RNA–Protein interactions for RNA: ENSMUST00000161241.7

Usf1-208, Transcript of Upstream stimulatory factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usf1, Length 2,167 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1-208ENSMUST00000161241 Shroom2A2ALU4 1481 aa18.11■□□□□ 0.49
Usf1-208ENSMUST00000161241 Zmym4A2A791 1549 aaKnown RBP18.11■□□□□ 0.49
Usf1-208ENSMUST00000161241 Nup155Q99P88 1391 aaKnown RBP18.11■□□□□ 0.49
Usf1-208ENSMUST00000161241 Kcnh8P59111 1102 aa18.1■□□□□ 0.49
Usf1-208ENSMUST00000161241 Mlh3A0A1Y7VMP7 1443 aa18.1■□□□□ 0.49
Usf1-208ENSMUST00000161241 Nup160Q9Z0W3 1402 aaKnown RBP18.1■□□□□ 0.49
Usf1-208ENSMUST00000161241 Tubgcp6G5E8P0 1769 aa18.09■□□□□ 0.49
Usf1-208ENSMUST00000161241 PrkcshO08795 521 aa18.09■□□□□ 0.49
Usf1-208ENSMUST00000161241 Anp32bQ9EST5 272 aaKnown RBP18.09■□□□□ 0.49
Usf1-208ENSMUST00000161241 TnikP83510 1323 aa18.09■□□□□ 0.49
Usf1-208ENSMUST00000161241 Erbb3Q61526 1339 aa18.08■□□□□ 0.49
Usf1-208ENSMUST00000161241 Fam163aQ8CAA5 168 aa18.08■□□□□ 0.48
Usf1-208ENSMUST00000161241 Prkrip1Q9CWV6 186 aaKnown RBP18.08■□□□□ 0.48
Usf1-208ENSMUST00000161241 Rusc2Q80U22 1514 aa18.08■□□□□ 0.48
Usf1-208ENSMUST00000161241 Magi1Q6RHR9 1471 aa18.07■□□□□ 0.48
Usf1-208ENSMUST00000161241 Caskin1Q6P9K8 1431 aa18.07■□□□□ 0.48
Usf1-208ENSMUST00000161241 Rock1P70335 1354 aa18.07■□□□□ 0.48
Usf1-208ENSMUST00000161241 Arhgap27A2AB59 869 aa18.06■□□□□ 0.48
Usf1-208ENSMUST00000161241 Abcc2Q8VI47 1543 aa18.06■□□□□ 0.48
Usf1-208ENSMUST00000161241 Zscan21Q07231 555 aa18.06■□□□□ 0.48
Usf1-208ENSMUST00000161241 Fmn2Q9JL04 1578 aa18.05■□□□□ 0.48
Usf1-208ENSMUST00000161241 Dot1lQ6XZL8 1540 aa18.05■□□□□ 0.48
Usf1-208ENSMUST00000161241 Mak16Q8BGS0 296 aaKnown RBP18.05■□□□□ 0.48
Usf1-208ENSMUST00000161241 NeflP08551 543 aa18.04■□□□□ 0.48
Usf1-208ENSMUST00000161241 Arhgap31A6X8Z5 1425 aa18.04■□□□□ 0.48
Usf1-208ENSMUST00000161241 Zfp444Q3TDV8 331 aaKnown RBP18.03■□□□□ 0.48
Usf1-208ENSMUST00000161241 Rpgrip1lQ8CG73 1264 aa18.03■□□□□ 0.48
Usf1-208ENSMUST00000161241 Kdm5cP41230 1554 aa18.03■□□□□ 0.48
Usf1-208ENSMUST00000161241 Hsp90aa1P07901 733 aaKnown RBP18.03■□□□□ 0.48
Usf1-208ENSMUST00000161241 Grwd1Q810D6 446 aaKnown RBP18.03■□□□□ 0.48
Usf1-208ENSMUST00000161241 PtprgQ05909 1442 aa18.01■□□□□ 0.47
Usf1-208ENSMUST00000161241 Ttbk1Q6PCN3 1308 aa18.01■□□□□ 0.47
Usf1-208ENSMUST00000161241 Mroh2aD3Z750 1679 aa18■□□□□ 0.47
Usf1-208ENSMUST00000161241 Map4P27546 1125 aaKnown RBP18■□□□□ 0.47
Usf1-208ENSMUST00000161241 Prex2Q3LAC4 1598 aa17.99■□□□□ 0.47
Usf1-208ENSMUST00000161241 Adgrl2Q8JZZ7 1487 aa17.99■□□□□ 0.47
Usf1-208ENSMUST00000161241 Tdrd9Q14BI7 1383 aa17.99■□□□□ 0.47
Usf1-208ENSMUST00000161241 Pabpn1Q8CCS6 302 aaKnown RBP17.98■□□□□ 0.47
Usf1-208ENSMUST00000161241 Mbd3Q9Z2D8 285 aaKnown RBP17.97■□□□□ 0.47
Usf1-208ENSMUST00000161241 Arid4bA2CG63 1314 aaKnown RBP17.97■□□□□ 0.47
Usf1-208ENSMUST00000161241 Iqcf3Q9D498 203 aa17.96■□□□□ 0.47
Usf1-208ENSMUST00000161241 Hdac5Q9Z2V6 1113 aa17.96■□□□□ 0.46
Usf1-208ENSMUST00000161241 Ttc41Q692V3 1318 aa17.95■□□□□ 0.46
Usf1-208ENSMUST00000161241 Lrrc9Q8CDN9 1456 aa17.95■□□□□ 0.46
Usf1-208ENSMUST00000161241 Tarbp1E9Q368 1579 aa17.93■□□□□ 0.46
Usf1-208ENSMUST00000161241 Clstn2Q9ER65 966 aa17.93■□□□□ 0.46
Usf1-208ENSMUST00000161241 Plch2A2AP18 1501 aa17.93■□□□□ 0.46
Usf1-208ENSMUST00000161241 Rrbp1Q99PL5 1605 aaKnown RBP17.91■□□□□ 0.46
Usf1-208ENSMUST00000161241 Ak9G3UYQ4 1894 aa17.9■□□□□ 0.46
Usf1-208ENSMUST00000161241 Q7TT23 1179 aa17.9■□□□□ 0.46
Usf1-208ENSMUST00000161241 Ppip5k1A2ARP1 1436 aa17.9■□□□□ 0.46
Usf1-208ENSMUST00000161241 Tex14Q7M6U3 1450 aa17.89■□□□□ 0.45
Usf1-208ENSMUST00000161241 Clasp1Q80TV8 1535 aaKnown RBP17.88■□□□□ 0.45
Usf1-208ENSMUST00000161241 Col17a1Q07563 1470 aa17.88■□□□□ 0.45
Usf1-208ENSMUST00000161241 Mast1Q9R1L5 1570 aa17.88■□□□□ 0.45
Usf1-208ENSMUST00000161241 Ttll13A4Q9F6 804 aa17.88■□□□□ 0.45
Usf1-208ENSMUST00000161241 Zcchc11B2RX14 1644 aaKnown RBP17.87■□□□□ 0.45
Usf1-208ENSMUST00000161241 Fam208aQ69ZR9 1610 aaKnown RBP17.87■□□□□ 0.45
Usf1-208ENSMUST00000161241 Zmym3Q9JLM4 1370 aa17.87■□□□□ 0.45
Usf1-208ENSMUST00000161241 Neurl4Q5NCX5 1563 aa17.87■□□□□ 0.45
Usf1-208ENSMUST00000161241 Ssh2Q5SW75 1423 aa17.86■□□□□ 0.45
Usf1-208ENSMUST00000161241 PrxO55103 1391 aa17.86■□□□□ 0.45
Usf1-208ENSMUST00000161241 ChgaP26339 463 aaKnown RBP17.84■□□□□ 0.45
Usf1-208ENSMUST00000161241 Pank3Q8R2W9 370 aa17.84■□□□□ 0.45
Usf1-208ENSMUST00000161241 Atp7aQ64430 1491 aa17.84■□□□□ 0.45
Usf1-208ENSMUST00000161241 Cd109Q8R422 1442 aa17.83■□□□□ 0.45
Usf1-208ENSMUST00000161241 Irx3P81067 507 aa17.83■□□□□ 0.45
Usf1-208ENSMUST00000161241 Gtf3c3Q3TMP1 882 aa17.83■□□□□ 0.44
Usf1-208ENSMUST00000161241 Rad21Q61550 635 aaKnown RBP17.83■□□□□ 0.44
Usf1-208ENSMUST00000161241 Sbno1Q689Z5 1390 aa17.82■□□□□ 0.44
Usf1-208ENSMUST00000161241 Fancd2Q80V62 1450 aa17.81■□□□□ 0.44
Usf1-208ENSMUST00000161241 Nkx1-2P42580 305 aa17.81■□□□□ 0.44
Usf1-208ENSMUST00000161241 Kdm2bQ6P1G2 1309 aa17.81■□□□□ 0.44
Usf1-208ENSMUST00000161241 Zscan10Q3URR7 782 aa17.8■□□□□ 0.44
Usf1-208ENSMUST00000161241 Kif16bB1AVY7 1312 aa17.8■□□□□ 0.44
Usf1-208ENSMUST00000161241 Tmf1B9EKI3 1091 aa17.79■□□□□ 0.44
Usf1-208ENSMUST00000161241 Inpp5dQ9ES52 1191 aa17.79■□□□□ 0.44
Usf1-208ENSMUST00000161241 Gm32742A0A1B0GT42 1604 aa17.79■□□□□ 0.44
Usf1-208ENSMUST00000161241 Adamts13Q769J6 1426 aa17.78■□□□□ 0.44
Usf1-208ENSMUST00000161241 Dnmt1P13864 1620 aaKnown RBP17.78■□□□□ 0.44
Usf1-208ENSMUST00000161241 Atf7ipQ7TT18 1306 aa17.77■□□□□ 0.44
Usf1-208ENSMUST00000161241 EspnQ9ET47 871 aa17.77■□□□□ 0.44
Usf1-208ENSMUST00000161241 Pdcd11Q6NS46 1862 aaKnown RBP17.77■□□□□ 0.44
Usf1-208ENSMUST00000161241 Gm14025A2AP89 1413 aa17.76■□□□□ 0.43
Usf1-208ENSMUST00000161241 Rnf17Q99MV7 1640 aa17.76■□□□□ 0.43
Usf1-208ENSMUST00000161241 Rwdd1Q9CQK7 243 aa17.76■□□□□ 0.43
Usf1-208ENSMUST00000161241 Plekhh1Q80TI1 1356 aa17.76■□□□□ 0.43
Usf1-208ENSMUST00000161241 Trappc8E9PWG2 1437 aa17.75■□□□□ 0.43
Usf1-208ENSMUST00000161241 Rrp7aQ9D1C9 280 aaKnown RBP17.75■□□□□ 0.43
Usf1-208ENSMUST00000161241 Hecw1Q8K4P8 1604 aa17.74■□□□□ 0.43
Usf1-208ENSMUST00000161241 CanxP35564 591 aaKnown RBP17.74■□□□□ 0.43
Usf1-208ENSMUST00000161241 Ifit1bl1D3Z6F0 470 aa17.74■□□□□ 0.43
Usf1-208ENSMUST00000161241 Esx1O88933 382 aa17.74■□□□□ 0.43
Usf1-208ENSMUST00000161241 Cfap74Q3UY96 1578 aa17.74■□□□□ 0.43
Usf1-208ENSMUST00000161241 Gm16486A0A1D5RMD1 1434 aa17.73■□□□□ 0.43
Usf1-208ENSMUST00000161241 Arhgap5P97393 1501 aa17.72■□□□□ 0.43
Usf1-208ENSMUST00000161241 Mre11Q61216 706 aa17.72■□□□□ 0.43
Usf1-208ENSMUST00000161241 Jph4Q80WT0 628 aa17.72■□□□□ 0.43
Usf1-208ENSMUST00000161241 Rab3gap2Q8BMG7 1366 aa17.72■□□□□ 0.43
Usf1-208ENSMUST00000161241 Cep170Q6A065 1588 aa17.72■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 33.3 ms