RNA–Protein interactions for RNA: ENSMUST00000110520.9

Trim9-201, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-201ENSMUST00000110520 Zscan10Q3URR7 782 aa12.45□□□□□ -0.42
Trim9-201ENSMUST00000110520 BC005561E9Q5E2 1589 aa12.45□□□□□ -0.42
Trim9-201ENSMUST00000110520 PxdnQ3UQ28 1475 aa12.45□□□□□ -0.42
Trim9-201ENSMUST00000110520 Fam163aQ8CAA5 168 aa12.45□□□□□ -0.42
Trim9-201ENSMUST00000110520 U2af1Q9D883 239 aaKnown RBP12.45□□□□□ -0.42
Trim9-201ENSMUST00000110520 Chmp5Q9D7S9 219 aa12.44□□□□□ -0.42
Trim9-201ENSMUST00000110520 1700019A02RikA0A087WPV9 146 aa12.44□□□□□ -0.42
Trim9-201ENSMUST00000110520 Golga2Q921M4 999 aa12.44□□□□□ -0.42
Trim9-201ENSMUST00000110520 Eif4g1Q6NZJ6 1600 aaKnown RBP12.44□□□□□ -0.42
Trim9-201ENSMUST00000110520 Hsp90ab1P11499 724 aaKnown RBP12.44□□□□□ -0.42
Trim9-201ENSMUST00000110520 Pak3Q61036 559 aa12.43□□□□□ -0.42
Trim9-201ENSMUST00000110520 Fam184bQ0KK56 942 aa12.43□□□□□ -0.42
Trim9-201ENSMUST00000110520 Pla2r1Q62028 1487 aa12.43□□□□□ -0.42
Trim9-201ENSMUST00000110520 Cd109Q8R422 1442 aa12.42□□□□□ -0.42
Trim9-201ENSMUST00000110520 ChgaP26339 463 aaKnown RBP12.42□□□□□ -0.42
Trim9-201ENSMUST00000110520 Neo1P97798 1493 aa12.42□□□□□ -0.42
Trim9-201ENSMUST00000110520 Sall3Q62255 1320 aa12.41□□□□□ -0.42
Trim9-201ENSMUST00000110520 Znf330Q922H9 316 aa12.41□□□□□ -0.42
Trim9-201ENSMUST00000110520 Kif7B7ZNG0 1348 aa12.4□□□□□ -0.42
Trim9-201ENSMUST00000110520 Il16O54824 1322 aa12.4□□□□□ -0.42
Trim9-201ENSMUST00000110520 Mapk8ip3Q9ESN9 1337 aa12.4□□□□□ -0.42
Trim9-201ENSMUST00000110520 Arhgap5P97393 1501 aa12.4□□□□□ -0.42
Trim9-201ENSMUST00000110520 Disp1Q3TDN0 1521 aa12.4□□□□□ -0.42
Trim9-201ENSMUST00000110520 Cluap1Q8R3P7 413 aa12.4□□□□□ -0.43
Trim9-201ENSMUST00000110520 Birc3O08863 600 aa12.39□□□□□ -0.43
Trim9-201ENSMUST00000110520 Ccdc141E9Q8Q6 1531 aa12.39□□□□□ -0.43
Trim9-201ENSMUST00000110520 Zfp444Q3TDV8 331 aaKnown RBP12.39□□□□□ -0.43
Trim9-201ENSMUST00000110520 Myom3A2ABU4 1439 aa12.38□□□□□ -0.43
Trim9-201ENSMUST00000110520 Magi1Q6RHR9 1471 aa12.38□□□□□ -0.43
Trim9-201ENSMUST00000110520 Rock1P70335 1354 aa12.37□□□□□ -0.43
Trim9-201ENSMUST00000110520 Fgd6Q69ZL1 1399 aa12.37□□□□□ -0.43
Trim9-201ENSMUST00000110520 Vsig10D3YX43 558 aa12.37□□□□□ -0.43
Trim9-201ENSMUST00000110520 WizO88286 1684 aaKnown RBP12.37□□□□□ -0.43
Trim9-201ENSMUST00000110520 L3mbtl2P59178 703 aa12.37□□□□□ -0.43
Trim9-201ENSMUST00000110520 Ksr2Q3UVC0 959 aa12.36□□□□□ -0.43
Trim9-201ENSMUST00000110520 Washc2Q6PGL7 1334 aa12.36□□□□□ -0.43
Trim9-201ENSMUST00000110520 Tmco5bQ80X59 307 aa12.36□□□□□ -0.43
Trim9-201ENSMUST00000110520 Mink1Q9JM52 1308 aa12.35□□□□□ -0.43
Trim9-201ENSMUST00000110520 Utp14aQ640M1 767 aaKnown RBP12.35□□□□□ -0.43
Trim9-201ENSMUST00000110520 Plekhg5Q66T02 1073 aa12.35□□□□□ -0.43
Trim9-201ENSMUST00000110520 Rprd2Q6NXI6 1469 aaKnown RBP12.34□□□□□ -0.43
Trim9-201ENSMUST00000110520 Spryd3E9Q9B3 442 aa12.34□□□□□ -0.43
Trim9-201ENSMUST00000110520 Hsp90aa1P07901 733 aaKnown RBP12.33□□□□□ -0.44
Trim9-201ENSMUST00000110520 Ccdc27Q3V036 639 aa12.33□□□□□ -0.44
Trim9-201ENSMUST00000110520 Gm14025A2AP89 1413 aa12.33□□□□□ -0.44
Trim9-201ENSMUST00000110520 Ncoa1P70365 1447 aa12.33□□□□□ -0.44
Trim9-201ENSMUST00000110520 U2surpQ6NV83 1029 aaKnown RBP12.33□□□□□ -0.44
Trim9-201ENSMUST00000110520 Shq1Q7TMX5 569 aa12.33□□□□□ -0.44
Trim9-201ENSMUST00000110520 Fgd1P52734 960 aa12.32□□□□□ -0.44
Trim9-201ENSMUST00000110520 Tsen2Q6P7W5 460 aa12.32□□□□□ -0.44
Trim9-201ENSMUST00000110520 Puf60Q3UEB3 564 aaKnown RBP12.32□□□□□ -0.44
Trim9-201ENSMUST00000110520 Arhgef40Q3UPH7 1517 aa12.31□□□□□ -0.44
Trim9-201ENSMUST00000110520 Kdm5bQ80Y84 1544 aa12.31□□□□□ -0.44
Trim9-201ENSMUST00000110520 Erich3F6QRE9 1637 aa12.31□□□□□ -0.44
Trim9-201ENSMUST00000110520 Ppp2r1aQ76MZ3 589 aa12.31□□□□□ -0.44
Trim9-201ENSMUST00000110520 MyclP10166 368 aa12.31□□□□□ -0.44
Trim9-201ENSMUST00000110520 Prdm16A2A935 1275 aa12.3□□□□□ -0.44
Trim9-201ENSMUST00000110520 Txndc2Q6P902 515 aa12.3□□□□□ -0.44
Trim9-201ENSMUST00000110520 Adgrb2Q8CGM1 1561 aa12.3□□□□□ -0.44
Trim9-201ENSMUST00000110520 Magi3Q9EQJ9 1476 aa12.3□□□□□ -0.44
Trim9-201ENSMUST00000110520 Kif21aQ9QXL2 1672 aa12.3□□□□□ -0.44
Trim9-201ENSMUST00000110520 ErbinQ80TH2 1402 aa12.3□□□□□ -0.44
Trim9-201ENSMUST00000110520 Sox12Q04890 314 aa12.3□□□□□ -0.44
Trim9-201ENSMUST00000110520 Unc13aQ4KUS2 1712 aa12.3□□□□□ -0.44
Trim9-201ENSMUST00000110520 EspnQ9ET47 871 aa12.3□□□□□ -0.44
Trim9-201ENSMUST00000110520 PrxO55103 1391 aa12.29□□□□□ -0.44
Trim9-201ENSMUST00000110520 Pibf1E9Q6K3 756 aa12.29□□□□□ -0.44
Trim9-201ENSMUST00000110520 Pabpn1Q8CCS6 302 aaKnown RBP12.29□□□□□ -0.44
Trim9-201ENSMUST00000110520 Ccdc30Q8BVF4 654 aa12.29□□□□□ -0.44
Trim9-201ENSMUST00000110520 Trappc8E9PWG2 1437 aa12.28□□□□□ -0.44
Trim9-201ENSMUST00000110520 Ipo9Q91YE6 1041 aa12.28□□□□□ -0.44
Trim9-201ENSMUST00000110520 Lmo7E9PYF4 1699 aaKnown RBP12.28□□□□□ -0.44
Trim9-201ENSMUST00000110520 Pank1Q8K4K6 548 aa12.27□□□□□ -0.45
Trim9-201ENSMUST00000110520 Rfx7F8VPJ6 1459 aa12.27□□□□□ -0.45
Trim9-201ENSMUST00000110520 Apaf1O88879 1249 aa12.27□□□□□ -0.45
Trim9-201ENSMUST00000110520 Nsd2Q8BVE8 1365 aa12.27□□□□□ -0.45
Trim9-201ENSMUST00000110520 Fam135aQ6NS59 1506 aa12.27□□□□□ -0.45
Trim9-201ENSMUST00000110520 DekQ7TNV0 380 aaKnown RBP12.26□□□□□ -0.45
Trim9-201ENSMUST00000110520 Psme1P97371 249 aa12.26□□□□□ -0.45
Trim9-201ENSMUST00000110520 GsdmaQ9EST1 446 aa12.26□□□□□ -0.45
Trim9-201ENSMUST00000110520 Bcl11aQ9QYE3 773 aa12.26□□□□□ -0.45
Trim9-201ENSMUST00000110520 Kif16bB1AVY7 1312 aa12.26□□□□□ -0.45
Trim9-201ENSMUST00000110520 Q9D9H8 365 aa12.26□□□□□ -0.45
Trim9-201ENSMUST00000110520 Shroom2A2ALU4 1481 aa12.25□□□□□ -0.45
Trim9-201ENSMUST00000110520 Mbd3Q9Z2D8 285 aaKnown RBP12.25□□□□□ -0.45
Trim9-201ENSMUST00000110520 Prex2Q3LAC4 1598 aa12.24□□□□□ -0.45
Trim9-201ENSMUST00000110520 Ppm1gQ61074 542 aa12.24□□□□□ -0.45
Trim9-201ENSMUST00000110520 Pik3c2gO70167 1506 aa12.24□□□□□ -0.45
Trim9-201ENSMUST00000110520 Dnai1Q8C0M8 701 aa12.24□□□□□ -0.45
Trim9-201ENSMUST00000110520 CenpjQ569L8 1344 aa12.22□□□□□ -0.45
Trim9-201ENSMUST00000110520 Ttll13A4Q9F6 804 aa12.22□□□□□ -0.45
Trim9-201ENSMUST00000110520 Stard8Q8K031 1019 aa12.21□□□□□ -0.45
Trim9-201ENSMUST00000110520 Lmtk2Q3TYD6 1471 aa12.21□□□□□ -0.45
Trim9-201ENSMUST00000110520 Rapgef6Q5NCJ1 1609 aa12.2□□□□□ -0.46
Trim9-201ENSMUST00000110520 Ccdc60Q8C4J0 545 aa12.2□□□□□ -0.46
Trim9-201ENSMUST00000110520 Zranb1Q7M760 708 aa12.2□□□□□ -0.46
Trim9-201ENSMUST00000110520 Mlh3A0A1Y7VMP7 1443 aa12.2□□□□□ -0.46
Trim9-201ENSMUST00000110520 Nutm1Q8BHP2 1126 aa12.2□□□□□ -0.46
Trim9-201ENSMUST00000110520 Nectin2P32507 530 aa12.19□□□□□ -0.46
Trim9-201ENSMUST00000110520 Mfap1aC0HKD8 439 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 44.3 ms