RNA–Protein interactions for RNA: ENSMUST00000112736.7

Vps4b-202, Transcript of Vacuolar protein sorting-associated protein 4B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps4b, Length 4,539 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4b-202ENSMUST00000112736 Psme1P97371 249 aa16.4■□□□□ 0.22
Vps4b-202ENSMUST00000112736 Tnnt1O88346 262 aa16.4■□□□□ 0.22
Vps4b-202ENSMUST00000112736 Tsen2Q6P7W5 460 aa16.39■□□□□ 0.21
Vps4b-202ENSMUST00000112736 Shq1Q7TMX5 569 aa16.38■□□□□ 0.21
Vps4b-202ENSMUST00000112736 EspnQ9ET47 871 aa16.38■□□□□ 0.21
Vps4b-202ENSMUST00000112736 Tiam1Q60610 1591 aa16.37■□□□□ 0.21
Vps4b-202ENSMUST00000112736 Plb1Q3TTY0 1478 aa16.36■□□□□ 0.21
Vps4b-202ENSMUST00000112736 NudcO35685 332 aaKnown RBP16.36■□□□□ 0.21
Vps4b-202ENSMUST00000112736 EprsQ8CGC7 1512 aaKnown RBP16.36■□□□□ 0.21
Vps4b-202ENSMUST00000112736 Map3k1P53349 1493 aa16.36■□□□□ 0.21
Vps4b-202ENSMUST00000112736 Pak3Q61036 559 aa16.34■□□□□ 0.21
Vps4b-202ENSMUST00000112736 Dnai1Q8C0M8 701 aa16.34■□□□□ 0.21
Vps4b-202ENSMUST00000112736 Rock1P70335 1354 aa16.33■□□□□ 0.21
Vps4b-202ENSMUST00000112736 GorabQ8BRM2 368 aa16.32■□□□□ 0.2
Vps4b-202ENSMUST00000112736 Camsap1A2AHC3 1581 aa16.32■□□□□ 0.2
Vps4b-202ENSMUST00000112736 Mfap1aC0HKD8 439 aaKnown RBP16.31■□□□□ 0.2
Vps4b-202ENSMUST00000112736 Mfap1bC0HKD9 439 aaKnown RBP16.31■□□□□ 0.2
Vps4b-202ENSMUST00000112736 Bcl11aQ9QYE3 773 aa16.31■□□□□ 0.2
Vps4b-202ENSMUST00000112736 Iqcf3Q9D498 203 aa16.31■□□□□ 0.2
Vps4b-202ENSMUST00000112736 Cux1P53564 1515 aa16.31■□□□□ 0.2
Vps4b-202ENSMUST00000112736 PnisrA2AJT4 805 aaKnown RBP16.31■□□□□ 0.2
Vps4b-202ENSMUST00000112736 Mbd3Q9Z2D8 285 aaKnown RBP16.3■□□□□ 0.2
Vps4b-202ENSMUST00000112736 Ipo9Q91YE6 1041 aa16.3■□□□□ 0.2
Vps4b-202ENSMUST00000112736 Wdr62Q3U3T8 1523 aa16.29■□□□□ 0.2
Vps4b-202ENSMUST00000112736 Zfp444Q3TDV8 331 aaKnown RBP16.28■□□□□ 0.2
Vps4b-202ENSMUST00000112736 GsdmaQ9EST1 446 aa16.27■□□□□ 0.2
Vps4b-202ENSMUST00000112736 Hsp90b1P08113 802 aaKnown RBP16.27■□□□□ 0.19
Vps4b-202ENSMUST00000112736 Puf60Q3UEB3 564 aaKnown RBP16.26■□□□□ 0.19
Vps4b-202ENSMUST00000112736 Ccdc60Q8C4J0 545 aa16.26■□□□□ 0.19
Vps4b-202ENSMUST00000112736 Map7O88735 730 aa16.26■□□□□ 0.19
Vps4b-202ENSMUST00000112736 A2mQ6GQT1 1474 aa16.26■□□□□ 0.19
Vps4b-202ENSMUST00000112736 Rtf1A2AQ19 715 aaKnown RBP16.26■□□□□ 0.19
Vps4b-202ENSMUST00000112736 Pabpn1Q8CCS6 302 aaKnown RBP16.26■□□□□ 0.19
Vps4b-202ENSMUST00000112736 Htatsf1Q8BGC0 757 aa16.26■□□□□ 0.19
Vps4b-202ENSMUST00000112736 Pank1Q8K4K6 548 aa16.26■□□□□ 0.19
Vps4b-202ENSMUST00000112736 Cd109Q8R422 1442 aa16.25■□□□□ 0.19
Vps4b-202ENSMUST00000112736 Ccdc30Q8BVF4 654 aa16.25■□□□□ 0.19
Vps4b-202ENSMUST00000112736 Q9D9H8 365 aa16.25■□□□□ 0.19
Vps4b-202ENSMUST00000112736 Sall3Q62255 1320 aa16.25■□□□□ 0.19
Vps4b-202ENSMUST00000112736 Naip2Q9QUK4 1447 aa16.25■□□□□ 0.19
Vps4b-202ENSMUST00000112736 Pcf11G3X9Z4 1553 aa16.25■□□□□ 0.19
Vps4b-202ENSMUST00000112736 Apaf1O88879 1249 aa16.24■□□□□ 0.19
Vps4b-202ENSMUST00000112736 Q3TQI7 289 aaKnown RBP16.24■□□□□ 0.19
Vps4b-202ENSMUST00000112736 CenpjQ569L8 1344 aa16.23■□□□□ 0.19
Vps4b-202ENSMUST00000112736 Ncoa2Q61026 1462 aa16.23■□□□□ 0.19
Vps4b-202ENSMUST00000112736 Cc2d1aQ8K1A6 943 aa16.23■□□□□ 0.19
Vps4b-202ENSMUST00000112736 Mrc2Q64449 1479 aa16.23■□□□□ 0.19
Vps4b-202ENSMUST00000112736 Ipo8Q7TMY7 1010 aa16.22■□□□□ 0.19
Vps4b-202ENSMUST00000112736 3425401B19RikD3Z1D3 1412 aa16.22■□□□□ 0.19
Vps4b-202ENSMUST00000112736 Nectin2P32507 530 aa16.22■□□□□ 0.19
Vps4b-202ENSMUST00000112736 Nutm1Q8BHP2 1126 aa16.22■□□□□ 0.19
Vps4b-202ENSMUST00000112736 Ccar1Q8CH18 1146 aaKnown RBP16.22■□□□□ 0.19
Vps4b-202ENSMUST00000112736 Trim44Q9QXA7 346 aa16.22■□□□□ 0.19
Vps4b-202ENSMUST00000112736 Polr1aO35134 1717 aaKnown RBP16.22■□□□□ 0.19
Vps4b-202ENSMUST00000112736 MlecQ6ZQI3 291 aaKnown RBP16.22■□□□□ 0.19
Vps4b-202ENSMUST00000112736 ErbinQ80TH2 1402 aa16.21■□□□□ 0.19
Vps4b-202ENSMUST00000112736 Abcc5Q9R1X5 1436 aa16.21■□□□□ 0.19
Vps4b-202ENSMUST00000112736 PtmaP26350 111 aa16.2■□□□□ 0.18
Vps4b-202ENSMUST00000112736 Ppp2r1aQ76MZ3 589 aa16.2■□□□□ 0.18
Vps4b-202ENSMUST00000112736 Fam163aQ8CAA5 168 aa16.2■□□□□ 0.18
Vps4b-202ENSMUST00000112736 KnstrnQ9D9Z1 312 aaKnown RBP16.2■□□□□ 0.18
Vps4b-202ENSMUST00000112736 Ccdc146E9Q9F7 977 aa16.19■□□□□ 0.18
Vps4b-202ENSMUST00000112736 Cabp4Q8VHC5 271 aa16.19■□□□□ 0.18
Vps4b-202ENSMUST00000112736 Lmod3E9QA62 571 aa16.18■□□□□ 0.18
Vps4b-202ENSMUST00000112736 Stard8Q8K031 1019 aa16.18■□□□□ 0.18
Vps4b-202ENSMUST00000112736 Eif2s2Q99L45 331 aaKnown RBP16.18■□□□□ 0.18
Vps4b-202ENSMUST00000112736 Mug1P28665 1476 aa16.17■□□□□ 0.18
Vps4b-202ENSMUST00000112736 L3mbtl2P59178 703 aa16.17■□□□□ 0.18
Vps4b-202ENSMUST00000112736 NexmifQ5DTT1 1515 aa16.17■□□□□ 0.18
Vps4b-202ENSMUST00000112736 Arhgap5P97393 1501 aa16.16■□□□□ 0.18
Vps4b-202ENSMUST00000112736 Myom3A2ABU4 1439 aa16.16■□□□□ 0.18
Vps4b-202ENSMUST00000112736 Lamc3Q9R0B6 1581 aa16.15■□□□□ 0.18
Vps4b-202ENSMUST00000112736 Sart3Q9JLI8 962 aaKnown RBP16.15■□□□□ 0.18
Vps4b-202ENSMUST00000112736 Atp2b2Q9R0K7 1198 aa16.15■□□□□ 0.18
Vps4b-202ENSMUST00000112736 Prdm16A2A935 1275 aa16.15■□□□□ 0.18
Vps4b-202ENSMUST00000112736 Kif16bB1AVY7 1312 aa16.14■□□□□ 0.17
Vps4b-202ENSMUST00000112736 Ttll13A4Q9F6 804 aa16.14■□□□□ 0.17
Vps4b-202ENSMUST00000112736 Slx4Q6P1D7 1565 aa16.14■□□□□ 0.17
Vps4b-202ENSMUST00000112736 Fgd6Q69ZL1 1399 aa16.14■□□□□ 0.17
Vps4b-202ENSMUST00000112736 Ak7Q9D2H2 614 aa16.13■□□□□ 0.17
Vps4b-202ENSMUST00000112736 G3bp1P97855 465 aaKnown RBP16.13■□□□□ 0.17
Vps4b-202ENSMUST00000112736 Ralbp1Q62172 648 aa16.12■□□□□ 0.17
Vps4b-202ENSMUST00000112736 Ccdc9Q8VC31 543 aaKnown RBP16.12■□□□□ 0.17
Vps4b-202ENSMUST00000112736 KarsQ99MN1 595 aaKnown RBP16.12■□□□□ 0.17
Vps4b-202ENSMUST00000112736 Chmp4bQ9D8B3 224 aaKnown RBP16.12■□□□□ 0.17
Vps4b-202ENSMUST00000112736 Nsd2Q8BVE8 1365 aa16.12■□□□□ 0.17
Vps4b-202ENSMUST00000112736 Il16O54824 1322 aa16.11■□□□□ 0.17
Vps4b-202ENSMUST00000112736 Plekhg5Q66T02 1073 aa16.1■□□□□ 0.17
Vps4b-202ENSMUST00000112736 Clstn1Q9EPL2 979 aa16.1■□□□□ 0.17
Vps4b-202ENSMUST00000112736 SynmQ70IV5 1561 aa16.1■□□□□ 0.17
Vps4b-202ENSMUST00000112736 Neo1P97798 1493 aa16.1■□□□□ 0.17
Vps4b-202ENSMUST00000112736 Afap1Q80YS6 731 aa16.09■□□□□ 0.17
Vps4b-202ENSMUST00000112736 Stk31Q99MW1 1018 aa16.09■□□□□ 0.17
Vps4b-202ENSMUST00000112736 Ankrd26Q811D2 1581 aa16.09■□□□□ 0.17
Vps4b-202ENSMUST00000112736 Grin2aP35436 1464 aa16.09■□□□□ 0.17
Vps4b-202ENSMUST00000112736 Washc2Q6PGL7 1334 aa16.09■□□□□ 0.17
Vps4b-202ENSMUST00000112736 Dnttip2Q8R2M2 758 aaKnown RBP16.09■□□□□ 0.17
Vps4b-202ENSMUST00000112736 HnrnpuQ8VEK3 800 aaKnown RBP16.09■□□□□ 0.17
Vps4b-202ENSMUST00000112736 Irx3P81067 507 aa16.08■□□□□ 0.17
Vps4b-202ENSMUST00000112736 PrxO55103 1391 aa16.08■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms