RNA–Protein interactions for RNA: ENSMUST00000223160.1

Trim9-211, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Trim9, Length 3,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-211ENSMUST00000223160 Ttbk1Q6PCN3 1308 aa13.67□□□□□ -0.22
Trim9-211ENSMUST00000223160 Zcchc11B2RX14 1644 aaKnown RBP13.67□□□□□ -0.22
Trim9-211ENSMUST00000223160 Cd109Q8R422 1442 aa13.66□□□□□ -0.22
Trim9-211ENSMUST00000223160 Cnga1P29974 684 aa13.66□□□□□ -0.22
Trim9-211ENSMUST00000223160 Pabpn1Q8CCS6 302 aaKnown RBP13.66□□□□□ -0.22
Trim9-211ENSMUST00000223160 Rpgrip1lQ8CG73 1264 aa13.66□□□□□ -0.22
Trim9-211ENSMUST00000223160 Inpp5dQ9ES52 1191 aa13.66□□□□□ -0.22
Trim9-211ENSMUST00000223160 Clstn2Q9ER65 966 aa13.65□□□□□ -0.22
Trim9-211ENSMUST00000223160 Anp32bQ9EST5 272 aaKnown RBP13.65□□□□□ -0.22
Trim9-211ENSMUST00000223160 Fancd2Q80V62 1450 aa13.65□□□□□ -0.22
Trim9-211ENSMUST00000223160 Dnmt1P13864 1620 aaKnown RBP13.64□□□□□ -0.23
Trim9-211ENSMUST00000223160 Mlh3A0A1Y7VMP7 1443 aa13.64□□□□□ -0.23
Trim9-211ENSMUST00000223160 Pank3Q8R2W9 370 aa13.63□□□□□ -0.23
Trim9-211ENSMUST00000223160 Pbrm1Q8BSQ9 1634 aaKnown RBP13.63□□□□□ -0.23
Trim9-211ENSMUST00000223160 PnisrA2AJT4 805 aaKnown RBP13.63□□□□□ -0.23
Trim9-211ENSMUST00000223160 Setbp1Q9Z180 1582 aa13.62□□□□□ -0.23
Trim9-211ENSMUST00000223160 Pprc1Q6NZN1 1644 aa13.62□□□□□ -0.23
Trim9-211ENSMUST00000223160 Camsap2Q8C1B1 1461 aa13.61□□□□□ -0.23
Trim9-211ENSMUST00000223160 Map3k4O08648 1597 aa13.61□□□□□ -0.23
Trim9-211ENSMUST00000223160 Fhod3Q76LL6 1578 aa13.6□□□□□ -0.23
Trim9-211ENSMUST00000223160 Myom3A2ABU4 1439 aa13.6□□□□□ -0.23
Trim9-211ENSMUST00000223160 Anp32aO35381 247 aa13.6□□□□□ -0.23
Trim9-211ENSMUST00000223160 Atp7aQ64430 1491 aa13.6□□□□□ -0.23
Trim9-211ENSMUST00000223160 Slc4a1apE9PX68 744 aa13.6□□□□□ -0.23
Trim9-211ENSMUST00000223160 Atp10dQ8K2X1 1416 aa13.59□□□□□ -0.23
Trim9-211ENSMUST00000223160 Fan1Q69ZT1 1020 aa13.58□□□□□ -0.23
Trim9-211ENSMUST00000223160 Gm20521D3Z5F7 333 aa13.57□□□□□ -0.24
Trim9-211ENSMUST00000223160 Asxl1P59598 1514 aa13.57□□□□□ -0.24
Trim9-211ENSMUST00000223160 Wdr43Q6ZQL4 677 aaKnown RBP13.57□□□□□ -0.24
Trim9-211ENSMUST00000223160 Abcc1O35379 1528 aa13.56□□□□□ -0.24
Trim9-211ENSMUST00000223160 Rangap1P46061 589 aaKnown RBP13.56□□□□□ -0.24
Trim9-211ENSMUST00000223160 Apbb1Q9QXJ1 710 aa13.56□□□□□ -0.24
Trim9-211ENSMUST00000223160 Rock2P70336 1388 aa13.56□□□□□ -0.24
Trim9-211ENSMUST00000223160 Caskin1Q6P9K8 1431 aa13.56□□□□□ -0.24
Trim9-211ENSMUST00000223160 L3mbtl2P59178 703 aa13.56□□□□□ -0.24
Trim9-211ENSMUST00000223160 Lemd3Q9WU40 921 aa13.55□□□□□ -0.24
Trim9-211ENSMUST00000223160 Esx1O88933 382 aa13.55□□□□□ -0.24
Trim9-211ENSMUST00000223160 Ythdc2B2RR83 1445 aaKnown RBP13.54□□□□□ -0.24
Trim9-211ENSMUST00000223160 Plekhg5Q66T02 1073 aa13.54□□□□□ -0.24
Trim9-211ENSMUST00000223160 Srcin1Q9QWI6 1250 aa13.53□□□□□ -0.24
Trim9-211ENSMUST00000223160 CrbnQ8C7D2 445 aa13.53□□□□□ -0.24
Trim9-211ENSMUST00000223160 Neurod2Q62414 383 aa13.52□□□□□ -0.25
Trim9-211ENSMUST00000223160 Nlrp6Q91WS2 869 aa13.51□□□□□ -0.25
Trim9-211ENSMUST00000223160 Naip6Q9JIB6 1403 aa13.51□□□□□ -0.25
Trim9-211ENSMUST00000223160 Lrrc9Q8CDN9 1456 aa13.51□□□□□ -0.25
Trim9-211ENSMUST00000223160 Eif4g3Q80XI3 1579 aaKnown RBP13.5□□□□□ -0.25
Trim9-211ENSMUST00000223160 Tarbp1E9Q368 1579 aa13.5□□□□□ -0.25
Trim9-211ENSMUST00000223160 Srpk2O54781 681 aaKnown RBP13.5□□□□□ -0.25
Trim9-211ENSMUST00000223160 Fam208aQ69ZR9 1610 aaKnown RBP13.49□□□□□ -0.25
Trim9-211ENSMUST00000223160 PrxO55103 1391 aa13.49□□□□□ -0.25
Trim9-211ENSMUST00000223160 Polr3glQ8R0C0 218 aa13.49□□□□□ -0.25
Trim9-211ENSMUST00000223160 Dot1lQ6XZL8 1540 aa13.49□□□□□ -0.25
Trim9-211ENSMUST00000223160 Zscan21Q07231 555 aa13.48□□□□□ -0.25
Trim9-211ENSMUST00000223160 Supt16hQ920B9 1047 aa13.48□□□□□ -0.25
Trim9-211ENSMUST00000223160 Pak3Q61036 559 aa13.48□□□□□ -0.25
Trim9-211ENSMUST00000223160 Stk26Q99JT2 416 aa13.48□□□□□ -0.25
Trim9-211ENSMUST00000223160 Polr3aB2RXC6 1390 aa13.47□□□□□ -0.25
Trim9-211ENSMUST00000223160 PtprgQ05909 1442 aa13.47□□□□□ -0.25
Trim9-211ENSMUST00000223160 Lamc1P02468 1607 aaKnown RBP13.47□□□□□ -0.25
Trim9-211ENSMUST00000223160 Zfp444Q3TDV8 331 aaKnown RBP13.47□□□□□ -0.25
Trim9-211ENSMUST00000223160 Zscan10Q3URR7 782 aa13.47□□□□□ -0.25
Trim9-211ENSMUST00000223160 Mbd5B1AYB6 1498 aa13.47□□□□□ -0.25
Trim9-211ENSMUST00000223160 NeflP08551 543 aa13.47□□□□□ -0.25
Trim9-211ENSMUST00000223160 Myt1Q8CFC2 1127 aa13.47□□□□□ -0.25
Trim9-211ENSMUST00000223160 Zranb1Q7M760 708 aa13.46□□□□□ -0.25
Trim9-211ENSMUST00000223160 Dcaf11Q91VU6 549 aa13.46□□□□□ -0.25
Trim9-211ENSMUST00000223160 AI481877A2ALV5 1481 aa13.46□□□□□ -0.25
Trim9-211ENSMUST00000223160 RalgapbQ8BQZ4 1484 aa13.46□□□□□ -0.25
Trim9-211ENSMUST00000223160 Trpm2Q91YD4 1506 aa13.46□□□□□ -0.25
Trim9-211ENSMUST00000223160 Fmn2Q9JL04 1578 aa13.46□□□□□ -0.26
Trim9-211ENSMUST00000223160 Usp40Q8BWR4 1235 aa13.46□□□□□ -0.26
Trim9-211ENSMUST00000223160 Rrbp1Q99PL5 1605 aaKnown RBP13.44□□□□□ -0.26
Trim9-211ENSMUST00000223160 Prdm16A2A935 1275 aa13.44□□□□□ -0.26
Trim9-211ENSMUST00000223160 Tmf1B9EKI3 1091 aa13.43□□□□□ -0.26
Trim9-211ENSMUST00000223160 Tcerg1Q8CGF7 1100 aaKnown RBP13.43□□□□□ -0.26
Trim9-211ENSMUST00000223160 PtprtQ99M80 1454 aa13.43□□□□□ -0.26
Trim9-211ENSMUST00000223160 Gtf2e1Q9D0D5 440 aa13.43□□□□□ -0.26
Trim9-211ENSMUST00000223160 Trim26Q99PN3 545 aa13.42□□□□□ -0.26
Trim9-211ENSMUST00000223160 Adgrl2Q8JZZ7 1487 aa13.41□□□□□ -0.26
Trim9-211ENSMUST00000223160 Mak16Q8BGS0 296 aaKnown RBP13.41□□□□□ -0.26
Trim9-211ENSMUST00000223160 Gm32742A0A1B0GT42 1604 aa13.41□□□□□ -0.26
Trim9-211ENSMUST00000223160 Edc4Q3UJB9 1406 aaKnown RBP13.41□□□□□ -0.26
Trim9-211ENSMUST00000223160 Erbb3Q61526 1339 aa13.41□□□□□ -0.26
Trim9-211ENSMUST00000223160 Cdc42bpbQ7TT50 1713 aa13.41□□□□□ -0.26
Trim9-211ENSMUST00000223160 Stag3O70576 1240 aa13.41□□□□□ -0.26
Trim9-211ENSMUST00000223160 Ttc21bQ0HA38 1315 aa13.4□□□□□ -0.26
Trim9-211ENSMUST00000223160 Senp3Q9EP97 568 aaKnown RBP13.4□□□□□ -0.26
Trim9-211ENSMUST00000223160 Fam184bQ0KK56 942 aa13.4□□□□□ -0.27
Trim9-211ENSMUST00000223160 Dbr1Q923B1 550 aa13.4□□□□□ -0.27
Trim9-211ENSMUST00000223160 Chd1P40201 1711 aa13.39□□□□□ -0.27
Trim9-211ENSMUST00000223160 Kif21bQ9QXL1 1668 aa13.39□□□□□ -0.27
Trim9-211ENSMUST00000223160 B4galnt3Q6L8S8 986 aa13.38□□□□□ -0.27
Trim9-211ENSMUST00000223160 Cpsf1Q9EPU4 1441 aaKnown RBP13.38□□□□□ -0.27
Trim9-211ENSMUST00000223160 Ppp2r1aQ76MZ3 589 aa13.38□□□□□ -0.27
Trim9-211ENSMUST00000223160 Kif7B7ZNG0 1348 aa13.38□□□□□ -0.27
Trim9-211ENSMUST00000223160 Rock1P70335 1354 aa13.38□□□□□ -0.27
Trim9-211ENSMUST00000223160 Ppp1r18Q8BQ30 594 aa13.37□□□□□ -0.27
Trim9-211ENSMUST00000223160 Usp54Q8BL06 1588 aaKnown RBP13.36□□□□□ -0.27
Trim9-211ENSMUST00000223160 Dnajc5P60904 198 aa13.36□□□□□ -0.27
Trim9-211ENSMUST00000223160 ErbinQ80TH2 1402 aa13.36□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 68.5 ms