RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 Atp10aO54827 1508 aa10.68□□□□□ -0.7
Usp40-204ENSMUST00000187758 PtprgQ05909 1442 aa10.68□□□□□ -0.7
Usp40-204ENSMUST00000187758 Ptch1Q61115 1434 aa10.68□□□□□ -0.7
Usp40-204ENSMUST00000187758 Pik3c2gO70167 1506 aa10.68□□□□□ -0.7
Usp40-204ENSMUST00000187758 Znf518aB2RRF6 1478 aaKnown RBP10.67□□□□□ -0.7
Usp40-204ENSMUST00000187758 Kdm5cP41230 1554 aa10.67□□□□□ -0.7
Usp40-204ENSMUST00000187758 Xrn1P97789 1719 aaKnown RBP10.67□□□□□ -0.7
Usp40-204ENSMUST00000187758 Naip5Q9R016 1403 aa10.67□□□□□ -0.7
Usp40-204ENSMUST00000187758 Hdac5Q9Z2V6 1113 aa10.67□□□□□ -0.7
Usp40-204ENSMUST00000187758 Nsd2Q8BVE8 1365 aa10.66□□□□□ -0.7
Usp40-204ENSMUST00000187758 Kif1bQ60575 1816 aaKnown RBP10.66□□□□□ -0.7
Usp40-204ENSMUST00000187758 Abca17E9PX95 1733 aa10.66□□□□□ -0.7
Usp40-204ENSMUST00000187758 Rgl3Q3UYI5 709 aa10.66□□□□□ -0.7
Usp40-204ENSMUST00000187758 Synj2Q9D2G5 1434 aa10.65□□□□□ -0.7
Usp40-204ENSMUST00000187758 Erich6D3Z6S9 713 aa10.65□□□□□ -0.71
Usp40-204ENSMUST00000187758 Asxl1P59598 1514 aa10.64□□□□□ -0.71
Usp40-204ENSMUST00000187758 Myom3A2ABU4 1439 aa10.64□□□□□ -0.71
Usp40-204ENSMUST00000187758 ClspnQ80YR7 1315 aa10.64□□□□□ -0.71
Usp40-204ENSMUST00000187758 DroshaQ5HZJ0 1373 aaKnown RBP10.64□□□□□ -0.71
Usp40-204ENSMUST00000187758 Gli2Q0VGT2 1544 aa10.63□□□□□ -0.71
Usp40-204ENSMUST00000187758 AdgbG3UZ78 1657 aa10.63□□□□□ -0.71
Usp40-204ENSMUST00000187758 ShprhQ7TPQ3 1674 aa10.63□□□□□ -0.71
Usp40-204ENSMUST00000187758 Dip2cE9PWR4 1557 aa10.63□□□□□ -0.71
Usp40-204ENSMUST00000187758 Kiaa0556Q8C753 1610 aa10.63□□□□□ -0.71
Usp40-204ENSMUST00000187758 Plch2A2AP18 1501 aa10.63□□□□□ -0.71
Usp40-204ENSMUST00000187758 Ppargc1bQ8VHJ7 1014 aa10.63□□□□□ -0.71
Usp40-204ENSMUST00000187758 Atp7aQ64430 1491 aa10.62□□□□□ -0.71
Usp40-204ENSMUST00000187758 RereQ80TZ9 1558 aa10.62□□□□□ -0.71
Usp40-204ENSMUST00000187758 Sall2Q9QX96 1004 aa10.62□□□□□ -0.71
Usp40-204ENSMUST00000187758 Cdc42bpgQ80UW5 1551 aa10.61□□□□□ -0.71
Usp40-204ENSMUST00000187758 Fndc1E9Q043 1732 aa10.61□□□□□ -0.71
Usp40-204ENSMUST00000187758 Ylpm1Q9R0I7 1386 aaKnown RBP10.61□□□□□ -0.71
Usp40-204ENSMUST00000187758 Kif14L0N7N1 1674 aaKnown RBP10.61□□□□□ -0.71
Usp40-204ENSMUST00000187758 Hecw2Q6I6G8 1578 aa10.61□□□□□ -0.71
Usp40-204ENSMUST00000187758 Yeats2Q3TUF7 1407 aa10.6□□□□□ -0.71
Usp40-204ENSMUST00000187758 Naip6Q9JIB6 1403 aa10.6□□□□□ -0.71
Usp40-204ENSMUST00000187758 Dnajc5P60904 198 aa10.6□□□□□ -0.71
Usp40-204ENSMUST00000187758 Camsap2Q8C1B1 1461 aa10.6□□□□□ -0.71
Usp40-204ENSMUST00000187758 Robo2Q7TPD3 1470 aa10.59□□□□□ -0.71
Usp40-204ENSMUST00000187758 Myo5cE9Q1F5 1742 aa10.59□□□□□ -0.71
Usp40-204ENSMUST00000187758 Rock1P70335 1354 aa10.58□□□□□ -0.72
Usp40-204ENSMUST00000187758 Topbp1Q6ZQF0 1515 aa10.58□□□□□ -0.72
Usp40-204ENSMUST00000187758 Ttc21bQ0HA38 1315 aa10.58□□□□□ -0.72
Usp40-204ENSMUST00000187758 Gm13697A2AK42 830 aa10.57□□□□□ -0.72
Usp40-204ENSMUST00000187758 Plppr3Q7TPB0 716 aa10.57□□□□□ -0.72
Usp40-204ENSMUST00000187758 Dot1lQ6XZL8 1540 aa10.57□□□□□ -0.72
Usp40-204ENSMUST00000187758 Grwd1Q810D6 446 aaKnown RBP10.57□□□□□ -0.72
Usp40-204ENSMUST00000187758 Myt1Q8CFC2 1127 aa10.57□□□□□ -0.72
Usp40-204ENSMUST00000187758 Mroh3A0A1D5RM54 893 aa10.56□□□□□ -0.72
Usp40-204ENSMUST00000187758 Cfap65Q3V0B4 1847 aa10.56□□□□□ -0.72
Usp40-204ENSMUST00000187758 Abca6Q8K441 1624 aa10.56□□□□□ -0.72
Usp40-204ENSMUST00000187758 Cul9Q80TT8 1865 aa10.55□□□□□ -0.72
Usp40-204ENSMUST00000187758 Uggt2E9Q4X2 1504 aa10.55□□□□□ -0.72
Usp40-204ENSMUST00000187758 Ppip5k1A2ARP1 1436 aa10.55□□□□□ -0.72
Usp40-204ENSMUST00000187758 Washc2Q6PGL7 1334 aa10.54□□□□□ -0.72
Usp40-204ENSMUST00000187758 Rsph4aQ8BYM7 716 aa10.54□□□□□ -0.72
Usp40-204ENSMUST00000187758 Stk24Q99KH8 431 aa10.54□□□□□ -0.72
Usp40-204ENSMUST00000187758 Tarbp1E9Q368 1579 aa10.54□□□□□ -0.72
Usp40-204ENSMUST00000187758 Edc4Q3UJB9 1406 aaKnown RBP10.54□□□□□ -0.72
Usp40-204ENSMUST00000187758 NpatQ8BMA5 1420 aa10.54□□□□□ -0.72
Usp40-204ENSMUST00000187758 ErbinQ80TH2 1402 aa10.54□□□□□ -0.72
Usp40-204ENSMUST00000187758 Prex1Q69ZK0 1650 aa10.53□□□□□ -0.72
Usp40-204ENSMUST00000187758 AnkarA2RT91 1465 aa10.52□□□□□ -0.72
Usp40-204ENSMUST00000187758 Trpm1Q2TV84 1622 aa10.51□□□□□ -0.73
Usp40-204ENSMUST00000187758 Dapk1Q80YE7 1442 aa10.51□□□□□ -0.73
Usp40-204ENSMUST00000187758 Ifit1bl1D3Z6F0 470 aa10.51□□□□□ -0.73
Usp40-204ENSMUST00000187758 Afap1Q80YS6 731 aa10.51□□□□□ -0.73
Usp40-204ENSMUST00000187758 Rundc1Q0VDN7 615 aa10.5□□□□□ -0.73
Usp40-204ENSMUST00000187758 Card11Q8CIS0 1159 aa10.5□□□□□ -0.73
Usp40-204ENSMUST00000187758 Talpid3E9PV87 1520 aa10.5□□□□□ -0.73
Usp40-204ENSMUST00000187758 Zmym4A2A791 1549 aaKnown RBP10.5□□□□□ -0.73
Usp40-204ENSMUST00000187758 Sin3aQ60520 1274 aaKnown RBP10.5□□□□□ -0.73
Usp40-204ENSMUST00000187758 Os9Q8K2C7 672 aa10.5□□□□□ -0.73
Usp40-204ENSMUST00000187758 Polr3aB2RXC6 1390 aa10.49□□□□□ -0.73
Usp40-204ENSMUST00000187758 Mug2P28666 1451 aa10.49□□□□□ -0.73
Usp40-204ENSMUST00000187758 Sall3Q62255 1320 aa10.49□□□□□ -0.73
Usp40-204ENSMUST00000187758 Tmem131lQ3U3D7 1597 aa10.49□□□□□ -0.73
Usp40-204ENSMUST00000187758 Mbd5B1AYB6 1498 aa10.49□□□□□ -0.73
Usp40-204ENSMUST00000187758 Cpsf1Q9EPU4 1441 aaKnown RBP10.48□□□□□ -0.73
Usp40-204ENSMUST00000187758 Abcc6Q9R1S7 1498 aa10.48□□□□□ -0.73
Usp40-204ENSMUST00000187758 Iqgap3F8VQ29 1632 aa10.48□□□□□ -0.73
Usp40-204ENSMUST00000187758 Safb2Q80YR5 991 aaKnown RBP10.48□□□□□ -0.73
Usp40-204ENSMUST00000187758 CenpbP27790 599 aa10.47□□□□□ -0.73
Usp40-204ENSMUST00000187758 Qser1A2BIE1 1698 aa10.46□□□□□ -0.73
Usp40-204ENSMUST00000187758 Cwc22Q8C5N3 908 aaKnown RBP10.46□□□□□ -0.73
Usp40-204ENSMUST00000187758 Cdk13Q69ZA1 1511 aaKnown RBP10.46□□□□□ -0.73
Usp40-204ENSMUST00000187758 Kdm2aP59997 1161 aa10.46□□□□□ -0.73
Usp40-204ENSMUST00000187758 Pcdh10E9PXQ7 1057 aa10.46□□□□□ -0.74
Usp40-204ENSMUST00000187758 Mapk8ip2Q9ERE9 830 aa10.45□□□□□ -0.74
Usp40-204ENSMUST00000187758 Iqgap1Q9JKF1 1657 aaKnown RBP10.45□□□□□ -0.74
Usp40-204ENSMUST00000187758 Dnajc5gQ8C632 165 aa10.45□□□□□ -0.74
Usp40-204ENSMUST00000187758 Adamts7Q68SA9 1657 aa10.44□□□□□ -0.74
Usp40-204ENSMUST00000187758 Hfm1D3Z4R1 1434 aa10.44□□□□□ -0.74
Usp40-204ENSMUST00000187758 Akap12Q9WTQ5 1684 aa10.44□□□□□ -0.74
Usp40-204ENSMUST00000187758 RalgapbQ8BQZ4 1484 aa10.43□□□□□ -0.74
Usp40-204ENSMUST00000187758 Tulp4Q9JIL5 1547 aa10.43□□□□□ -0.74
Usp40-204ENSMUST00000187758 Knl1Q66JQ7 1612 aa10.43□□□□□ -0.74
Usp40-204ENSMUST00000187758 Gm20521D3Z5F7 333 aa10.43□□□□□ -0.74
Usp40-204ENSMUST00000187758 Srpk2O54781 681 aaKnown RBP10.43□□□□□ -0.74
Usp40-204ENSMUST00000187758 Efcab6Q6P1E8 1516 aa10.43□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms