RNA–Protein interactions for RNA: ENSMUST00000213874.1

Usp28-203, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp28, Length 4,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-203ENSMUST00000213874 Pank1Q8K4K6 548 aa12.09□□□□□ -0.47
Usp28-203ENSMUST00000213874 Ankrd26Q811D2 1581 aa12.09□□□□□ -0.47
Usp28-203ENSMUST00000213874 Nup155Q99P88 1391 aaKnown RBP12.08□□□□□ -0.48
Usp28-203ENSMUST00000213874 Tspyl2Q7TQI8 677 aa12.08□□□□□ -0.48
Usp28-203ENSMUST00000213874 Erbb3Q61526 1339 aa12.07□□□□□ -0.48
Usp28-203ENSMUST00000213874 Duox2A2AQ99 1517 aa12.06□□□□□ -0.48
Usp28-203ENSMUST00000213874 Ak7Q9D2H2 614 aa12.05□□□□□ -0.48
Usp28-203ENSMUST00000213874 Ncoa2Q61026 1462 aa12.05□□□□□ -0.48
Usp28-203ENSMUST00000213874 Plcb2A3KGF7 1181 aa12.05□□□□□ -0.48
Usp28-203ENSMUST00000213874 Irx6Q9ER75 438 aa12.05□□□□□ -0.48
Usp28-203ENSMUST00000213874 Plekhh2Q8C115 1491 aa12.04□□□□□ -0.48
Usp28-203ENSMUST00000213874 Soga1E1U8D0 1418 aa12.04□□□□□ -0.48
Usp28-203ENSMUST00000213874 EspnQ9ET47 871 aa12.04□□□□□ -0.48
Usp28-203ENSMUST00000213874 Fan1Q69ZT1 1020 aa12.04□□□□□ -0.48
Usp28-203ENSMUST00000213874 Stk26Q99JT2 416 aa12.03□□□□□ -0.48
Usp28-203ENSMUST00000213874 Arid3cA6PWV5 409 aa12.03□□□□□ -0.48
Usp28-203ENSMUST00000213874 KarsQ99MN1 595 aaKnown RBP12.03□□□□□ -0.48
Usp28-203ENSMUST00000213874 Ift140E9PY46 1464 aa12.03□□□□□ -0.48
Usp28-203ENSMUST00000213874 Efcab5A0JP43 1406 aa12.02□□□□□ -0.48
Usp28-203ENSMUST00000213874 Mfap1aC0HKD8 439 aaKnown RBP12.02□□□□□ -0.49
Usp28-203ENSMUST00000213874 Mfap1bC0HKD9 439 aaKnown RBP12.02□□□□□ -0.49
Usp28-203ENSMUST00000213874 1700019A02RikA0A087WPV9 146 aa12.02□□□□□ -0.49
Usp28-203ENSMUST00000213874 Nutm1Q8BHP2 1126 aa12.02□□□□□ -0.49
Usp28-203ENSMUST00000213874 Camsap1A2AHC3 1581 aa12.02□□□□□ -0.49
Usp28-203ENSMUST00000213874 Stk11ipQ3TAA7 1072 aa12.01□□□□□ -0.49
Usp28-203ENSMUST00000213874 NudcO35685 332 aaKnown RBP12.01□□□□□ -0.49
Usp28-203ENSMUST00000213874 Sart1Q9Z315 806 aaKnown RBP12.01□□□□□ -0.49
Usp28-203ENSMUST00000213874 Gm1043A0A140LJC2 1431 aa12.01□□□□□ -0.49
Usp28-203ENSMUST00000213874 Wdr62Q3U3T8 1523 aa12.01□□□□□ -0.49
Usp28-203ENSMUST00000213874 Ncoa1P70365 1447 aa12.01□□□□□ -0.49
Usp28-203ENSMUST00000213874 Gas2l2Q5SSG4 860 aa12.01□□□□□ -0.49
Usp28-203ENSMUST00000213874 Rock2P70336 1388 aa12□□□□□ -0.49
Usp28-203ENSMUST00000213874 Zscan10Q3URR7 782 aa12□□□□□ -0.49
Usp28-203ENSMUST00000213874 Srcin1Q9QWI6 1250 aa12□□□□□ -0.49
Usp28-203ENSMUST00000213874 Sall3Q62255 1320 aa12□□□□□ -0.49
Usp28-203ENSMUST00000213874 GorabQ8BRM2 368 aa12□□□□□ -0.49
Usp28-203ENSMUST00000213874 Chmp4cQ9D7F7 232 aa11.99□□□□□ -0.49
Usp28-203ENSMUST00000213874 Srpk2O54781 681 aaKnown RBP11.98□□□□□ -0.49
Usp28-203ENSMUST00000213874 Tmco5bQ80X59 307 aa11.98□□□□□ -0.49
Usp28-203ENSMUST00000213874 Atxn3Q9CVD2 355 aa11.98□□□□□ -0.49
Usp28-203ENSMUST00000213874 Tmf1B9EKI3 1091 aa11.98□□□□□ -0.49
Usp28-203ENSMUST00000213874 Ksr2Q3UVC0 959 aa11.98□□□□□ -0.49
Usp28-203ENSMUST00000213874 Golga2Q921M4 999 aa11.98□□□□□ -0.49
Usp28-203ENSMUST00000213874 Fam135aQ6NS59 1506 aa11.98□□□□□ -0.49
Usp28-203ENSMUST00000213874 Paxip1Q6NZQ4 1056 aa11.97□□□□□ -0.49
Usp28-203ENSMUST00000213874 Kif16bB1AVY7 1312 aa11.97□□□□□ -0.49
Usp28-203ENSMUST00000213874 Ppm1gQ61074 542 aa11.97□□□□□ -0.49
Usp28-203ENSMUST00000213874 Cc2d2bA0A286YDU8 1405 aa11.97□□□□□ -0.49
Usp28-203ENSMUST00000213874 Abcc5Q9R1X5 1436 aa11.97□□□□□ -0.49
Usp28-203ENSMUST00000213874 Apaf1O88879 1249 aa11.96□□□□□ -0.49
Usp28-203ENSMUST00000213874 Map3k1P53349 1493 aa11.96□□□□□ -0.49
Usp28-203ENSMUST00000213874 Lmod3E9QA62 571 aa11.96□□□□□ -0.5
Usp28-203ENSMUST00000213874 U2af1Q9D883 239 aaKnown RBP11.96□□□□□ -0.5
Usp28-203ENSMUST00000213874 Kif7B7ZNG0 1348 aa11.96□□□□□ -0.5
Usp28-203ENSMUST00000213874 Rfx1P48377 963 aa11.96□□□□□ -0.5
Usp28-203ENSMUST00000213874 Ccdc30Q8BVF4 654 aa11.96□□□□□ -0.5
Usp28-203ENSMUST00000213874 Prkrip1Q9CWV6 186 aaKnown RBP11.96□□□□□ -0.5
Usp28-203ENSMUST00000213874 AknaQ80VW7 1404 aa11.95□□□□□ -0.5
Usp28-203ENSMUST00000213874 CadpsQ80TJ1 1355 aa11.95□□□□□ -0.5
Usp28-203ENSMUST00000213874 Fam43aQ8BUP8 424 aa11.95□□□□□ -0.5
Usp28-203ENSMUST00000213874 Eif4g1Q6NZJ6 1600 aaKnown RBP11.95□□□□□ -0.5
Usp28-203ENSMUST00000213874 Nectin2P32507 530 aa11.95□□□□□ -0.5
Usp28-203ENSMUST00000213874 NexmifQ5DTT1 1515 aa11.94□□□□□ -0.5
Usp28-203ENSMUST00000213874 Stag3O70576 1240 aa11.94□□□□□ -0.5
Usp28-203ENSMUST00000213874 Dusp27Q148W8 1138 aa11.94□□□□□ -0.5
Usp28-203ENSMUST00000213874 Ipo8Q7TMY7 1010 aa11.94□□□□□ -0.5
Usp28-203ENSMUST00000213874 Plcd3Q8K2J0 785 aa11.94□□□□□ -0.5
Usp28-203ENSMUST00000213874 Dhx57Q6P5D3 1388 aaKnown RBP11.93□□□□□ -0.5
Usp28-203ENSMUST00000213874 Tnnt2P50752 301 aa11.93□□□□□ -0.5
Usp28-203ENSMUST00000213874 Ppp2r1aQ76MZ3 589 aa11.93□□□□□ -0.5
Usp28-203ENSMUST00000213874 Zranb1Q7M760 708 aa11.93□□□□□ -0.5
Usp28-203ENSMUST00000213874 Rock1P70335 1354 aa11.93□□□□□ -0.5
Usp28-203ENSMUST00000213874 Pibf1E9Q6K3 756 aa11.93□□□□□ -0.5
Usp28-203ENSMUST00000213874 PogzQ8BZH4 1409 aaKnown RBP11.92□□□□□ -0.5
Usp28-203ENSMUST00000213874 SlkO54988 1233 aa11.92□□□□□ -0.5
Usp28-203ENSMUST00000213874 Kif3bQ61771 747 aa11.92□□□□□ -0.5
Usp28-203ENSMUST00000213874 Clstn2Q9ER65 966 aa11.92□□□□□ -0.5
Usp28-203ENSMUST00000213874 Aplp1Q03157 653 aa11.92□□□□□ -0.5
Usp28-203ENSMUST00000213874 Tshz2Q68FE9 1030 aa11.92□□□□□ -0.5
Usp28-203ENSMUST00000213874 Map3k5O35099 1380 aa11.91□□□□□ -0.5
Usp28-203ENSMUST00000213874 PrxO55103 1391 aa11.9□□□□□ -0.5
Usp28-203ENSMUST00000213874 Gtf2e1Q9D0D5 440 aa11.9□□□□□ -0.5
Usp28-203ENSMUST00000213874 Fam184bQ0KK56 942 aa11.9□□□□□ -0.5
Usp28-203ENSMUST00000213874 Plekhg5Q66T02 1073 aa11.9□□□□□ -0.5
Usp28-203ENSMUST00000213874 Exosc9Q9JHI7 438 aaKnown RBP11.9□□□□□ -0.5
Usp28-203ENSMUST00000213874 EprsQ8CGC7 1512 aaKnown RBP11.9□□□□□ -0.51
Usp28-203ENSMUST00000213874 Mug1P28665 1476 aa11.89□□□□□ -0.51
Usp28-203ENSMUST00000213874 Mrc2Q64449 1479 aa11.89□□□□□ -0.51
Usp28-203ENSMUST00000213874 Pnmal2G3X9N3 661 aa11.88□□□□□ -0.51
Usp28-203ENSMUST00000213874 Chmp4bQ9D8B3 224 aaKnown RBP11.88□□□□□ -0.51
Usp28-203ENSMUST00000213874 Irf5P56477 497 aa11.88□□□□□ -0.51
Usp28-203ENSMUST00000213874 U2surpQ6NV83 1029 aaKnown RBP11.88□□□□□ -0.51
Usp28-203ENSMUST00000213874 Tnpo1Q8BFY9 898 aaKnown RBP11.88□□□□□ -0.51
Usp28-203ENSMUST00000213874 BC005561E9Q5E2 1589 aa11.88□□□□□ -0.51
Usp28-203ENSMUST00000213874 Urb2E9Q7L1 1524 aaKnown RBP11.88□□□□□ -0.51
Usp28-203ENSMUST00000213874 Usp40Q8BWR4 1235 aa11.88□□□□□ -0.51
Usp28-203ENSMUST00000213874 Ncoa3O09000 1398 aa11.87□□□□□ -0.51
Usp28-203ENSMUST00000213874 Ccdc183A2AJB1 534 aa11.87□□□□□ -0.51
Usp28-203ENSMUST00000213874 Samd9lQ69Z37 1561 aa11.87□□□□□ -0.51
Usp28-203ENSMUST00000213874 Ubap1lG3UW59 384 aa11.87□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms