RNA–Protein interactions for RNA: ENSMUST00000221041.1

Trim9-205, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 3,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-205ENSMUST00000221041 Speer4f1Q9D5Q6 258 aa13.9□□□□□ -0.18
Trim9-205ENSMUST00000221041 Cd109Q8R422 1442 aa13.9□□□□□ -0.18
Trim9-205ENSMUST00000221041 Upf2A2AT37 1269 aaKnown RBP13.9□□□□□ -0.18
Trim9-205ENSMUST00000221041 Shroom2A2ALU4 1481 aa13.89□□□□□ -0.19
Trim9-205ENSMUST00000221041 Washc2Q6PGL7 1334 aa13.89□□□□□ -0.19
Trim9-205ENSMUST00000221041 4933416C03RikQ3V063 378 aa13.89□□□□□ -0.19
Trim9-205ENSMUST00000221041 Rtl5Q5DTT4 599 aa13.88□□□□□ -0.19
Trim9-205ENSMUST00000221041 Fgd6Q69ZL1 1399 aa13.88□□□□□ -0.19
Trim9-205ENSMUST00000221041 L3mbtl2P59178 703 aa13.88□□□□□ -0.19
Trim9-205ENSMUST00000221041 Dennd4bQ3U1Y4 1499 aa13.88□□□□□ -0.19
Trim9-205ENSMUST00000221041 Arhgap5P97393 1501 aa13.88□□□□□ -0.19
Trim9-205ENSMUST00000221041 Zscan10Q3URR7 782 aa13.87□□□□□ -0.19
Trim9-205ENSMUST00000221041 Plekhg5Q66T02 1073 aa13.87□□□□□ -0.19
Trim9-205ENSMUST00000221041 Armcx1Q9CX83 456 aa13.87□□□□□ -0.19
Trim9-205ENSMUST00000221041 DiexfQ8BTT6 772 aaKnown RBP13.86□□□□□ -0.19
Trim9-205ENSMUST00000221041 Senp3Q9EP97 568 aaKnown RBP13.86□□□□□ -0.19
Trim9-205ENSMUST00000221041 Rfx7F8VPJ6 1459 aa13.86□□□□□ -0.19
Trim9-205ENSMUST00000221041 Myom3A2ABU4 1439 aa13.86□□□□□ -0.19
Trim9-205ENSMUST00000221041 DaxxO35613 739 aa13.85□□□□□ -0.19
Trim9-205ENSMUST00000221041 Usp40Q8BWR4 1235 aa13.85□□□□□ -0.19
Trim9-205ENSMUST00000221041 Peg3Q3URU2 1571 aa13.85□□□□□ -0.19
Trim9-205ENSMUST00000221041 Tcerg1Q8CGF7 1100 aaKnown RBP13.85□□□□□ -0.19
Trim9-205ENSMUST00000221041 Exosc9Q9JHI7 438 aaKnown RBP13.85□□□□□ -0.19
Trim9-205ENSMUST00000221041 Trappc8E9PWG2 1437 aa13.85□□□□□ -0.19
Trim9-205ENSMUST00000221041 Zfp444Q3TDV8 331 aaKnown RBP13.84□□□□□ -0.19
Trim9-205ENSMUST00000221041 Prex2Q3LAC4 1598 aa13.84□□□□□ -0.19
Trim9-205ENSMUST00000221041 Gm14025A2AP89 1413 aa13.83□□□□□ -0.2
Trim9-205ENSMUST00000221041 Fam184bQ0KK56 942 aa13.82□□□□□ -0.2
Trim9-205ENSMUST00000221041 Rapgef6Q5NCJ1 1609 aa13.82□□□□□ -0.2
Trim9-205ENSMUST00000221041 IqubQ8CDK3 788 aa13.82□□□□□ -0.2
Trim9-205ENSMUST00000221041 Pik3c2gO70167 1506 aa13.82□□□□□ -0.2
Trim9-205ENSMUST00000221041 Nup160Q9Z0W3 1402 aaKnown RBP13.81□□□□□ -0.2
Trim9-205ENSMUST00000221041 Adcy10Q8C0T9 1614 aa13.8□□□□□ -0.2
Trim9-205ENSMUST00000221041 Abca5Q8K448 1642 aa13.8□□□□□ -0.2
Trim9-205ENSMUST00000221041 Trim30dE9PWL0 497 aa13.79□□□□□ -0.2
Trim9-205ENSMUST00000221041 4930567H17RikQ3V0K5 233 aa13.79□□□□□ -0.2
Trim9-205ENSMUST00000221041 Kdm6bQ5NCY0 1641 aa13.79□□□□□ -0.2
Trim9-205ENSMUST00000221041 Rwdd1Q9CQK7 243 aa13.79□□□□□ -0.2
Trim9-205ENSMUST00000221041 Kif7B7ZNG0 1348 aa13.79□□□□□ -0.2
Trim9-205ENSMUST00000221041 ChgaP26339 463 aaKnown RBP13.78□□□□□ -0.2
Trim9-205ENSMUST00000221041 CanxP35564 591 aaKnown RBP13.78□□□□□ -0.2
Trim9-205ENSMUST00000221041 Amer1Q7TS75 1132 aa13.77□□□□□ -0.2
Trim9-205ENSMUST00000221041 Wdr7Q920I9 1489 aa13.77□□□□□ -0.2
Trim9-205ENSMUST00000221041 PrxO55103 1391 aa13.77□□□□□ -0.2
Trim9-205ENSMUST00000221041 Znf316Q6PGE4 1016 aa13.77□□□□□ -0.21
Trim9-205ENSMUST00000221041 Golga2Q921M4 999 aa13.77□□□□□ -0.21
Trim9-205ENSMUST00000221041 Plin1Q8CGN5 517 aa13.76□□□□□ -0.21
Trim9-205ENSMUST00000221041 Prdm16A2A935 1275 aa13.76□□□□□ -0.21
Trim9-205ENSMUST00000221041 Adamts12Q811B3 1600 aa13.76□□□□□ -0.21
Trim9-205ENSMUST00000221041 Ppp1r18Q8BQ30 594 aa13.76□□□□□ -0.21
Trim9-205ENSMUST00000221041 Mlh3A0A1Y7VMP7 1443 aa13.75□□□□□ -0.21
Trim9-205ENSMUST00000221041 Rock1P70335 1354 aa13.75□□□□□ -0.21
Trim9-205ENSMUST00000221041 Kdm3bQ6ZPY7 1562 aa13.75□□□□□ -0.21
Trim9-205ENSMUST00000221041 Ppp2r1aQ76MZ3 589 aa13.75□□□□□ -0.21
Trim9-205ENSMUST00000221041 U2af1Q9D883 239 aaKnown RBP13.75□□□□□ -0.21
Trim9-205ENSMUST00000221041 Mug2P28666 1451 aa13.74□□□□□ -0.21
Trim9-205ENSMUST00000221041 Chmp5Q9D7S9 219 aa13.74□□□□□ -0.21
Trim9-205ENSMUST00000221041 Ssh2Q5SW75 1423 aa13.73□□□□□ -0.21
Trim9-205ENSMUST00000221041 AlkP97793 1621 aa13.72□□□□□ -0.21
Trim9-205ENSMUST00000221041 Atp7aQ64430 1491 aa13.72□□□□□ -0.21
Trim9-205ENSMUST00000221041 Camsap2Q8C1B1 1461 aa13.72□□□□□ -0.21
Trim9-205ENSMUST00000221041 Cdk13Q69ZA1 1511 aaKnown RBP13.72□□□□□ -0.21
Trim9-205ENSMUST00000221041 Puf60Q3UEB3 564 aaKnown RBP13.72□□□□□ -0.21
Trim9-205ENSMUST00000221041 NgefQ8CHT1 710 aa13.72□□□□□ -0.21
Trim9-205ENSMUST00000221041 SphkapQ6NSW3 1687 aa13.7□□□□□ -0.22
Trim9-205ENSMUST00000221041 Polr3aB2RXC6 1390 aa13.7□□□□□ -0.22
Trim9-205ENSMUST00000221041 ErbinQ80TH2 1402 aa13.69□□□□□ -0.22
Trim9-205ENSMUST00000221041 Mink1Q9JM52 1308 aa13.69□□□□□ -0.22
Trim9-205ENSMUST00000221041 Gm6268A2A3U9 297 aa13.69□□□□□ -0.22
Trim9-205ENSMUST00000221041 Znf330Q922H9 316 aa13.69□□□□□ -0.22
Trim9-205ENSMUST00000221041 Fancd2Q80V62 1450 aa13.69□□□□□ -0.22
Trim9-205ENSMUST00000221041 Arhgef11Q68FM7 1552 aa13.68□□□□□ -0.22
Trim9-205ENSMUST00000221041 Caskin1Q6P9K8 1431 aa13.67□□□□□ -0.22
Trim9-205ENSMUST00000221041 Atp10dQ8K2X1 1416 aa13.67□□□□□ -0.22
Trim9-205ENSMUST00000221041 Nsd2Q8BVE8 1365 aa13.67□□□□□ -0.22
Trim9-205ENSMUST00000221041 Shq1Q7TMX5 569 aa13.67□□□□□ -0.22
Trim9-205ENSMUST00000221041 Pabpn1Q8CCS6 302 aaKnown RBP13.67□□□□□ -0.22
Trim9-205ENSMUST00000221041 Cluap1Q8R3P7 413 aa13.67□□□□□ -0.22
Trim9-205ENSMUST00000221041 Ksr2Q3UVC0 959 aa13.67□□□□□ -0.22
Trim9-205ENSMUST00000221041 Zranb1Q7M760 708 aa13.67□□□□□ -0.22
Trim9-205ENSMUST00000221041 Abca16E9PWJ7 1678 aa13.66□□□□□ -0.22
Trim9-205ENSMUST00000221041 Kif16bB1AVY7 1312 aa13.66□□□□□ -0.22
Trim9-205ENSMUST00000221041 Ccdc30Q8BVF4 654 aa13.66□□□□□ -0.22
Trim9-205ENSMUST00000221041 Arid4bA2CG63 1314 aaKnown RBP13.66□□□□□ -0.22
Trim9-205ENSMUST00000221041 Birc3O08863 600 aa13.66□□□□□ -0.22
Trim9-205ENSMUST00000221041 Gcc2Q8CHG3 1679 aa13.66□□□□□ -0.22
Trim9-205ENSMUST00000221041 Utp14aQ640M1 767 aaKnown RBP13.66□□□□□ -0.22
Trim9-205ENSMUST00000221041 Apaf1O88879 1249 aa13.65□□□□□ -0.22
Trim9-205ENSMUST00000221041 Liat1Q810M6 228 aa13.65□□□□□ -0.22
Trim9-205ENSMUST00000221041 Hsp90ab1P11499 724 aaKnown RBP13.65□□□□□ -0.23
Trim9-205ENSMUST00000221041 Ttc21bQ0HA38 1315 aa13.64□□□□□ -0.23
Trim9-205ENSMUST00000221041 1700019A02RikA0A087WPV9 146 aa13.64□□□□□ -0.23
Trim9-205ENSMUST00000221041 Tsen2Q6P7W5 460 aa13.64□□□□□ -0.23
Trim9-205ENSMUST00000221041 Safb2Q80YR5 991 aaKnown RBP13.64□□□□□ -0.23
Trim9-205ENSMUST00000221041 Pank1Q8K4K6 548 aa13.63□□□□□ -0.23
Trim9-205ENSMUST00000221041 Abcc2Q8VI47 1543 aa13.63□□□□□ -0.23
Trim9-205ENSMUST00000221041 Irx6Q9ER75 438 aa13.63□□□□□ -0.23
Trim9-205ENSMUST00000221041 Asxl1P59598 1514 aa13.63□□□□□ -0.23
Trim9-205ENSMUST00000221041 Mapk8ip3Q9ESN9 1337 aa13.63□□□□□ -0.23
Trim9-205ENSMUST00000221041 Ttll13A4Q9F6 804 aa13.62□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 152.6 ms