□□□ 0.26
HDAC7-201ENST00000080059 CALD1Q05682 793 aaKnown RBP16.7■□□□□ 0.26
HDAC7-201ENST00000080059 KIF14Q15058 1648 aa16.69■□□□□ 0.26
HDAC7-201ENST00000080059 ANP32BQ92688 251 aaKnown RBP16.69■□□□□ 0.26
HDAC7-201ENST00000080059 KIF21AQ7Z4S6 1674 aa16.68■□□□□ 0.26
HDAC7-201ENST00000080059 LTV1Q96GA3 475 aaPredicted RBP16.68■□□□□ 0.26
HDAC7-201ENST00000080059 COG3Q96JB2 828 aa16.67■□□□□ 0.26
HDAC7-201ENST00000080059 AMPHP49418 695 aa16.66■□□□□ 0.26
HDAC7-201ENST00000080059 SPRYD3Q8NCJ5 442 aa16.66■□□□□ 0.26
HDAC7-201ENST00000080059 RAPGEF6Q8TEU7 1601 aa16.66■□□□□ 0.26
HDAC7-201ENST00000080059 PMFBP1Q8TBY8 1022 aa16.65■□□□□ 0.26
HDAC7-201ENST00000080059 DIAPH1O60610 1272 aaKnown RBP16.65■□□□□ 0.26
HDAC7-201ENST00000080059 ERBINQ96RT1 1412 aa16.64■□□□□ 0.25
HDAC7-201ENST00000080059 PDE4AP27815 886 aa16.64■□□□□ 0.25
HDAC7-201ENST00000080059 CASC1Q6TDU7 716 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms