RNA–Protein interactions for RNA: ENSMUST00000151403.8

Tro-205, Transcript of Tro protein, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Tro, Length 2,715 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tro-205ENSMUST00000151403 Cpsf1Q9EPU4 1441 aaKnown RBP11.69□□□□□ -0.54
Tro-205ENSMUST00000151403 Arhgap5P97393 1501 aa11.69□□□□□ -0.54
Tro-205ENSMUST00000151403 Chd1P40201 1711 aa11.69□□□□□ -0.54
Tro-205ENSMUST00000151403 Abcc3B2RX12 1523 aa11.68□□□□□ -0.54
Tro-205ENSMUST00000151403 Slc4a2P13808 1237 aaKnown RBP11.68□□□□□ -0.54
Tro-205ENSMUST00000151403 Asxl1P59598 1514 aa11.68□□□□□ -0.54
Tro-205ENSMUST00000151403 Ssh2Q5SW75 1423 aa11.68□□□□□ -0.54
Tro-205ENSMUST00000151403 Dapk1Q80YE7 1442 aa11.68□□□□□ -0.54
Tro-205ENSMUST00000151403 Gm13695A2AK44 830 aa11.68□□□□□ -0.54
Tro-205ENSMUST00000151403 Rock1P70335 1354 aa11.68□□□□□ -0.54
Tro-205ENSMUST00000151403 Trak1Q6PD31 939 aa11.67□□□□□ -0.54
Tro-205ENSMUST00000151403 CatipB9EKE5 520 aa11.67□□□□□ -0.54
Tro-205ENSMUST00000151403 Plekhg5Q66T02 1073 aa11.67□□□□□ -0.54
Tro-205ENSMUST00000151403 RalgapbQ8BQZ4 1484 aa11.67□□□□□ -0.54
Tro-205ENSMUST00000151403 Abca8bQ8K440 1620 aa11.67□□□□□ -0.54
Tro-205ENSMUST00000151403 Cwc22Q8C5N3 908 aaKnown RBP11.66□□□□□ -0.54
Tro-205ENSMUST00000151403 Myom3A2ABU4 1439 aa11.66□□□□□ -0.54
Tro-205ENSMUST00000151403 Abcc1O35379 1528 aa11.65□□□□□ -0.54
Tro-205ENSMUST00000151403 Trappc8E9PWG2 1437 aa11.65□□□□□ -0.54
Tro-205ENSMUST00000151403 Map4P27546 1125 aaKnown RBP11.65□□□□□ -0.55
Tro-205ENSMUST00000151403 Wwc2Q6NXJ0 1187 aa11.65□□□□□ -0.55
Tro-205ENSMUST00000151403 Ifnlr1Q8CGK5 535 aa11.65□□□□□ -0.55
Tro-205ENSMUST00000151403 Exoc6Q8R313 802 aa11.65□□□□□ -0.55
Tro-205ENSMUST00000151403 Cdk13Q69ZA1 1511 aaKnown RBP11.64□□□□□ -0.55
Tro-205ENSMUST00000151403 Polr3aB2RXC6 1390 aa11.64□□□□□ -0.55
Tro-205ENSMUST00000151403 NrdcQ8BHG1 1161 aa11.63□□□□□ -0.55
Tro-205ENSMUST00000151403 Cdc42bpbQ7TT50 1713 aa11.63□□□□□ -0.55
Tro-205ENSMUST00000151403 Robo2Q7TPD3 1470 aa11.63□□□□□ -0.55
Tro-205ENSMUST00000151403 Rgl3Q3UYI5 709 aa11.63□□□□□ -0.55
Tro-205ENSMUST00000151403 P3h3Q8CG70 732 aa11.63□□□□□ -0.55
Tro-205ENSMUST00000151403 Ppip5k1A2ARP1 1436 aa11.63□□□□□ -0.55
Tro-205ENSMUST00000151403 Clstn2Q9ER65 966 aa11.62□□□□□ -0.55
Tro-205ENSMUST00000151403 Fkbp15Q6P9Q6 1216 aaKnown RBP11.61□□□□□ -0.55
Tro-205ENSMUST00000151403 Rock2P70336 1388 aa11.61□□□□□ -0.55
Tro-205ENSMUST00000151403 Liat1Q810M6 228 aa11.6□□□□□ -0.55
Tro-205ENSMUST00000151403 Gapvd1Q6PAR5 1458 aa11.6□□□□□ -0.55
Tro-205ENSMUST00000151403 Setd1aE9PYH6 1716 aa11.6□□□□□ -0.55
Tro-205ENSMUST00000151403 PnisrA2AJT4 805 aaKnown RBP11.6□□□□□ -0.55
Tro-205ENSMUST00000151403 Pak3Q61036 559 aa11.6□□□□□ -0.55
Tro-205ENSMUST00000151403 Abca17E9PX95 1733 aa11.6□□□□□ -0.55
Tro-205ENSMUST00000151403 Rundc1Q0VDN7 615 aa11.59□□□□□ -0.55
Tro-205ENSMUST00000151403 Atp7aQ64430 1491 aa11.59□□□□□ -0.55
Tro-205ENSMUST00000151403 Atp10dQ8K2X1 1416 aa11.58□□□□□ -0.56
Tro-205ENSMUST00000151403 Cd109Q8R422 1442 aa11.58□□□□□ -0.56
Tro-205ENSMUST00000151403 AI481877A2ALV5 1481 aa11.58□□□□□ -0.56
Tro-205ENSMUST00000151403 Kidins220E9Q9B7 1793 aa11.58□□□□□ -0.56
Tro-205ENSMUST00000151403 Prdm16A2A935 1275 aa11.58□□□□□ -0.56
Tro-205ENSMUST00000151403 Sart1Q9Z315 806 aaKnown RBP11.58□□□□□ -0.56
Tro-205ENSMUST00000151403 Tarbp1E9Q368 1579 aa11.58□□□□□ -0.56
Tro-205ENSMUST00000151403 Cep170Q6A065 1588 aa11.57□□□□□ -0.56
Tro-205ENSMUST00000151403 Card11Q8CIS0 1159 aa11.57□□□□□ -0.56
Tro-205ENSMUST00000151403 Tubgcp6G5E8P0 1769 aa11.57□□□□□ -0.56
Tro-205ENSMUST00000151403 Rrp7aQ9D1C9 280 aaKnown RBP11.57□□□□□ -0.56
Tro-205ENSMUST00000151403 Egfem1Q8C088 590 aa11.55□□□□□ -0.56
Tro-205ENSMUST00000151403 ShprhQ7TPQ3 1674 aa11.55□□□□□ -0.56
Tro-205ENSMUST00000151403 Adamts13Q769J6 1426 aa11.54□□□□□ -0.56
Tro-205ENSMUST00000151403 Xrn1P97789 1719 aaKnown RBP11.54□□□□□ -0.56
Tro-205ENSMUST00000151403 Igf1rQ60751 1373 aa11.54□□□□□ -0.56
Tro-205ENSMUST00000151403 Usp54Q8BL06 1588 aaKnown RBP11.53□□□□□ -0.56
Tro-205ENSMUST00000151403 Kif1bQ60575 1816 aaKnown RBP11.53□□□□□ -0.56
Tro-205ENSMUST00000151403 Kdm5cP41230 1554 aa11.53□□□□□ -0.56
Tro-205ENSMUST00000151403 Ofd1Q80Z25 1017 aa11.52□□□□□ -0.57
Tro-205ENSMUST00000151403 Spag9Q58A65 1321 aaKnown RBP11.52□□□□□ -0.57
Tro-205ENSMUST00000151403 Zfyve16Q80U44 1528 aa11.51□□□□□ -0.57
Tro-205ENSMUST00000151403 Pknox2Q8BG99 474 aa11.51□□□□□ -0.57
Tro-205ENSMUST00000151403 Dnajc5P60904 198 aa11.51□□□□□ -0.57
Tro-205ENSMUST00000151403 Grwd1Q810D6 446 aaKnown RBP11.51□□□□□ -0.57
Tro-205ENSMUST00000151403 Edc4Q3UJB9 1406 aaKnown RBP11.5□□□□□ -0.57
Tro-205ENSMUST00000151403 Znf608Q56A10 1511 aa11.5□□□□□ -0.57
Tro-205ENSMUST00000151403 Slc4a3P16283 1227 aa11.5□□□□□ -0.57
Tro-205ENSMUST00000151403 Nsd2Q8BVE8 1365 aa11.49□□□□□ -0.57
Tro-205ENSMUST00000151403 L3mbtl2P59178 703 aa11.49□□□□□ -0.57
Tro-205ENSMUST00000151403 Abca9Q8K449 1623 aa11.49□□□□□ -0.57
Tro-205ENSMUST00000151403 Myo5cE9Q1F5 1742 aa11.49□□□□□ -0.57
Tro-205ENSMUST00000151403 Pde4cQ3UEI1 686 aa11.48□□□□□ -0.57
Tro-205ENSMUST00000151403 Uggt2E9Q4X2 1504 aa11.48□□□□□ -0.57
Tro-205ENSMUST00000151403 Zmym4A2A791 1549 aaKnown RBP11.47□□□□□ -0.57
Tro-205ENSMUST00000151403 Tulp4Q9JIL5 1547 aa11.47□□□□□ -0.57
Tro-205ENSMUST00000151403 Tmem131lQ3U3D7 1597 aa11.47□□□□□ -0.57
Tro-205ENSMUST00000151403 Hdac5Q9Z2V6 1113 aa11.47□□□□□ -0.57
Tro-205ENSMUST00000151403 Nos1Q9Z0J4 1429 aa11.47□□□□□ -0.57
Tro-205ENSMUST00000151403 Kcnh8P59111 1102 aa11.46□□□□□ -0.58
Tro-205ENSMUST00000151403 Tcerg1Q8CGF7 1100 aaKnown RBP11.46□□□□□ -0.58
Tro-205ENSMUST00000151403 Map3k5O35099 1380 aa11.46□□□□□ -0.58
Tro-205ENSMUST00000151403 Ythdc2B2RR83 1445 aaKnown RBP11.46□□□□□ -0.58
Tro-205ENSMUST00000151403 Fndc1E9Q043 1732 aa11.45□□□□□ -0.58
Tro-205ENSMUST00000151403 Ccdc27Q3V036 639 aa11.45□□□□□ -0.58
Tro-205ENSMUST00000151403 Ipo9Q91YE6 1041 aa11.45□□□□□ -0.58
Tro-205ENSMUST00000151403 AnkarA2RT91 1465 aa11.45□□□□□ -0.58
Tro-205ENSMUST00000151403 Pola1P33609 1465 aa11.44□□□□□ -0.58
Tro-205ENSMUST00000151403 Ylpm1Q9R0I7 1386 aaKnown RBP11.44□□□□□ -0.58
Tro-205ENSMUST00000151403 PtprtQ99M80 1454 aa11.43□□□□□ -0.58
Tro-205ENSMUST00000151403 Abcc6Q9R1S7 1498 aa11.43□□□□□ -0.58
Tro-205ENSMUST00000151403 Znf518aB2RRF6 1478 aaKnown RBP11.42□□□□□ -0.58
Tro-205ENSMUST00000151403 Sbno1Q689Z5 1390 aa11.42□□□□□ -0.58
Tro-205ENSMUST00000151403 Topbp1Q6ZQF0 1515 aa11.41□□□□□ -0.58
Tro-205ENSMUST00000151403 Upf2A2AT37 1269 aaKnown RBP11.41□□□□□ -0.58
Tro-205ENSMUST00000151403 Plch2A2AP18 1501 aa11.41□□□□□ -0.58
Tro-205ENSMUST00000151403 Kank1E9Q238 1360 aa11.41□□□□□ -0.58
Tro-205ENSMUST00000151403 Zbtb7cQ8VCZ7 619 aa11.4□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 169.9 ms