RNA–Protein interactions for RNA: ENSMUST00000223690.1

Vti1a-202, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

BASIC

Gene Vti1a, Length 4,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1a-202ENSMUST00000223690 Rtl5Q5DTT4 599 aa12.65□□□□□ -0.38
Vti1a-202ENSMUST00000223690 Safb2Q80YR5 991 aaKnown RBP12.65□□□□□ -0.38
Vti1a-202ENSMUST00000223690 Map3k4O08648 1597 aa12.64□□□□□ -0.39
Vti1a-202ENSMUST00000223690 Gm156Q58A37 223 aa12.63□□□□□ -0.39
Vti1a-202ENSMUST00000223690 Setd1bQ8CFT2 1985 aa12.63□□□□□ -0.39
Vti1a-202ENSMUST00000223690 Cd109Q8R422 1442 aa12.63□□□□□ -0.39
Vti1a-202ENSMUST00000223690 Gapvd1Q6PAR5 1458 aa12.61□□□□□ -0.39
Vti1a-202ENSMUST00000223690 Dapk1Q80YE7 1442 aa12.61□□□□□ -0.39
Vti1a-202ENSMUST00000223690 Mapkbp1Q6NS57 1503 aa12.61□□□□□ -0.39
Vti1a-202ENSMUST00000223690 Rtn4Q99P72 1162 aaKnown RBP12.6□□□□□ -0.39
Vti1a-202ENSMUST00000223690 Gcc2Q8CHG3 1679 aa12.6□□□□□ -0.39
Vti1a-202ENSMUST00000223690 Anp32aO35381 247 aa12.59□□□□□ -0.39
Vti1a-202ENSMUST00000223690 Dnmt1P13864 1620 aaKnown RBP12.59□□□□□ -0.39
Vti1a-202ENSMUST00000223690 Nlrp6Q91WS2 869 aa12.59□□□□□ -0.39
Vti1a-202ENSMUST00000223690 Naip5Q9R016 1403 aa12.58□□□□□ -0.4
Vti1a-202ENSMUST00000223690 Kdm6bQ5NCY0 1641 aa12.58□□□□□ -0.4
Vti1a-202ENSMUST00000223690 Kiaa1551Q5DTW7 1521 aa12.57□□□□□ -0.4
Vti1a-202ENSMUST00000223690 Kdm3bQ6ZPY7 1562 aa12.57□□□□□ -0.4
Vti1a-202ENSMUST00000223690 Fan1Q69ZT1 1020 aa12.56□□□□□ -0.4
Vti1a-202ENSMUST00000223690 Mroh2aD3Z750 1679 aa12.56□□□□□ -0.4
Vti1a-202ENSMUST00000223690 Exoc6Q8R313 802 aa12.55□□□□□ -0.4
Vti1a-202ENSMUST00000223690 Rrbp1Q99PL5 1605 aaKnown RBP12.55□□□□□ -0.4
Vti1a-202ENSMUST00000223690 Cnga1P29974 684 aa12.55□□□□□ -0.4
Vti1a-202ENSMUST00000223690 Nsd2Q8BVE8 1365 aa12.55□□□□□ -0.4
Vti1a-202ENSMUST00000223690 Wdr7Q920I9 1489 aa12.54□□□□□ -0.4
Vti1a-202ENSMUST00000223690 Skap1Q3UUV5 355 aa12.54□□□□□ -0.4
Vti1a-202ENSMUST00000223690 Srcin1Q9QWI6 1250 aa12.54□□□□□ -0.4
Vti1a-202ENSMUST00000223690 Znf608Q56A10 1511 aa12.54□□□□□ -0.4
Vti1a-202ENSMUST00000223690 Stag3O70576 1240 aa12.54□□□□□ -0.4
Vti1a-202ENSMUST00000223690 Rprd2Q6NXI6 1469 aaKnown RBP12.54□□□□□ -0.4
Vti1a-202ENSMUST00000223690 Ssh2Q5SW75 1423 aa12.53□□□□□ -0.4
Vti1a-202ENSMUST00000223690 Stk26Q99JT2 416 aa12.53□□□□□ -0.4
Vti1a-202ENSMUST00000223690 Rock2P70336 1388 aa12.53□□□□□ -0.4
Vti1a-202ENSMUST00000223690 IqubQ8CDK3 788 aa12.53□□□□□ -0.4
Vti1a-202ENSMUST00000223690 Rad21Q61550 635 aaKnown RBP12.52□□□□□ -0.4
Vti1a-202ENSMUST00000223690 Gtf2e1Q9D0D5 440 aa12.52□□□□□ -0.41
Vti1a-202ENSMUST00000223690 Sall3Q62255 1320 aa12.51□□□□□ -0.41
Vti1a-202ENSMUST00000223690 Myom3A2ABU4 1439 aa12.51□□□□□ -0.41
Vti1a-202ENSMUST00000223690 Calr4Q3TQS0 420 aa12.51□□□□□ -0.41
Vti1a-202ENSMUST00000223690 Prm3Q62100 101 aa12.5□□□□□ -0.41
Vti1a-202ENSMUST00000223690 ErbinQ80TH2 1402 aa12.5□□□□□ -0.41
Vti1a-202ENSMUST00000223690 AI481877A2ALV5 1481 aa12.5□□□□□ -0.41
Vti1a-202ENSMUST00000223690 Washc2Q6PGL7 1334 aa12.5□□□□□ -0.41
Vti1a-202ENSMUST00000223690 Dennd4bQ3U1Y4 1499 aa12.49□□□□□ -0.41
Vti1a-202ENSMUST00000223690 Smg6P61406 1418 aaKnown RBP12.49□□□□□ -0.41
Vti1a-202ENSMUST00000223690 Cdc42bpaQ3UU96 1719 aa12.49□□□□□ -0.41
Vti1a-202ENSMUST00000223690 Pik3c2gO70167 1506 aa12.49□□□□□ -0.41
Vti1a-202ENSMUST00000223690 PtprtQ99M80 1454 aa12.48□□□□□ -0.41
Vti1a-202ENSMUST00000223690 MyclP10166 368 aa12.48□□□□□ -0.41
Vti1a-202ENSMUST00000223690 AlkP97793 1621 aa12.47□□□□□ -0.41
Vti1a-202ENSMUST00000223690 SphkapQ6NSW3 1687 aa12.47□□□□□ -0.41
Vti1a-202ENSMUST00000223690 Exosc9Q9JHI7 438 aaKnown RBP12.46□□□□□ -0.41
Vti1a-202ENSMUST00000223690 Usp40Q8BWR4 1235 aa12.46□□□□□ -0.42
Vti1a-202ENSMUST00000223690 OvosQ3UU35 1456 aa12.45□□□□□ -0.42
Vti1a-202ENSMUST00000223690 Atp7aQ64430 1491 aa12.45□□□□□ -0.42
Vti1a-202ENSMUST00000223690 Ttc21bQ0HA38 1315 aa12.45□□□□□ -0.42
Vti1a-202ENSMUST00000223690 Afap1Q80YS6 731 aa12.45□□□□□ -0.42
Vti1a-202ENSMUST00000223690 Pank3Q8R2W9 370 aa12.45□□□□□ -0.42
Vti1a-202ENSMUST00000223690 Ncbp3Q8BZR9 615 aaKnown RBP12.44□□□□□ -0.42
Vti1a-202ENSMUST00000223690 Ofd1Q80Z25 1017 aa12.44□□□□□ -0.42
Vti1a-202ENSMUST00000223690 Inpp5dQ9ES52 1191 aa12.44□□□□□ -0.42
Vti1a-202ENSMUST00000223690 Tmf1B9EKI3 1091 aa12.43□□□□□ -0.42
Vti1a-202ENSMUST00000223690 Adgrl2Q8JZZ7 1487 aa12.43□□□□□ -0.42
Vti1a-202ENSMUST00000223690 Cfap74Q3UY96 1578 aa12.43□□□□□ -0.42
Vti1a-202ENSMUST00000223690 Txndc2Q6P902 515 aa12.41□□□□□ -0.42
Vti1a-202ENSMUST00000223690 Lrrc9Q8CDN9 1456 aa12.41□□□□□ -0.42
Vti1a-202ENSMUST00000223690 Fam208aQ69ZR9 1610 aaKnown RBP12.4□□□□□ -0.42
Vti1a-202ENSMUST00000223690 Shq1Q7TMX5 569 aa12.4□□□□□ -0.42
Vti1a-202ENSMUST00000223690 Dcaf11Q91VU6 549 aa12.39□□□□□ -0.43
Vti1a-202ENSMUST00000223690 Fmn2Q9JL04 1578 aa12.39□□□□□ -0.43
Vti1a-202ENSMUST00000223690 NeflP08551 543 aa12.39□□□□□ -0.43
Vti1a-202ENSMUST00000223690 Puf60Q3UEB3 564 aaKnown RBP12.39□□□□□ -0.43
Vti1a-202ENSMUST00000223690 Znf710Q3U288 666 aa12.39□□□□□ -0.43
Vti1a-202ENSMUST00000223690 Psme1P97371 249 aa12.38□□□□□ -0.43
Vti1a-202ENSMUST00000223690 Ppp4r2Q0VGB7 417 aa12.38□□□□□ -0.43
Vti1a-202ENSMUST00000223690 Utp14aQ640M1 767 aaKnown RBP12.37□□□□□ -0.43
Vti1a-202ENSMUST00000223690 PtprgQ05909 1442 aa12.36□□□□□ -0.43
Vti1a-202ENSMUST00000223690 Polr3aB2RXC6 1390 aa12.36□□□□□ -0.43
Vti1a-202ENSMUST00000223690 Ylpm1Q9R0I7 1386 aaKnown RBP12.36□□□□□ -0.43
Vti1a-202ENSMUST00000223690 Cep170Q6A065 1588 aa12.36□□□□□ -0.43
Vti1a-202ENSMUST00000223690 Arid4bA2CG63 1314 aaKnown RBP12.36□□□□□ -0.43
Vti1a-202ENSMUST00000223690 Rsph4aQ8BYM7 716 aa12.36□□□□□ -0.43
Vti1a-202ENSMUST00000223690 Ptch1Q61115 1434 aa12.35□□□□□ -0.43
Vti1a-202ENSMUST00000223690 Polr3glQ8R0C0 218 aa12.35□□□□□ -0.43
Vti1a-202ENSMUST00000223690 Ncoa1P70365 1447 aa12.35□□□□□ -0.43
Vti1a-202ENSMUST00000223690 Rock1P70335 1354 aa12.35□□□□□ -0.43
Vti1a-202ENSMUST00000223690 Adgrl3Q80TS3 1537 aa12.35□□□□□ -0.43
Vti1a-202ENSMUST00000223690 Fam184bQ0KK56 942 aa12.34□□□□□ -0.43
Vti1a-202ENSMUST00000223690 NgefQ8CHT1 710 aa12.34□□□□□ -0.43
Vti1a-202ENSMUST00000223690 Zscan21Q07231 555 aa12.34□□□□□ -0.43
Vti1a-202ENSMUST00000223690 Plekhg5Q66T02 1073 aa12.34□□□□□ -0.43
Vti1a-202ENSMUST00000223690 Stard8Q8K031 1019 aa12.34□□□□□ -0.43
Vti1a-202ENSMUST00000223690 Q9D9H8 365 aa12.34□□□□□ -0.43
Vti1a-202ENSMUST00000223690 Zscan10Q3URR7 782 aa12.34□□□□□ -0.43
Vti1a-202ENSMUST00000223690 Znf316Q6PGE4 1016 aa12.34□□□□□ -0.43
Vti1a-202ENSMUST00000223690 Chd1P40201 1711 aa12.34□□□□□ -0.43
Vti1a-202ENSMUST00000223690 MlecQ6ZQI3 291 aaKnown RBP12.33□□□□□ -0.43
Vti1a-202ENSMUST00000223690 DroshaQ5HZJ0 1373 aaKnown RBP12.33□□□□□ -0.44
Vti1a-202ENSMUST00000223690 Nolc1E9Q5C9 702 aaKnown RBP12.33□□□□□ -0.44
Vti1a-202ENSMUST00000223690 Mink1Q9JM52 1308 aa12.33□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 82.4 ms