RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 HmmrQ00547 794 aaKnown RBP11.47□□□□□ -0.57
Col6a5-201ENSMUST00000165165 Nap1l3Q794H2 544 aa11.47□□□□□ -0.57
Col6a5-201ENSMUST00000165165 A0A1L1SQF0 893 aa11.47□□□□□ -0.57
Col6a5-201ENSMUST00000165165 Hook1Q8BIL5 728 aa11.46□□□□□ -0.57
Col6a5-201ENSMUST00000165165 Spag9Q58A65 1321 aaKnown RBP11.46□□□□□ -0.57
Col6a5-201ENSMUST00000165165 Sh3bgrQ9WUZ7 214 aa11.46□□□□□ -0.58
Col6a5-201ENSMUST00000165165 Ggt6Q6PDE7 497 aa11.45□□□□□ -0.58
Col6a5-201ENSMUST00000165165 Dixdc1Q80Y83 711 aa11.45□□□□□ -0.58
Col6a5-201ENSMUST00000165165 St18Q80TY4 1045 aa11.45□□□□□ -0.58
Col6a5-201ENSMUST00000165165 Znf526Q8BI66 675 aa11.45□□□□□ -0.58
Col6a5-201ENSMUST00000165165 Ubl4bQ9CQ84 188 aa11.45□□□□□ -0.58
Col6a5-201ENSMUST00000165165 Nap1l1P28656 391 aaKnown RBP11.44□□□□□ -0.58
Col6a5-201ENSMUST00000165165 Sycp1Q62209 993 aa11.44□□□□□ -0.58
Col6a5-201ENSMUST00000165165 Filip1lQ6P6L0 1131 aa11.44□□□□□ -0.58
Col6a5-201ENSMUST00000165165 Baz1aO88379 1555 aa11.44□□□□□ -0.58
Col6a5-201ENSMUST00000165165 Ccar1Q8CH18 1146 aaKnown RBP11.43□□□□□ -0.58
Col6a5-201ENSMUST00000165165 Setd5Q5XJV7 1441 aa11.43□□□□□ -0.58
Col6a5-201ENSMUST00000165165 Polr3gQ6NXY9 223 aa11.43□□□□□ -0.58
Col6a5-201ENSMUST00000165165 Srek1Q8BZX4 494 aaKnown RBP11.43□□□□□ -0.58
Col6a5-201ENSMUST00000165165 Glipr1l2Q9CQ35 332 aa11.42□□□□□ -0.58
Col6a5-201ENSMUST00000165165 Ylpm1Q9R0I7 1386 aaKnown RBP11.41□□□□□ -0.58
Col6a5-201ENSMUST00000165165 March6Q6ZQ89 909 aa11.41□□□□□ -0.58
Col6a5-201ENSMUST00000165165 Fam13bQ8K2H3 851 aa11.41□□□□□ -0.58
Col6a5-201ENSMUST00000165165 Rrp7aQ9D1C9 280 aaKnown RBP11.41□□□□□ -0.58
Col6a5-201ENSMUST00000165165 Gps2Q921N8 327 aa11.4□□□□□ -0.58
Col6a5-201ENSMUST00000165165 Casq1O09165 405 aa11.4□□□□□ -0.58
Col6a5-201ENSMUST00000165165 ChgaP26339 463 aaKnown RBP11.4□□□□□ -0.58
Col6a5-201ENSMUST00000165165 Tmf1B9EKI3 1091 aa11.39□□□□□ -0.59
Col6a5-201ENSMUST00000165165 Rec8Q8C5S7 591 aa11.39□□□□□ -0.59
Col6a5-201ENSMUST00000165165 Senp3Q9EP97 568 aaKnown RBP11.39□□□□□ -0.59
Col6a5-201ENSMUST00000165165 Kif3cO35066 796 aa11.39□□□□□ -0.59
Col6a5-201ENSMUST00000165165 AcrbpQ3V140 540 aa11.39□□□□□ -0.59
Col6a5-201ENSMUST00000165165 Evc2Q8K1G2 1220 aa11.39□□□□□ -0.59
Col6a5-201ENSMUST00000165165 Mtus2Q3UHD3 1353 aa11.38□□□□□ -0.59
Col6a5-201ENSMUST00000165165 Golga2Q921M4 999 aa11.38□□□□□ -0.59
Col6a5-201ENSMUST00000165165 Kif4P33174 1231 aa11.38□□□□□ -0.59
Col6a5-201ENSMUST00000165165 Ddx11Q6AXC6 880 aa11.37□□□□□ -0.59
Col6a5-201ENSMUST00000165165 Def6Q8C2K1 630 aa11.37□□□□□ -0.59
Col6a5-201ENSMUST00000165165 Mns1Q61884 491 aa11.37□□□□□ -0.59
Col6a5-201ENSMUST00000165165 Slc4a10Q5DTL9 1118 aa11.36□□□□□ -0.59
Col6a5-201ENSMUST00000165165 Hmgn5Q9JL35 406 aa11.36□□□□□ -0.59
Col6a5-201ENSMUST00000165165 Wdr78E9PYY5 807 aa11.36□□□□□ -0.59
Col6a5-201ENSMUST00000165165 Gripap1Q8VD04 806 aa11.36□□□□□ -0.59
Col6a5-201ENSMUST00000165165 U2af1Q9D883 239 aaKnown RBP11.36□□□□□ -0.59
Col6a5-201ENSMUST00000165165 Bicd2Q921C5 820 aa11.36□□□□□ -0.59
Col6a5-201ENSMUST00000165165 Mrvi1Q9WUX5 899 aaKnown RBP11.35□□□□□ -0.59
Col6a5-201ENSMUST00000165165 Necab1Q8BG18 352 aa11.35□□□□□ -0.59
Col6a5-201ENSMUST00000165165 Cplx1P63040 134 aa11.35□□□□□ -0.59
Col6a5-201ENSMUST00000165165 Fnbp4Q6ZQ03 1031 aa11.34□□□□□ -0.59
Col6a5-201ENSMUST00000165165 Birc3O08863 600 aa11.33□□□□□ -0.59
Col6a5-201ENSMUST00000165165 Cplx2P84086 134 aa11.33□□□□□ -0.59
Col6a5-201ENSMUST00000165165 Ripply1Q2WG77 201 aa11.33□□□□□ -0.59
Col6a5-201ENSMUST00000165165 Stk26Q99JT2 416 aa11.33□□□□□ -0.6
Col6a5-201ENSMUST00000165165 NacadQ5SWP3 1504 aa11.33□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Gpatch3Q8BIY1 525 aa11.32□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Trim55G3X8Y1 545 aa11.32□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Ksr2Q3UVC0 959 aa11.32□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Golga3P55937 1487 aa11.32□□□□□ -0.6
Col6a5-201ENSMUST00000165165 AppP12023 770 aa11.32□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Arhgap27A2AB59 869 aa11.32□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Ccar2Q8VDP4 922 aaKnown RBP11.32□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Znf704Q9ERQ3 566 aa11.32□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Pdcl3Q8BVF2 240 aa11.32□□□□□ -0.6
Col6a5-201ENSMUST00000165165 KinQ8K339 391 aa11.32□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Erlin2Q8BFZ9 340 aa11.32□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Ppm1fQ8CGA0 452 aa11.31□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Mre11Q61216 706 aa11.31□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Ppp4r3bQ922R5 820 aa11.31□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Ak7Q9D2H2 614 aa11.31□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Gbp4Q61107 620 aa11.31□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Pibf1E9Q6K3 756 aa11.31□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Commd10Q8JZY2 202 aa11.31□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Hnrnpul1Q8VDM6 859 aaKnown RBP11.31□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Ccdc146E9Q9F7 977 aa11.31□□□□□ -0.6
Col6a5-201ENSMUST00000165165 EzrP26040 586 aaKnown RBP11.3□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Ccp110Q7TSH4 1004 aa11.3□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Cgnl1Q6AW69 1298 aa11.3□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Dhx16G3X8X0 1044 aaKnown RBP11.3□□□□□ -0.6
Col6a5-201ENSMUST00000165165 FosbP13346 338 aa11.3□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Spata24Q6P926 205 aa11.3□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Rundc1Q0VDN7 615 aa11.29□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Mia2Q91ZV0 1396 aa11.29□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Zscan21Q07231 555 aa11.29□□□□□ -0.6
Col6a5-201ENSMUST00000165165 NaspQ99MD9 773 aaKnown RBP11.28□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Tceal9Q9DD24 104 aa11.28□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Cep112Q5PR68 954 aa11.28□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Plagl1Q9JLQ4 704 aa11.28□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Eea1Q8BL66 1411 aa11.28□□□□□ -0.6
Col6a5-201ENSMUST00000165165 HdgfP51859 237 aaKnown RBP11.28□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Sox12Q04890 314 aa11.28□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Rfx1P48377 963 aa11.28□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Kcnj4P52189 445 aa11.28□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Eif2s2Q99L45 331 aaKnown RBP11.27□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Gtf2e1Q9D0D5 440 aa11.27□□□□□ -0.6
Col6a5-201ENSMUST00000165165 Map3k7clP58500 142 aa11.27□□□□□ -0.61
Col6a5-201ENSMUST00000165165 Cdkn1cP49919 348 aa11.27□□□□□ -0.61
Col6a5-201ENSMUST00000165165 CrbnQ8C7D2 445 aa11.27□□□□□ -0.61
Col6a5-201ENSMUST00000165165 Smc2Q8CG48 1191 aaKnown RBP11.27□□□□□ -0.61
Col6a5-201ENSMUST00000165165 Kif7B7ZNG0 1348 aa11.26□□□□□ -0.61
Col6a5-201ENSMUST00000165165 Kif3aP28741 701 aa11.26□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 42.8 ms