RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Zbtb7cQ8VCZ7 619 aa18.39■□□□□ 0.53
Trim50-202ENSMUST00000111180 Gli2Q0VGT2 1544 aa18.38■□□□□ 0.53
Trim50-202ENSMUST00000111180 NefmP08553 848 aa18.38■□□□□ 0.53
Trim50-202ENSMUST00000111180 Naip6Q9JIB6 1403 aa18.38■□□□□ 0.53
Trim50-202ENSMUST00000111180 Fhod3Q76LL6 1578 aa18.38■□□□□ 0.53
Trim50-202ENSMUST00000111180 Il16O54824 1322 aa18.37■□□□□ 0.53
Trim50-202ENSMUST00000111180 Kdm3bQ6ZPY7 1562 aa18.37■□□□□ 0.53
Trim50-202ENSMUST00000111180 Rsph4aQ8BYM7 716 aa18.37■□□□□ 0.53
Trim50-202ENSMUST00000111180 Fmn2Q9JL04 1578 aa18.37■□□□□ 0.53
Trim50-202ENSMUST00000111180 Mast1Q9R1L5 1570 aa18.35■□□□□ 0.53
Trim50-202ENSMUST00000111180 Xrn1P97789 1719 aaKnown RBP18.35■□□□□ 0.53
Trim50-202ENSMUST00000111180 Trpm2Q91YD4 1506 aa18.33■□□□□ 0.53
Trim50-202ENSMUST00000111180 CltcQ68FD5 1675 aaKnown RBP18.32■□□□□ 0.52
Trim50-202ENSMUST00000111180 Dip2aQ8BWT5 1523 aa18.32■□□□□ 0.52
Trim50-202ENSMUST00000111180 Znf518aB2RRF6 1478 aaKnown RBP18.31■□□□□ 0.52
Trim50-202ENSMUST00000111180 RictorQ6QI06 1708 aa18.3■□□□□ 0.52
Trim50-202ENSMUST00000111180 Chic2Q9D9G3 165 aa18.3■□□□□ 0.52
Trim50-202ENSMUST00000111180 Cabp1Q9JLK7 227 aa18.3■□□□□ 0.52
Trim50-202ENSMUST00000111180 Ccer2J3QPU5 274 aa18.29■□□□□ 0.52
Trim50-202ENSMUST00000111180 NclP09405 707 aaKnown RBP18.29■□□□□ 0.52
Trim50-202ENSMUST00000111180 Adgrl2Q8JZZ7 1487 aa18.28■□□□□ 0.52
Trim50-202ENSMUST00000111180 Spag9Q58A65 1321 aaKnown RBP18.27■□□□□ 0.52
Trim50-202ENSMUST00000111180 Ecm2Q5FW85 670 aa18.27■□□□□ 0.52
Trim50-202ENSMUST00000111180 Hnrnpul2Q00PI9 745 aaKnown RBP18.26■□□□□ 0.51
Trim50-202ENSMUST00000111180 GphnQ8BUV3 769 aaKnown RBP18.25■□□□□ 0.51
Trim50-202ENSMUST00000111180 Knl1Q66JQ7 1612 aa18.24■□□□□ 0.51
Trim50-202ENSMUST00000111180 Adgrb2Q8CGM1 1561 aa18.24■□□□□ 0.51
Trim50-202ENSMUST00000111180 Naip5Q9R016 1403 aa18.21■□□□□ 0.51
Trim50-202ENSMUST00000111180 Ankrd36D3Z4K0 1415 aa18.21■□□□□ 0.51
Trim50-202ENSMUST00000111180 Uggt2E9Q4X2 1504 aa18.2■□□□□ 0.5
Trim50-202ENSMUST00000111180 Bcl9Q9D219 1425 aa18.2■□□□□ 0.5
Trim50-202ENSMUST00000111180 Ltbp4Q8K4G1 1666 aa18.19■□□□□ 0.5
Trim50-202ENSMUST00000111180 Abca17E9PX95 1733 aa18.17■□□□□ 0.5
Trim50-202ENSMUST00000111180 Lamc1P02468 1607 aaKnown RBP18.17■□□□□ 0.5
Trim50-202ENSMUST00000111180 Plch2A2AP18 1501 aa18.17■□□□□ 0.5
Trim50-202ENSMUST00000111180 Topbp1Q6ZQF0 1515 aa18.17■□□□□ 0.5
Trim50-202ENSMUST00000111180 AlkP97793 1621 aa18.16■□□□□ 0.5
Trim50-202ENSMUST00000111180 Phlpp1Q8CHE4 1687 aa18.15■□□□□ 0.5
Trim50-202ENSMUST00000111180 Kif21bQ9QXL1 1668 aa18.15■□□□□ 0.5
Trim50-202ENSMUST00000111180 Ncoa1P70365 1447 aa18.14■□□□□ 0.49
Trim50-202ENSMUST00000111180 Ube2uB1AUC4 352 aa18.14■□□□□ 0.49
Trim50-202ENSMUST00000111180 Med14A2ABV5 1459 aaKnown RBP18.13■□□□□ 0.49
Trim50-202ENSMUST00000111180 Arhgap23Q69ZH9 1483 aa18.13■□□□□ 0.49
Trim50-202ENSMUST00000111180 Ssh2Q5SW75 1423 aa18.11■□□□□ 0.49
Trim50-202ENSMUST00000111180 Arid4bA2CG63 1314 aaKnown RBP18.1■□□□□ 0.49
Trim50-202ENSMUST00000111180 Rimbp3Q3V0F0 1606 aa18.1■□□□□ 0.49
Trim50-202ENSMUST00000111180 Pde4cQ3UEI1 686 aa18.09■□□□□ 0.49
Trim50-202ENSMUST00000111180 Hfm1D3Z4R1 1434 aa18.09■□□□□ 0.49
Trim50-202ENSMUST00000111180 Usp54Q8BL06 1588 aaKnown RBP18.07■□□□□ 0.48
Trim50-202ENSMUST00000111180 Abcc6Q9R1S7 1498 aa18.07■□□□□ 0.48
Trim50-202ENSMUST00000111180 Rapgef3Q8VCC8 918 aa18.07■□□□□ 0.48
Trim50-202ENSMUST00000111180 DroshaQ5HZJ0 1373 aaKnown RBP18.06■□□□□ 0.48
Trim50-202ENSMUST00000111180 Scaf11E9PZM7 1456 aaKnown RBP18.04■□□□□ 0.48
Trim50-202ENSMUST00000111180 Clstn2Q9ER65 966 aa18.04■□□□□ 0.48
Trim50-202ENSMUST00000111180 Myo5cE9Q1F5 1742 aa18.04■□□□□ 0.48
Trim50-202ENSMUST00000111180 Nup155Q99P88 1391 aaKnown RBP18.03■□□□□ 0.48
Trim50-202ENSMUST00000111180 Mphosph9A6H5Y1 991 aa18.02■□□□□ 0.48
Trim50-202ENSMUST00000111180 Gli3Q61602 1583 aa18.02■□□□□ 0.48
Trim50-202ENSMUST00000111180 Hspa1lP16627 641 aa18.01■□□□□ 0.47
Trim50-202ENSMUST00000111180 Prex1Q69ZK0 1650 aa18.01■□□□□ 0.47
Trim50-202ENSMUST00000111180 Zfp644E9QA22 1323 aa18.01■□□□□ 0.47
Trim50-202ENSMUST00000111180 TonslQ6NZL6 1363 aa18■□□□□ 0.47
Trim50-202ENSMUST00000111180 Rims2Q9EQZ7 1530 aa18■□□□□ 0.47
Trim50-202ENSMUST00000111180 Kif1bQ60575 1816 aaKnown RBP18■□□□□ 0.47
Trim50-202ENSMUST00000111180 ShprhQ7TPQ3 1674 aa17.99■□□□□ 0.47
Trim50-202ENSMUST00000111180 Eid3Q3V124 375 aa17.98■□□□□ 0.47
Trim50-202ENSMUST00000111180 Bcl11bQ99PV8 884 aa17.97■□□□□ 0.47
Trim50-202ENSMUST00000111180 Adamts7Q68SA9 1657 aa17.96■□□□□ 0.47
Trim50-202ENSMUST00000111180 Map4P27546 1125 aaKnown RBP17.96■□□□□ 0.47
Trim50-202ENSMUST00000111180 Txndc2Q6P902 515 aa17.96■□□□□ 0.47
Trim50-202ENSMUST00000111180 Robo2Q7TPD3 1470 aa17.96■□□□□ 0.46
Trim50-202ENSMUST00000111180 Ttc21bQ0HA38 1315 aa17.95■□□□□ 0.46
Trim50-202ENSMUST00000111180 Las1lA2BE28 776 aaKnown RBP17.95■□□□□ 0.46
Trim50-202ENSMUST00000111180 Asxl1P59598 1514 aa17.94■□□□□ 0.46
Trim50-202ENSMUST00000111180 PtprgQ05909 1442 aa17.94■□□□□ 0.46
Trim50-202ENSMUST00000111180 Chd2E9PZM4 1827 aaKnown RBP17.93■□□□□ 0.46
Trim50-202ENSMUST00000111180 Erich6D3Z6S9 713 aa17.93■□□□□ 0.46
Trim50-202ENSMUST00000111180 Ttll5Q8CHB8 1328 aa17.93■□□□□ 0.46
Trim50-202ENSMUST00000111180 Gm13695A2AK44 830 aa17.92■□□□□ 0.46
Trim50-202ENSMUST00000111180 P3h3Q8CG70 732 aa17.92■□□□□ 0.46
Trim50-202ENSMUST00000111180 Iqsec2Q5DU25 1478 aa17.91■□□□□ 0.46
Trim50-202ENSMUST00000111180 Akap12Q9WTQ5 1684 aa17.9■□□□□ 0.46
Trim50-202ENSMUST00000111180 Gemin5Q8BX17 1502 aaKnown RBP17.89■□□□□ 0.46
Trim50-202ENSMUST00000111180 Pik3c2gO70167 1506 aa17.89■□□□□ 0.45
Trim50-202ENSMUST00000111180 Adgrb3Q80ZF8 1522 aa17.89■□□□□ 0.45
Trim50-202ENSMUST00000111180 Pkd2O35245 966 aa17.88■□□□□ 0.45
Trim50-202ENSMUST00000111180 Rprd2Q6NXI6 1469 aaKnown RBP17.88■□□□□ 0.45
Trim50-202ENSMUST00000111180 Psme1P97371 249 aa17.87■□□□□ 0.45
Trim50-202ENSMUST00000111180 Nsd2Q8BVE8 1365 aa17.87■□□□□ 0.45
Trim50-202ENSMUST00000111180 Cd109Q8R422 1442 aa17.87■□□□□ 0.45
Trim50-202ENSMUST00000111180 Iqgap1Q9JKF1 1657 aaKnown RBP17.86■□□□□ 0.45
Trim50-202ENSMUST00000111180 Kdm5aQ3UXZ9 1690 aa17.85■□□□□ 0.45
Trim50-202ENSMUST00000111180 Trak1Q6PD31 939 aa17.85■□□□□ 0.45
Trim50-202ENSMUST00000111180 Tubgcp6G5E8P0 1769 aa17.85■□□□□ 0.45
Trim50-202ENSMUST00000111180 Ylpm1Q9R0I7 1386 aaKnown RBP17.84■□□□□ 0.45
Trim50-202ENSMUST00000111180 PzpQ61838 1495 aa17.84■□□□□ 0.45
Trim50-202ENSMUST00000111180 Stk24Q99KH8 431 aa17.83■□□□□ 0.45
Trim50-202ENSMUST00000111180 Zc3h13E9Q784 1729 aaKnown RBP17.83■□□□□ 0.45
Trim50-202ENSMUST00000111180 Myom3A2ABU4 1439 aa17.83■□□□□ 0.44
Trim50-202ENSMUST00000111180 Hspa5P20029 655 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 32.1 ms