RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 DHX29Q7Z478 1369 aaKnown RBP30.16■■■□□ 2.42
TRAPPC6A-201ENST00000006275 RTEL1-TNFRSF6BF6WH68 1400 aa30.16■■■□□ 2.42
TRAPPC6A-201ENST00000006275 TOM1O60784 492 aa30.16■■■□□ 2.42
TRAPPC6A-201ENST00000006275 TIAM1Q13009 1591 aa30.15■■■□□ 2.42
TRAPPC6A-201ENST00000006275 FBXO31Q5XUX0 539 aaPredicted RBP30.15■■■□□ 2.42
TRAPPC6A-201ENST00000006275 CPS1P31327 1500 aa30.14■■■□□ 2.42
TRAPPC6A-201ENST00000006275 KIF3BO15066 747 aa30.13■■■□□ 2.41
TRAPPC6A-201ENST00000006275 SHANK2Q9UPX8 1470 aa30.12■■■□□ 2.41
TRAPPC6A-201ENST00000006275 NEURL4Q96JN8 1562 aa30.11■■■□□ 2.41
TRAPPC6A-201ENST00000006275 MED1Q15648 1581 aaPredicted RBP30.1■■■□□ 2.41
TRAPPC6A-201ENST00000006275 POLR1AO95602 1720 aaPredicted RBP30.1■■■□□ 2.41
TRAPPC6A-201ENST00000006275 PZPP20742 1482 aa30.09■■■□□ 2.41
TRAPPC6A-201ENST00000006275 EHBP1L1Q8N3D4 1523 aa30.09■■■□□ 2.41
TRAPPC6A-201ENST00000006275 ANKLE2Q86XL3 938 aa30.08■■■□□ 2.41
TRAPPC6A-201ENST00000006275 KDM5DQ9BY66 1539 aa30.07■■■□□ 2.4
TRAPPC6A-201ENST00000006275 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.06■■■□□ 2.4
TRAPPC6A-201ENST00000006275 WASHC2CQ9Y4E1 1318 aa30.06■■■□□ 2.4
TRAPPC6A-201ENST00000006275 THEMISQ8N1K5 641 aaPredicted RBP30.04■■■□□ 2.4
TRAPPC6A-201ENST00000006275 FAM135AQ9P2D6 1515 aa30.04■■■□□ 2.4
TRAPPC6A-201ENST00000006275 CCDC141Q6ZP82 1450 aa30.04■■■□□ 2.4
TRAPPC6A-201ENST00000006275 MIA2Q96PC5 1412 aa30.01■■■□□ 2.39
TRAPPC6A-201ENST00000006275 NLRP1Q9C000 1473 aa29.99■■■□□ 2.39
TRAPPC6A-201ENST00000006275 NPHP4O75161 1426 aaPredicted RBP29.99■■■□□ 2.39
TRAPPC6A-201ENST00000006275 VWDEQ8N2E2 1590 aa29.98■■■□□ 2.39
TRAPPC6A-201ENST00000006275 UGGT1Q9NYU2 1555 aa29.98■■■□□ 2.39
TRAPPC6A-201ENST00000006275 RSPH4AQ5TD94 716 aa29.97■■■□□ 2.39
TRAPPC6A-201ENST00000006275 PHF23Q9BUL5 403 aaPredicted RBP29.97■■■□□ 2.39
TRAPPC6A-201ENST00000006275 CAMSAP2Q08AD1 1489 aa29.97■■■□□ 2.39
TRAPPC6A-201ENST00000006275 MED14O60244 1454 aa29.94■■■□□ 2.38
TRAPPC6A-201ENST00000006275 DEPDC5O75140 1603 aa29.92■■■□□ 2.38
TRAPPC6A-201ENST00000006275 NCOA2Q15596 1464 aa29.92■■■□□ 2.38
TRAPPC6A-201ENST00000006275 TSPY4P0CV99 314 aa29.89■■■□□ 2.38
TRAPPC6A-201ENST00000006275 TSPY10P0CW01 314 aa29.89■■■□□ 2.38
TRAPPC6A-201ENST00000006275 ALKQ9UM73 1620 aa29.89■■■□□ 2.37
TRAPPC6A-201ENST00000006275 SENP3Q9H4L4 574 aaPredicted RBP29.88■■■□□ 2.37
TRAPPC6A-201ENST00000006275 VPS8Q8N3P4 1428 aa29.88■■■□□ 2.37
TRAPPC6A-201ENST00000006275 IQGAP1P46940 1657 aa29.86■■■□□ 2.37
TRAPPC6A-201ENST00000006275 ARHGEF5Q12774 1597 aa29.83■■■□□ 2.37
TRAPPC6A-201ENST00000006275 LRRC7Q96NW7 1537 aa29.81■■■□□ 2.36
TRAPPC6A-201ENST00000006275 ABCC3O15438 1527 aa29.81■■■□□ 2.36
TRAPPC6A-201ENST00000006275 RNF17Q9BXT8 1623 aaKnown RBP29.78■■■□□ 2.36
TRAPPC6A-201ENST00000006275 ERVK-7P63135 1459 aa29.77■■■□□ 2.36
TRAPPC6A-201ENST00000006275 SYNMO15061 1565 aa29.77■■■□□ 2.36
TRAPPC6A-201ENST00000006275 STRCP1A6NGW2 1772 aa29.76■■■□□ 2.35
TRAPPC6A-201ENST00000006275 ZC3H13Q5T200 1668 aaKnown RBP29.75■■■□□ 2.35
TRAPPC6A-201ENST00000006275 SCAF11Q99590 1463 aaKnown RBP29.7■■■□□ 2.35
TRAPPC6A-201ENST00000006275 MAST1Q9Y2H9 1570 aa29.69■■■□□ 2.34
TRAPPC6A-201ENST00000006275 EIF2AK4Q9P2K8 1649 aaKnown RBP29.67■■■□□ 2.34
TRAPPC6A-201ENST00000006275 MROH1Q8NDA8 1641 aa29.65■■■□□ 2.34
TRAPPC6A-201ENST00000006275 TXNDC2Q86VQ3 553 aa29.65■■■□□ 2.34
TRAPPC6A-201ENST00000006275 UBR1Q8IWV7 1749 aa29.65■■■□□ 2.34
TRAPPC6A-201ENST00000006275 LTKP29376 864 aa29.64■■■□□ 2.34
TRAPPC6A-201ENST00000006275 LRRC9Q6ZRR7 1453 aa29.62■■■□□ 2.33
TRAPPC6A-201ENST00000006275 CEP152O94986 1710 aa29.62■■■□□ 2.33
TRAPPC6A-201ENST00000006275 CFAP65Q6ZU64 1925 aaKnown RBP29.61■■■□□ 2.33
TRAPPC6A-201ENST00000006275 ARHGAP23Q9P227 1491 aa29.61■■■□□ 2.33
TRAPPC6A-201ENST00000006275 MAP3K1Q13233 1512 aa29.61■■■□□ 2.33
TRAPPC6A-201ENST00000006275 EID1Q9Y6B2 187 aa29.6■■■□□ 2.33
TRAPPC6A-201ENST00000006275 RGS17Q9UGC6 210 aaPredicted RBP29.59■■■□□ 2.33
TRAPPC6A-201ENST00000006275 SLIT1O75093 1534 aa29.59■■■□□ 2.33
TRAPPC6A-201ENST00000006275 APLP2Q06481 763 aa29.58■■■□□ 2.33
TRAPPC6A-201ENST00000006275 DUOX2Q9NRD8 1548 aa29.57■■■□□ 2.32
TRAPPC6A-201ENST00000006275 ARHGAP31Q2M1Z3 1444 aa29.54■■■□□ 2.32
TRAPPC6A-201ENST00000006275 MYOM3Q5VTT5 1437 aa29.54■■■□□ 2.32
TRAPPC6A-201ENST00000006275 KANK4Q5T7N3 995 aaPredicted RBP29.53■■■□□ 2.32
TRAPPC6A-201ENST00000006275 STAG3Q9UJ98 1225 aa29.52■■■□□ 2.32
TRAPPC6A-201ENST00000006275 KIF15Q9NS87 1388 aa29.52■■■□□ 2.32
TRAPPC6A-201ENST00000006275 FAM135BQ49AJ0 1406 aa29.51■■■□□ 2.31
TRAPPC6A-201ENST00000006275 PRDM15P57071 1507 aaPredicted RBP29.5■■■□□ 2.31
TRAPPC6A-201ENST00000006275 TMEM2Q9UHN6 1383 aa29.5■■■□□ 2.31
TRAPPC6A-201ENST00000006275 XIRP1Q702N8 1843 aaKnown RBP29.5■■■□□ 2.31
TRAPPC6A-201ENST00000006275 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.49■■■□□ 2.31
TRAPPC6A-201ENST00000006275 TMEM94Q12767 1356 aa29.47■■■□□ 2.31
TRAPPC6A-201ENST00000006275 ERBINQ96RT1 1412 aa29.46■■■□□ 2.31
TRAPPC6A-201ENST00000006275 RRP7BPQ9NSQ0 103 aa29.46■■■□□ 2.31
TRAPPC6A-201ENST00000006275 PIK3C2BO00750 1634 aa29.45■■■□□ 2.31
TRAPPC6A-201ENST00000006275 KANK1Q14678 1352 aa29.43■■■□□ 2.3
TRAPPC6A-201ENST00000006275 KCNA6P17658 529 aa29.42■■■□□ 2.3
TRAPPC6A-201ENST00000006275 POTEAQ6S8J7 498 aa29.42■■■□□ 2.3
TRAPPC6A-201ENST00000006275 EFCAB6Q5THR3 1501 aa29.4■■■□□ 2.3
TRAPPC6A-201ENST00000006275 PROSER2Q86WR7 435 aaPredicted RBP29.4■■■□□ 2.3
TRAPPC6A-201ENST00000006275 ABCC5O15440 1437 aa29.39■■■□□ 2.3
TRAPPC6A-201ENST00000006275 SLC26A8Q96RN1 970 aa29.39■■■□□ 2.3
TRAPPC6A-201ENST00000006275 IDI1Q13907 227 aa29.38■■■□□ 2.29
TRAPPC6A-201ENST00000006275 RBM33Q96EV2 1170 aaKnown RBP29.38■■■□□ 2.29
TRAPPC6A-201ENST00000006275 ROBO1Q9Y6N7 1651 aa29.36■■■□□ 2.29
TRAPPC6A-201ENST00000006275 CROCC2H7BZ55 1655 aa29.34■■■□□ 2.29
TRAPPC6A-201ENST00000006275 KDM5AP29375 1690 aaKnown RBP29.32■■■□□ 2.28
TRAPPC6A-201ENST00000006275 DAPK1P53355 1430 aa29.31■■■□□ 2.28
TRAPPC6A-201ENST00000006275 BCANQ96GW7 911 aa29.31■■■□□ 2.28
TRAPPC6A-201ENST00000006275 TET3O43151 1660 aa29.31■■■□□ 2.28
TRAPPC6A-201ENST00000006275 NKTRP30414 1462 aaKnown RBP29.3■■■□□ 2.28
TRAPPC6A-201ENST00000006275 LMTK2Q8IWU2 1503 aa29.3■■■□□ 2.28
TRAPPC6A-201ENST00000006275 MSH6P52701 1360 aa29.29■■■□□ 2.28
TRAPPC6A-201ENST00000006275 PTPN23Q9H3S7 1636 aa29.29■■■□□ 2.28
TRAPPC6A-201ENST00000006275 ANKRD30AQ9BXX3 1397 aa29.26■■■□□ 2.28
TRAPPC6A-201ENST00000006275 CHIC2Q9UKJ5 165 aa29.26■■■□□ 2.27
TRAPPC6A-201ENST00000006275 ADGRB3O60242 1522 aa29.25■■■□□ 2.27
TRAPPC6A-201ENST00000006275 NOS1P29475 1434 aa29.25■■■□□ 2.27
TRAPPC6A-201ENST00000006275 NWD1Q149M9 1564 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms