RNA–Protein interactions for RNA: ENSMUST00000124488.6

Trdmt1-202, Transcript of tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trdmt1, Length 3,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1-202ENSMUST00000124488 Mrs2Q5NCE8 434 aa10.39□□□□□ -0.75
Trdmt1-202ENSMUST00000124488 Sall3Q62255 1320 aa10.38□□□□□ -0.75
Trdmt1-202ENSMUST00000124488 Washc2Q6PGL7 1334 aa10.38□□□□□ -0.75
Trdmt1-202ENSMUST00000124488 Abca8bQ8K440 1620 aa10.38□□□□□ -0.75
Trdmt1-202ENSMUST00000124488 Atp7aQ64430 1491 aa10.38□□□□□ -0.75
Trdmt1-202ENSMUST00000124488 Setbp1Q9Z180 1582 aa10.38□□□□□ -0.75
Trdmt1-202ENSMUST00000124488 NrdcQ8BHG1 1161 aa10.37□□□□□ -0.75
Trdmt1-202ENSMUST00000124488 Cwc22Q8C5N3 908 aaKnown RBP10.37□□□□□ -0.75
Trdmt1-202ENSMUST00000124488 Stra8P70278 393 aa10.37□□□□□ -0.75
Trdmt1-202ENSMUST00000124488 Prdm10Q3UTQ7 1184 aa10.37□□□□□ -0.75
Trdmt1-202ENSMUST00000124488 Kif14L0N7N1 1674 aaKnown RBP10.36□□□□□ -0.75
Trdmt1-202ENSMUST00000124488 Myom3A2ABU4 1439 aa10.36□□□□□ -0.75
Trdmt1-202ENSMUST00000124488 Atp1b4Q99ME6 356 aa10.36□□□□□ -0.75
Trdmt1-202ENSMUST00000124488 Lamc1P02468 1607 aaKnown RBP10.35□□□□□ -0.75
Trdmt1-202ENSMUST00000124488 Cdc42bpbQ7TT50 1713 aa10.35□□□□□ -0.75
Trdmt1-202ENSMUST00000124488 Gm20521D3Z5F7 333 aa10.35□□□□□ -0.75
Trdmt1-202ENSMUST00000124488 Eif5bQ05D44 1216 aaKnown RBP10.34□□□□□ -0.75
Trdmt1-202ENSMUST00000124488 PtprgQ05909 1442 aa10.34□□□□□ -0.75
Trdmt1-202ENSMUST00000124488 Csrnp3P59055 597 aa10.34□□□□□ -0.75
Trdmt1-202ENSMUST00000124488 Abcc3B2RX12 1523 aa10.34□□□□□ -0.75
Trdmt1-202ENSMUST00000124488 Asxl1P59598 1514 aa10.34□□□□□ -0.75
Trdmt1-202ENSMUST00000124488 Camsap2Q8C1B1 1461 aa10.34□□□□□ -0.75
Trdmt1-202ENSMUST00000124488 Trpm2Q91YD4 1506 aa10.34□□□□□ -0.75
Trdmt1-202ENSMUST00000124488 Hdac5Q9Z2V6 1113 aa10.33□□□□□ -0.76
Trdmt1-202ENSMUST00000124488 Smg6P61406 1418 aaKnown RBP10.33□□□□□ -0.76
Trdmt1-202ENSMUST00000124488 Nsd2Q8BVE8 1365 aa10.33□□□□□ -0.76
Trdmt1-202ENSMUST00000124488 Exoc6Q8R313 802 aa10.33□□□□□ -0.76
Trdmt1-202ENSMUST00000124488 Kiaa1210E9Q0C6 1637 aa10.32□□□□□ -0.76
Trdmt1-202ENSMUST00000124488 Zfyve16Q80U44 1528 aa10.32□□□□□ -0.76
Trdmt1-202ENSMUST00000124488 OvosQ3UU35 1456 aa10.32□□□□□ -0.76
Trdmt1-202ENSMUST00000124488 Cdk13Q69ZA1 1511 aaKnown RBP10.32□□□□□ -0.76
Trdmt1-202ENSMUST00000124488 Mug2P28666 1451 aa10.32□□□□□ -0.76
Trdmt1-202ENSMUST00000124488 Kidins220E9Q9B7 1793 aa10.31□□□□□ -0.76
Trdmt1-202ENSMUST00000124488 Srpk2O54781 681 aaKnown RBP10.31□□□□□ -0.76
Trdmt1-202ENSMUST00000124488 Ptch1Q61115 1434 aa10.31□□□□□ -0.76
Trdmt1-202ENSMUST00000124488 Ttc21bQ0HA38 1315 aa10.31□□□□□ -0.76
Trdmt1-202ENSMUST00000124488 Fan1Q69ZT1 1020 aa10.3□□□□□ -0.76
Trdmt1-202ENSMUST00000124488 Usp54Q8BL06 1588 aaKnown RBP10.3□□□□□ -0.76
Trdmt1-202ENSMUST00000124488 Ncoa1P70365 1447 aa10.3□□□□□ -0.76
Trdmt1-202ENSMUST00000124488 Adgrl3Q80TS3 1537 aa10.3□□□□□ -0.76
Trdmt1-202ENSMUST00000124488 Gm38655A0A286YDK6 273 aa10.29□□□□□ -0.76
Trdmt1-202ENSMUST00000124488 Pdcd11Q6NS46 1862 aaKnown RBP10.29□□□□□ -0.76
Trdmt1-202ENSMUST00000124488 Mast1Q9R1L5 1570 aa10.29□□□□□ -0.76
Trdmt1-202ENSMUST00000124488 Myt1Q8CFC2 1127 aa10.29□□□□□ -0.76
Trdmt1-202ENSMUST00000124488 Rock2P70336 1388 aa10.28□□□□□ -0.76
Trdmt1-202ENSMUST00000124488 Ak9G3UYQ4 1894 aa10.28□□□□□ -0.76
Trdmt1-202ENSMUST00000124488 Depdc5P61460 1591 aa10.28□□□□□ -0.76
Trdmt1-202ENSMUST00000124488 ErbinQ80TH2 1402 aa10.28□□□□□ -0.76
Trdmt1-202ENSMUST00000124488 Tarbp1E9Q368 1579 aa10.27□□□□□ -0.76
Trdmt1-202ENSMUST00000124488 P3h3Q8CG70 732 aa10.27□□□□□ -0.76
Trdmt1-202ENSMUST00000124488 Kif21bQ9QXL1 1668 aa10.27□□□□□ -0.76
Trdmt1-202ENSMUST00000124488 Kif1bQ60575 1816 aaKnown RBP10.27□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Srcin1Q9QWI6 1250 aa10.27□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Dot1lQ6XZL8 1540 aa10.27□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Polr3aB2RXC6 1390 aa10.27□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Rock1P70335 1354 aa10.26□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Abca9Q8K449 1623 aa10.26□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Hecw1Q8K4P8 1604 aa10.26□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 DroshaQ5HZJ0 1373 aaKnown RBP10.25□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Edc4Q3UJB9 1406 aaKnown RBP10.25□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Ylpm1Q9R0I7 1386 aaKnown RBP10.25□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Gm13695A2AK44 830 aa10.25□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Cnga1P29974 684 aa10.25□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Afap1Q80YS6 731 aa10.25□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Anp32bQ9EST5 272 aaKnown RBP10.25□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Pprc1Q6NZN1 1644 aa10.24□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Gtf2e1Q9D0D5 440 aa10.24□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Nos1Q9Z0J4 1429 aa10.24□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Pank3Q8R2W9 370 aa10.23□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Stk26Q99JT2 416 aa10.23□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Usp40Q8BWR4 1235 aa10.23□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Bcl11aQ9QYE3 773 aa10.23□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Znf518aB2RRF6 1478 aaKnown RBP10.23□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Slc4a1apE9PX68 744 aa10.23□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Inpp5dQ9ES52 1191 aa10.23□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 ShprhQ7TPQ3 1674 aa10.22□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Plekhg5Q66T02 1073 aa10.22□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Gli2Q0VGT2 1544 aa10.22□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Stag3O70576 1240 aa10.22□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Slc4a2P13808 1237 aaKnown RBP10.22□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Mbd5B1AYB6 1498 aa10.22□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 RalgapbQ8BQZ4 1484 aa10.22□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Xrn1P97789 1719 aaKnown RBP10.22□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Naip6Q9JIB6 1403 aa10.21□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Tnnt3Q9QZ47 272 aa10.21□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Neurl4Q5NCX5 1563 aa10.21□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Cpsf1Q9EPU4 1441 aaKnown RBP10.21□□□□□ -0.77
Trdmt1-202ENSMUST00000124488 Yeats2Q3TUF7 1407 aa10.21□□□□□ -0.78
Trdmt1-202ENSMUST00000124488 Safb2Q80YR5 991 aaKnown RBP10.2□□□□□ -0.78
Trdmt1-202ENSMUST00000124488 Cfap65Q3V0B4 1847 aa10.2□□□□□ -0.78
Trdmt1-202ENSMUST00000124488 Col17a1Q07563 1470 aa10.2□□□□□ -0.78
Trdmt1-202ENSMUST00000124488 CenpbP27790 599 aa10.2□□□□□ -0.78
Trdmt1-202ENSMUST00000124488 Abcc6Q9R1S7 1498 aa10.19□□□□□ -0.78
Trdmt1-202ENSMUST00000124488 Puf60Q3UEB3 564 aaKnown RBP10.18□□□□□ -0.78
Trdmt1-202ENSMUST00000124488 Znf710Q3U288 666 aa10.18□□□□□ -0.78
Trdmt1-202ENSMUST00000124488 Rad21Q61550 635 aaKnown RBP10.18□□□□□ -0.78
Trdmt1-202ENSMUST00000124488 IqubQ8CDK3 788 aa10.17□□□□□ -0.78
Trdmt1-202ENSMUST00000124488 Abca6Q8K441 1624 aa10.17□□□□□ -0.78
Trdmt1-202ENSMUST00000124488 Tmf1B9EKI3 1091 aa10.16□□□□□ -0.78
Trdmt1-202ENSMUST00000124488 SafbD3YXK2 937 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 121.1 ms