RNA–Protein interactions for RNA: ENSMUST00000156290.8

Ttc28-206, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Ttc28, Length 10,688 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-206ENSMUST00000156290 U2af1Q9D883 239 aaKnown RBP11.53□□□□□ -0.56
Ttc28-206ENSMUST00000156290 Gtf3c5Q8R2T8 520 aa11.52□□□□□ -0.56
Ttc28-206ENSMUST00000156290 Nup155Q99P88 1391 aaKnown RBP11.52□□□□□ -0.56
Ttc28-206ENSMUST00000156290 Spryd3E9Q9B3 442 aa11.52□□□□□ -0.57
Ttc28-206ENSMUST00000156290 Smarca2Q6DIC0 1577 aa11.52□□□□□ -0.57
Ttc28-206ENSMUST00000156290 Fan1Q69ZT1 1020 aa11.52□□□□□ -0.57
Ttc28-206ENSMUST00000156290 Tpm3P21107 285 aaKnown RBP11.51□□□□□ -0.57
Ttc28-206ENSMUST00000156290 Phldb1Q6PDH0 1371 aaKnown RBP11.51□□□□□ -0.57
Ttc28-206ENSMUST00000156290 Nolc1E9Q5C9 702 aaKnown RBP11.51□□□□□ -0.57
Ttc28-206ENSMUST00000156290 Tmco5bQ80X59 307 aa11.51□□□□□ -0.57
Ttc28-206ENSMUST00000156290 Plcd4Q8K3R3 807 aa11.5□□□□□ -0.57
Ttc28-206ENSMUST00000156290 Iqcf3Q9D498 203 aa11.5□□□□□ -0.57
Ttc28-206ENSMUST00000156290 EzrP26040 586 aaKnown RBP11.5□□□□□ -0.57
Ttc28-206ENSMUST00000156290 Zscan21Q07231 555 aa11.5□□□□□ -0.57
Ttc28-206ENSMUST00000156290 Zrsr2Q62377 462 aaKnown RBP11.5□□□□□ -0.57
Ttc28-206ENSMUST00000156290 Cttnbp2B9EJA2 1648 aa11.5□□□□□ -0.57
Ttc28-206ENSMUST00000156290 Hsp90b1P08113 802 aaKnown RBP11.5□□□□□ -0.57
Ttc28-206ENSMUST00000156290 Ccnb3Q810T2 1396 aa11.49□□□□□ -0.57
Ttc28-206ENSMUST00000156290 Anp32eP97822 260 aaKnown RBP11.49□□□□□ -0.57
Ttc28-206ENSMUST00000156290 R3hcc1Q8BSI6 488 aa11.48□□□□□ -0.57
Ttc28-206ENSMUST00000156290 Rtf1A2AQ19 715 aaKnown RBP11.48□□□□□ -0.57
Ttc28-206ENSMUST00000156290 Ccdc34Q3UI66 367 aa11.47□□□□□ -0.57
Ttc28-206ENSMUST00000156290 UacaQ8CGB3 1411 aa11.47□□□□□ -0.57
Ttc28-206ENSMUST00000156290 Ralbp1Q62172 648 aa11.47□□□□□ -0.57
Ttc28-206ENSMUST00000156290 Mrvi1Q9WUX5 899 aaKnown RBP11.47□□□□□ -0.57
Ttc28-206ENSMUST00000156290 Cluap1Q8R3P7 413 aa11.47□□□□□ -0.57
Ttc28-206ENSMUST00000156290 Cux1P53564 1515 aa11.46□□□□□ -0.57
Ttc28-206ENSMUST00000156290 CrbnQ8C7D2 445 aa11.46□□□□□ -0.57
Ttc28-206ENSMUST00000156290 Kif16bB1AVY7 1312 aa11.46□□□□□ -0.57
Ttc28-206ENSMUST00000156290 Dhx29Q6PGC1 1365 aaKnown RBP11.46□□□□□ -0.58
Ttc28-206ENSMUST00000156290 Slc4a1apE9PX68 744 aa11.46□□□□□ -0.58
Ttc28-206ENSMUST00000156290 Cgnl1Q6AW69 1298 aa11.46□□□□□ -0.58
Ttc28-206ENSMUST00000156290 Utp14aQ640M1 767 aaKnown RBP11.45□□□□□ -0.58
Ttc28-206ENSMUST00000156290 Dhx8A2A4P0 1244 aaKnown RBP11.45□□□□□ -0.58
Ttc28-206ENSMUST00000156290 Tmf1B9EKI3 1091 aa11.45□□□□□ -0.58
Ttc28-206ENSMUST00000156290 Pes1Q9EQ61 584 aaKnown RBP11.45□□□□□ -0.58
Ttc28-206ENSMUST00000156290 Pabpn1Q8CCS6 302 aaKnown RBP11.45□□□□□ -0.58
Ttc28-206ENSMUST00000156290 SlkO54988 1233 aa11.44□□□□□ -0.58
Ttc28-206ENSMUST00000156290 Pip4k2bQ80XI4 416 aa11.44□□□□□ -0.58
Ttc28-206ENSMUST00000156290 WrnO09053 1401 aa11.43□□□□□ -0.58
Ttc28-206ENSMUST00000156290 Rassf8Q8CJ96 419 aa11.43□□□□□ -0.58
Ttc28-206ENSMUST00000156290 Hmgn5Q9JL35 406 aa11.42□□□□□ -0.58
Ttc28-206ENSMUST00000156290 Carmil1Q6EDY6 1374 aa11.42□□□□□ -0.58
Ttc28-206ENSMUST00000156290 Q3TQI7 289 aaKnown RBP11.42□□□□□ -0.58
Ttc28-206ENSMUST00000156290 Pak3Q61036 559 aa11.42□□□□□ -0.58
Ttc28-206ENSMUST00000156290 Mink1Q9JM52 1308 aa11.42□□□□□ -0.58
Ttc28-206ENSMUST00000156290 Prkrip1Q9CWV6 186 aaKnown RBP11.42□□□□□ -0.58
Ttc28-206ENSMUST00000156290 Sh3bp5Q9Z131 463 aa11.42□□□□□ -0.58
Ttc28-206ENSMUST00000156290 LrpprcQ6PB66 1392 aaKnown RBP11.42□□□□□ -0.58
Ttc28-206ENSMUST00000156290 Atad2bE9Q166 1460 aaKnown RBP11.42□□□□□ -0.58
Ttc28-206ENSMUST00000156290 Sart3Q9JLI8 962 aaKnown RBP11.42□□□□□ -0.58
Ttc28-206ENSMUST00000156290 Srcin1Q9QWI6 1250 aa11.42□□□□□ -0.58
Ttc28-206ENSMUST00000156290 Tpm3-rs7D3Z2H9 248 aa11.41□□□□□ -0.58
Ttc28-206ENSMUST00000156290 ScribQ80U72 1612 aa11.41□□□□□ -0.58
Ttc28-206ENSMUST00000156290 Shq1Q7TMX5 569 aa11.41□□□□□ -0.58
Ttc28-206ENSMUST00000156290 St18Q80TY4 1045 aa11.41□□□□□ -0.58
Ttc28-206ENSMUST00000156290 Plekhh2Q8C115 1491 aa11.41□□□□□ -0.58
Ttc28-206ENSMUST00000156290 Rabep1O35551 862 aa11.4□□□□□ -0.59
Ttc28-206ENSMUST00000156290 Polr1aO35134 1717 aaKnown RBP11.4□□□□□ -0.59
Ttc28-206ENSMUST00000156290 Trap1aP19473 224 aa11.39□□□□□ -0.59
Ttc28-206ENSMUST00000156290 Smarca4Q3TKT4 1613 aaKnown RBP11.39□□□□□ -0.59
Ttc28-206ENSMUST00000156290 Fez1Q8K0X8 392 aa11.39□□□□□ -0.59
Ttc28-206ENSMUST00000156290 Bcl11bQ99PV8 884 aa11.39□□□□□ -0.59
Ttc28-206ENSMUST00000156290 Golga2Q921M4 999 aa11.39□□□□□ -0.59
Ttc28-206ENSMUST00000156290 Gprasp1Q5U4C1 1347 aa11.38□□□□□ -0.59
Ttc28-206ENSMUST00000156290 Shroom4Q1W617 1475 aa11.38□□□□□ -0.59
Ttc28-206ENSMUST00000156290 ScaperF8VQ70 1398 aaKnown RBP11.38□□□□□ -0.59
Ttc28-206ENSMUST00000156290 Tdrd9Q14BI7 1383 aa11.38□□□□□ -0.59
Ttc28-206ENSMUST00000156290 Gripap1Q8VD04 806 aa11.37□□□□□ -0.59
Ttc28-206ENSMUST00000156290 Ppm1eQ80TL0 749 aa11.37□□□□□ -0.59
Ttc28-206ENSMUST00000156290 ChgaP26339 463 aaKnown RBP11.37□□□□□ -0.59
Ttc28-206ENSMUST00000156290 Pank3Q8R2W9 370 aa11.37□□□□□ -0.59
Ttc28-206ENSMUST00000156290 Washc2Q6PGL7 1334 aa11.37□□□□□ -0.59
Ttc28-206ENSMUST00000156290 DmtnQ9WV69 405 aa11.37□□□□□ -0.59
Ttc28-206ENSMUST00000156290 Cabp4Q8VHC5 271 aa11.36□□□□□ -0.59
Ttc28-206ENSMUST00000156290 Soga1E1U8D0 1418 aa11.36□□□□□ -0.59
Ttc28-206ENSMUST00000156290 Pdcl2Q78Y63 240 aa11.36□□□□□ -0.59
Ttc28-206ENSMUST00000156290 Inpp5dQ9ES52 1191 aa11.36□□□□□ -0.59
Ttc28-206ENSMUST00000156290 Rock1P70335 1354 aa11.35□□□□□ -0.59
Ttc28-206ENSMUST00000156290 Kif4P33174 1231 aa11.35□□□□□ -0.59
Ttc28-206ENSMUST00000156290 Ksr2Q3UVC0 959 aa11.35□□□□□ -0.59
Ttc28-206ENSMUST00000156290 Ppm1fQ8CGA0 452 aa11.35□□□□□ -0.59
Ttc28-206ENSMUST00000156290 Znf710Q3U288 666 aa11.35□□□□□ -0.59
Ttc28-206ENSMUST00000156290 Rad54l2Q99NG0 1466 aa11.34□□□□□ -0.59
Ttc28-206ENSMUST00000156290 Atl3Q91YH5 541 aa11.34□□□□□ -0.59
Ttc28-206ENSMUST00000156290 Chaf1aQ9QWF0 911 aa11.34□□□□□ -0.59
Ttc28-206ENSMUST00000156290 Fez2Q6TYB5 348 aa11.34□□□□□ -0.59
Ttc28-206ENSMUST00000156290 Kif7B7ZNG0 1348 aa11.34□□□□□ -0.59
Ttc28-206ENSMUST00000156290 Efcab5A0JP43 1406 aa11.34□□□□□ -0.59
Ttc28-206ENSMUST00000156290 Dhx57Q6P5D3 1388 aaKnown RBP11.34□□□□□ -0.59
Ttc28-206ENSMUST00000156290 Ciz1Q8VEH2 845 aa11.33□□□□□ -0.59
Ttc28-206ENSMUST00000156290 NaspQ99MD9 773 aaKnown RBP11.33□□□□□ -0.59
Ttc28-206ENSMUST00000156290 Chmp3Q9CQ10 224 aa11.33□□□□□ -0.6
Ttc28-206ENSMUST00000156290 Cc2d2bA0A286YDU8 1405 aa11.33□□□□□ -0.6
Ttc28-206ENSMUST00000156290 Pcmtd1P59913 357 aa11.33□□□□□ -0.6
Ttc28-206ENSMUST00000156290 Zfp644E9QA22 1323 aa11.33□□□□□ -0.6
Ttc28-206ENSMUST00000156290 Plekhh1Q80TI1 1356 aa11.33□□□□□ -0.6
Ttc28-206ENSMUST00000156290 Cdkn1cP49919 348 aa11.33□□□□□ -0.6
Ttc28-206ENSMUST00000156290 Dusp27Q148W8 1138 aa11.33□□□□□ -0.6
Ttc28-206ENSMUST00000156290 Usp40Q8BWR4 1235 aa11.33□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 56.7 ms