RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Trpm2Q91YD4 1506 aa13.02□□□□□ -0.32
Trim40-203ENSMUST00000172711 Xrn1P97789 1719 aaKnown RBP13.02□□□□□ -0.33
Trim40-203ENSMUST00000172711 Fhod3Q76LL6 1578 aa13.02□□□□□ -0.33
Trim40-203ENSMUST00000172711 Caskin1Q6P9K8 1431 aa13.01□□□□□ -0.33
Trim40-203ENSMUST00000172711 Gli2Q0VGT2 1544 aa13.01□□□□□ -0.33
Trim40-203ENSMUST00000172711 Naip6Q9JIB6 1403 aa13□□□□□ -0.33
Trim40-203ENSMUST00000172711 Nos1Q9Z0J4 1429 aa12.99□□□□□ -0.33
Trim40-203ENSMUST00000172711 1700123L14RikQ3V2K7 440 aa12.99□□□□□ -0.33
Trim40-203ENSMUST00000172711 Knl1Q66JQ7 1612 aa12.99□□□□□ -0.33
Trim40-203ENSMUST00000172711 Ncoa1P70365 1447 aa12.99□□□□□ -0.33
Trim40-203ENSMUST00000172711 Ccnb3Q810T2 1396 aa12.96□□□□□ -0.33
Trim40-203ENSMUST00000172711 Lmtk2Q3TYD6 1471 aa12.96□□□□□ -0.34
Trim40-203ENSMUST00000172711 Phlpp1Q8CHE4 1687 aa12.96□□□□□ -0.34
Trim40-203ENSMUST00000172711 Bcl9Q9D219 1425 aa12.96□□□□□ -0.34
Trim40-203ENSMUST00000172711 Gli3Q61602 1583 aa12.94□□□□□ -0.34
Trim40-203ENSMUST00000172711 Arhgap23Q69ZH9 1483 aa12.92□□□□□ -0.34
Trim40-203ENSMUST00000172711 GapdhsQ64467 440 aa12.92□□□□□ -0.34
Trim40-203ENSMUST00000172711 Rimbp3Q3V0F0 1606 aa12.92□□□□□ -0.34
Trim40-203ENSMUST00000172711 Znf518aB2RRF6 1478 aaKnown RBP12.91□□□□□ -0.34
Trim40-203ENSMUST00000172711 Kdm3bQ6ZPY7 1562 aa12.91□□□□□ -0.34
Trim40-203ENSMUST00000172711 Med14A2ABV5 1459 aaKnown RBP12.91□□□□□ -0.34
Trim40-203ENSMUST00000172711 Hspa1lP16627 641 aa12.9□□□□□ -0.34
Trim40-203ENSMUST00000172711 Naip5Q9R016 1403 aa12.89□□□□□ -0.35
Trim40-203ENSMUST00000172711 AlkP97793 1621 aa12.88□□□□□ -0.35
Trim40-203ENSMUST00000172711 Uggt2E9Q4X2 1504 aa12.88□□□□□ -0.35
Trim40-203ENSMUST00000172711 Fmn2Q9JL04 1578 aa12.88□□□□□ -0.35
Trim40-203ENSMUST00000172711 Topbp1Q6ZQF0 1515 aa12.87□□□□□ -0.35
Trim40-203ENSMUST00000172711 Kif3bQ61771 747 aa12.87□□□□□ -0.35
Trim40-203ENSMUST00000172711 Rimbp2Q80U40 1072 aa12.86□□□□□ -0.35
Trim40-203ENSMUST00000172711 Scaf11E9PZM7 1456 aaKnown RBP12.86□□□□□ -0.35
Trim40-203ENSMUST00000172711 Rrp7aQ9D1C9 280 aaKnown RBP12.85□□□□□ -0.35
Trim40-203ENSMUST00000172711 Abca17E9PX95 1733 aa12.85□□□□□ -0.35
Trim40-203ENSMUST00000172711 Mast1Q9R1L5 1570 aa12.84□□□□□ -0.35
Trim40-203ENSMUST00000172711 Iqsec2Q5DU25 1478 aa12.83□□□□□ -0.36
Trim40-203ENSMUST00000172711 Rims2Q9EQZ7 1530 aa12.83□□□□□ -0.36
Trim40-203ENSMUST00000172711 Gm13697A2AK42 830 aa12.81□□□□□ -0.36
Trim40-203ENSMUST00000172711 Abcc6Q9R1S7 1498 aa12.81□□□□□ -0.36
Trim40-203ENSMUST00000172711 Plch2A2AP18 1501 aa12.81□□□□□ -0.36
Trim40-203ENSMUST00000172711 Adgrb2Q8CGM1 1561 aa12.81□□□□□ -0.36
Trim40-203ENSMUST00000172711 Cdk11bP24788 784 aaKnown RBP12.8□□□□□ -0.36
Trim40-203ENSMUST00000172711 GphnQ8BUV3 769 aaKnown RBP12.8□□□□□ -0.36
Trim40-203ENSMUST00000172711 Tubgcp6G5E8P0 1769 aa12.79□□□□□ -0.36
Trim40-203ENSMUST00000172711 Usp54Q8BL06 1588 aaKnown RBP12.79□□□□□ -0.36
Trim40-203ENSMUST00000172711 Prdm16A2A935 1275 aa12.78□□□□□ -0.36
Trim40-203ENSMUST00000172711 Rapgef3Q8VCC8 918 aa12.78□□□□□ -0.36
Trim40-203ENSMUST00000172711 Chd2E9PZM4 1827 aaKnown RBP12.78□□□□□ -0.36
Trim40-203ENSMUST00000172711 Gemin5Q8BX17 1502 aaKnown RBP12.78□□□□□ -0.36
Trim40-203ENSMUST00000172711 Abcc5Q9R1X5 1436 aa12.78□□□□□ -0.36
Trim40-203ENSMUST00000172711 DroshaQ5HZJ0 1373 aaKnown RBP12.77□□□□□ -0.37
Trim40-203ENSMUST00000172711 Myo5cE9Q1F5 1742 aa12.77□□□□□ -0.37
Trim40-203ENSMUST00000172711 Zc3h13E9Q784 1729 aaKnown RBP12.77□□□□□ -0.37
Trim40-203ENSMUST00000172711 Zbtb7cQ8VCZ7 619 aa12.77□□□□□ -0.37
Trim40-203ENSMUST00000172711 Prex1Q69ZK0 1650 aa12.77□□□□□ -0.37
Trim40-203ENSMUST00000172711 Hfm1D3Z4R1 1434 aa12.75□□□□□ -0.37
Trim40-203ENSMUST00000172711 PzpQ61838 1495 aa12.75□□□□□ -0.37
Trim40-203ENSMUST00000172711 Robo2Q7TPD3 1470 aa12.75□□□□□ -0.37
Trim40-203ENSMUST00000172711 ShprhQ7TPQ3 1674 aa12.74□□□□□ -0.37
Trim40-203ENSMUST00000172711 Iqgap1Q9JKF1 1657 aaKnown RBP12.74□□□□□ -0.37
Trim40-203ENSMUST00000172711 Mtus2Q3UHD3 1353 aa12.73□□□□□ -0.37
Trim40-203ENSMUST00000172711 Asxl1P59598 1514 aa12.73□□□□□ -0.37
Trim40-203ENSMUST00000172711 Spag9Q58A65 1321 aaKnown RBP12.73□□□□□ -0.37
Trim40-203ENSMUST00000172711 Bcl11bQ99PV8 884 aa12.72□□□□□ -0.37
Trim40-203ENSMUST00000172711 Ssh2Q5SW75 1423 aa12.72□□□□□ -0.37
Trim40-203ENSMUST00000172711 Adamts7Q68SA9 1657 aa12.71□□□□□ -0.37
Trim40-203ENSMUST00000172711 Plekhh2Q8C115 1491 aa12.71□□□□□ -0.38
Trim40-203ENSMUST00000172711 Nlrp6Q91WS2 869 aa12.7□□□□□ -0.38
Trim40-203ENSMUST00000172711 Nrxn3Q6P9K9 1571 aa12.7□□□□□ -0.38
Trim40-203ENSMUST00000172711 Cabp1Q9JLK7 227 aa12.69□□□□□ -0.38
Trim40-203ENSMUST00000172711 Akap12Q9WTQ5 1684 aa12.69□□□□□ -0.38
Trim40-203ENSMUST00000172711 Vps8Q0P5W1 1427 aa12.69□□□□□ -0.38
Trim40-203ENSMUST00000172711 Adgrl2Q8JZZ7 1487 aa12.68□□□□□ -0.38
Trim40-203ENSMUST00000172711 Kif13aQ9EQW7 1749 aa12.68□□□□□ -0.38
Trim40-203ENSMUST00000172711 Adgrb3Q80ZF8 1522 aa12.68□□□□□ -0.38
Trim40-203ENSMUST00000172711 3425401B19RikD3Z1D3 1412 aa12.68□□□□□ -0.38
Trim40-203ENSMUST00000172711 AcrbpQ3V140 540 aa12.67□□□□□ -0.38
Trim40-203ENSMUST00000172711 Arid4bA2CG63 1314 aaKnown RBP12.67□□□□□ -0.38
Trim40-203ENSMUST00000172711 Kif1bQ60575 1816 aaKnown RBP12.67□□□□□ -0.38
Trim40-203ENSMUST00000172711 Amigo3Q8C2S7 508 aa12.66□□□□□ -0.38
Trim40-203ENSMUST00000172711 Itsn1Q9Z0R4 1714 aa12.64□□□□□ -0.39
Trim40-203ENSMUST00000172711 Chic2Q9D9G3 165 aa12.64□□□□□ -0.39
Trim40-203ENSMUST00000172711 Kdm5aQ3UXZ9 1690 aa12.63□□□□□ -0.39
Trim40-203ENSMUST00000172711 Med1Q925J9 1575 aa12.63□□□□□ -0.39
Trim40-203ENSMUST00000172711 Hnrnpul2Q00PI9 745 aaKnown RBP12.62□□□□□ -0.39
Trim40-203ENSMUST00000172711 Eif2ak4Q9QZ05 1648 aa12.61□□□□□ -0.39
Trim40-203ENSMUST00000172711 Setd1aE9PYH6 1716 aa12.61□□□□□ -0.39
Trim40-203ENSMUST00000172711 Tmem131lQ3U3D7 1597 aa12.61□□□□□ -0.39
Trim40-203ENSMUST00000172711 Kif7B7ZNG0 1348 aa12.61□□□□□ -0.39
Trim40-203ENSMUST00000172711 Prdm2A2A7B5 1709 aaKnown RBP12.61□□□□□ -0.39
Trim40-203ENSMUST00000172711 Pde4cQ3UEI1 686 aa12.6□□□□□ -0.39
Trim40-203ENSMUST00000172711 Il16O54824 1322 aa12.59□□□□□ -0.39
Trim40-203ENSMUST00000172711 Thsd7aQ69ZU6 1645 aa12.59□□□□□ -0.39
Trim40-203ENSMUST00000172711 Cdca7Q9D0M2 382 aa12.58□□□□□ -0.4
Trim40-203ENSMUST00000172711 Fhad1A6PWD2 1420 aa12.58□□□□□ -0.4
Trim40-203ENSMUST00000172711 DnmbpQ6TXD4 1580 aa12.58□□□□□ -0.4
Trim40-203ENSMUST00000172711 Lamc1P02468 1607 aaKnown RBP12.57□□□□□ -0.4
Trim40-203ENSMUST00000172711 IghaA0A0A6YXW6 389 aa12.56□□□□□ -0.4
Trim40-203ENSMUST00000172711 Myo3aQ8K3H5 1613 aa12.55□□□□□ -0.4
Trim40-203ENSMUST00000172711 Cdk13Q69ZA1 1511 aaKnown RBP12.55□□□□□ -0.4
Trim40-203ENSMUST00000172711 Skint5A7XUY5 1461 aa12.55□□□□□ -0.4
Trim40-203ENSMUST00000172711 Col18a1P39061 1774 aa12.54□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 484.6 ms