RNA–Protein interactions for RNA: ENSMUST00000108809.7

Trim11-202, Transcript of E3 ubiquitin-protein ligase TRIM11, mousemouse

TSL 1 (best) BASIC

Gene Trim11, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11-202ENSMUST00000108809 Pdcd11Q6NS46 1862 aaKnown RBP15.82■□□□□ 0.12
Trim11-202ENSMUST00000108809 Neurl4Q5NCX5 1563 aa15.82■□□□□ 0.12
Trim11-202ENSMUST00000108809 Setd1aE9PYH6 1716 aa15.82■□□□□ 0.12
Trim11-202ENSMUST00000108809 Rnf17Q99MV7 1640 aa15.81■□□□□ 0.12
Trim11-202ENSMUST00000108809 Eif5bQ05D44 1216 aaKnown RBP15.81■□□□□ 0.12
Trim11-202ENSMUST00000108809 Rock2P70336 1388 aa15.81■□□□□ 0.12
Trim11-202ENSMUST00000108809 Ssh2Q5SW75 1423 aa15.81■□□□□ 0.12
Trim11-202ENSMUST00000108809 Supt16hQ920B9 1047 aa15.8■□□□□ 0.12
Trim11-202ENSMUST00000108809 Map4P27546 1125 aaKnown RBP15.8■□□□□ 0.12
Trim11-202ENSMUST00000108809 Wdr43Q6ZQL4 677 aaKnown RBP15.8■□□□□ 0.12
Trim11-202ENSMUST00000108809 Jph4Q80WT0 628 aa15.79■□□□□ 0.12
Trim11-202ENSMUST00000108809 Eif4g3Q80XI3 1579 aaKnown RBP15.79■□□□□ 0.12
Trim11-202ENSMUST00000108809 Kdm5cP41230 1554 aa15.77■□□□□ 0.11
Trim11-202ENSMUST00000108809 Ppp4r2Q0VGB7 417 aa15.76■□□□□ 0.11
Trim11-202ENSMUST00000108809 Hecw1Q8K4P8 1604 aa15.76■□□□□ 0.11
Trim11-202ENSMUST00000108809 P3h3Q8CG70 732 aa15.75■□□□□ 0.11
Trim11-202ENSMUST00000108809 Ifnlr1Q8CGK5 535 aa15.75■□□□□ 0.11
Trim11-202ENSMUST00000108809 Tarbp1E9Q368 1579 aa15.75■□□□□ 0.11
Trim11-202ENSMUST00000108809 Grwd1Q810D6 446 aaKnown RBP15.74■□□□□ 0.11
Trim11-202ENSMUST00000108809 Cfap74Q3UY96 1578 aa15.73■□□□□ 0.11
Trim11-202ENSMUST00000108809 Kiaa1210E9Q0C6 1637 aa15.73■□□□□ 0.11
Trim11-202ENSMUST00000108809 Arhgap5P97393 1501 aa15.73■□□□□ 0.11
Trim11-202ENSMUST00000108809 Trappc8E9PWG2 1437 aa15.73■□□□□ 0.11
Trim11-202ENSMUST00000108809 Ppip5k1A2ARP1 1436 aa15.72■□□□□ 0.11
Trim11-202ENSMUST00000108809 Atp7aQ64430 1491 aa15.72■□□□□ 0.11
Trim11-202ENSMUST00000108809 Rtl5Q5DTT4 599 aa15.72■□□□□ 0.11
Trim11-202ENSMUST00000108809 Ofd1Q80Z25 1017 aa15.71■□□□□ 0.11
Trim11-202ENSMUST00000108809 Robo2Q7TPD3 1470 aa15.7■□□□□ 0.1
Trim11-202ENSMUST00000108809 L3mbtl2P59178 703 aa15.7■□□□□ 0.1
Trim11-202ENSMUST00000108809 Cdc42bpbQ7TT50 1713 aa15.7■□□□□ 0.1
Trim11-202ENSMUST00000108809 Liat1Q810M6 228 aa15.69■□□□□ 0.1
Trim11-202ENSMUST00000108809 NhsB1AV60 1647 aa15.69■□□□□ 0.1
Trim11-202ENSMUST00000108809 Adamts13Q769J6 1426 aa15.69■□□□□ 0.1
Trim11-202ENSMUST00000108809 Cd109Q8R422 1442 aa15.69■□□□□ 0.1
Trim11-202ENSMUST00000108809 Abcc3B2RX12 1523 aa15.69■□□□□ 0.1
Trim11-202ENSMUST00000108809 Clstn2Q9ER65 966 aa15.67■□□□□ 0.1
Trim11-202ENSMUST00000108809 Fgd6Q69ZL1 1399 aa15.66■□□□□ 0.1
Trim11-202ENSMUST00000108809 Zmym4A2A791 1549 aaKnown RBP15.66■□□□□ 0.1
Trim11-202ENSMUST00000108809 Cep170Q6A065 1588 aa15.66■□□□□ 0.1
Trim11-202ENSMUST00000108809 Fkbp15Q6P9Q6 1216 aaKnown RBP15.65■□□□□ 0.1
Trim11-202ENSMUST00000108809 Kank1E9Q238 1360 aa15.65■□□□□ 0.1
Trim11-202ENSMUST00000108809 AknaQ80VW7 1404 aa15.65■□□□□ 0.1
Trim11-202ENSMUST00000108809 Rrp7aQ9D1C9 280 aaKnown RBP15.64■□□□□ 0.09
Trim11-202ENSMUST00000108809 PrkcshO08795 521 aa15.64■□□□□ 0.09
Trim11-202ENSMUST00000108809 Plch2A2AP18 1501 aa15.63■□□□□ 0.09
Trim11-202ENSMUST00000108809 Abca8bQ8K440 1620 aa15.63■□□□□ 0.09
Trim11-202ENSMUST00000108809 Erbb3Q61526 1339 aa15.62■□□□□ 0.09
Trim11-202ENSMUST00000108809 Abca17E9PX95 1733 aa15.62■□□□□ 0.09
Trim11-202ENSMUST00000108809 Rpgrip1lQ8CG73 1264 aa15.62■□□□□ 0.09
Trim11-202ENSMUST00000108809 Mink1Q9JM52 1308 aa15.62■□□□□ 0.09
Trim11-202ENSMUST00000108809 Gm14025A2AP89 1413 aa15.62■□□□□ 0.09
Trim11-202ENSMUST00000108809 Sart1Q9Z315 806 aaKnown RBP15.61■□□□□ 0.09
Trim11-202ENSMUST00000108809 AI481877A2ALV5 1481 aa15.61■□□□□ 0.09
Trim11-202ENSMUST00000108809 Egfem1Q8C088 590 aa15.6■□□□□ 0.09
Trim11-202ENSMUST00000108809 Chd1P40201 1711 aa15.6■□□□□ 0.09
Trim11-202ENSMUST00000108809 Pak3Q61036 559 aa15.6■□□□□ 0.09
Trim11-202ENSMUST00000108809 ShprhQ7TPQ3 1674 aa15.6■□□□□ 0.09
Trim11-202ENSMUST00000108809 Edc4Q3UJB9 1406 aaKnown RBP15.6■□□□□ 0.09
Trim11-202ENSMUST00000108809 Tulp4Q9JIL5 1547 aa15.58■□□□□ 0.09
Trim11-202ENSMUST00000108809 Ttbk1Q6PCN3 1308 aa15.58■□□□□ 0.08
Trim11-202ENSMUST00000108809 Kidins220E9Q9B7 1793 aa15.58■□□□□ 0.08
Trim11-202ENSMUST00000108809 Usp54Q8BL06 1588 aaKnown RBP15.57■□□□□ 0.08
Trim11-202ENSMUST00000108809 Kif1bQ60575 1816 aaKnown RBP15.57■□□□□ 0.08
Trim11-202ENSMUST00000108809 PrxO55103 1391 aa15.56■□□□□ 0.08
Trim11-202ENSMUST00000108809 Zscan21Q07231 555 aa15.56■□□□□ 0.08
Trim11-202ENSMUST00000108809 Tex14Q7M6U3 1450 aa15.56■□□□□ 0.08
Trim11-202ENSMUST00000108809 Kcnh8P59111 1102 aa15.56■□□□□ 0.08
Trim11-202ENSMUST00000108809 Zfp444Q3TDV8 331 aaKnown RBP15.56■□□□□ 0.08
Trim11-202ENSMUST00000108809 Xrn1P97789 1719 aaKnown RBP15.55■□□□□ 0.08
Trim11-202ENSMUST00000108809 Prdm16A2A935 1275 aa15.55■□□□□ 0.08
Trim11-202ENSMUST00000108809 Pelp1Q9DBD5 1123 aaKnown RBP15.55■□□□□ 0.08
Trim11-202ENSMUST00000108809 Spag9Q58A65 1321 aaKnown RBP15.55■□□□□ 0.08
Trim11-202ENSMUST00000108809 Pola1P33609 1465 aa15.55■□□□□ 0.08
Trim11-202ENSMUST00000108809 Sbno1Q689Z5 1390 aa15.54■□□□□ 0.08
Trim11-202ENSMUST00000108809 Q7TT23 1179 aa15.54■□□□□ 0.08
Trim11-202ENSMUST00000108809 Zbtb7cQ8VCZ7 619 aa15.54■□□□□ 0.08
Trim11-202ENSMUST00000108809 Mak16Q8BGS0 296 aaKnown RBP15.53■□□□□ 0.08
Trim11-202ENSMUST00000108809 Uggt2E9Q4X2 1504 aa15.53■□□□□ 0.08
Trim11-202ENSMUST00000108809 Ifit1bl1D3Z6F0 470 aa15.53■□□□□ 0.08
Trim11-202ENSMUST00000108809 Abcc1O35379 1528 aa15.52■□□□□ 0.08
Trim11-202ENSMUST00000108809 Pde4cQ3UEI1 686 aa15.52■□□□□ 0.07
Trim11-202ENSMUST00000108809 Pank3Q8R2W9 370 aa15.51■□□□□ 0.07
Trim11-202ENSMUST00000108809 Clasp1Q80TV8 1535 aaKnown RBP15.51■□□□□ 0.07
Trim11-202ENSMUST00000108809 Slc4a3P16283 1227 aa15.51■□□□□ 0.07
Trim11-202ENSMUST00000108809 Atp10dQ8K2X1 1416 aa15.51■□□□□ 0.07
Trim11-202ENSMUST00000108809 Myo5cE9Q1F5 1742 aa15.51■□□□□ 0.07
Trim11-202ENSMUST00000108809 Tcerg1Q8CGF7 1100 aaKnown RBP15.5■□□□□ 0.07
Trim11-202ENSMUST00000108809 Anp32bQ9EST5 272 aaKnown RBP15.5■□□□□ 0.07
Trim11-202ENSMUST00000108809 Arid4bA2CG63 1314 aaKnown RBP15.5■□□□□ 0.07
Trim11-202ENSMUST00000108809 AnkarA2RT91 1465 aa15.5■□□□□ 0.07
Trim11-202ENSMUST00000108809 TnikP83510 1323 aa15.49■□□□□ 0.07
Trim11-202ENSMUST00000108809 Gm16486A0A1D5RMD1 1434 aa15.49■□□□□ 0.07
Trim11-202ENSMUST00000108809 Abcc6Q9R1S7 1498 aa15.48■□□□□ 0.07
Trim11-202ENSMUST00000108809 Nsd2Q8BVE8 1365 aa15.48■□□□□ 0.07
Trim11-202ENSMUST00000108809 Itsn2Q9Z0R6 1659 aa15.48■□□□□ 0.07
Trim11-202ENSMUST00000108809 Inpp5dQ9ES52 1191 aa15.48■□□□□ 0.07
Trim11-202ENSMUST00000108809 Map3k5O35099 1380 aa15.47■□□□□ 0.07
Trim11-202ENSMUST00000108809 Ttc41Q692V3 1318 aa15.47■□□□□ 0.07
Trim11-202ENSMUST00000108809 Zscan10Q3URR7 782 aa15.47■□□□□ 0.07
Trim11-202ENSMUST00000108809 Ak9G3UYQ4 1894 aa15.47■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 43.8 ms