RNA–Protein interactions for RNA: ENSMUST00000098613.8

Usp3-202, Transcript of Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

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Gene Usp3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3-202ENSMUST00000098613 Prkrip1Q9CWV6 186 aaKnown RBP11.48□□□□□ -0.57
Usp3-202ENSMUST00000098613 Anp32bQ9EST5 272 aaKnown RBP11.48□□□□□ -0.57
Usp3-202ENSMUST00000098613 Sart3Q9JLI8 962 aaKnown RBP11.48□□□□□ -0.57
Usp3-202ENSMUST00000098613 CrbnQ8C7D2 445 aa11.47□□□□□ -0.57
Usp3-202ENSMUST00000098613 Plb1Q3TTY0 1478 aa11.47□□□□□ -0.57
Usp3-202ENSMUST00000098613 Cdc42bpaQ3UU96 1719 aa11.46□□□□□ -0.57
Usp3-202ENSMUST00000098613 Esx1O88933 382 aa11.46□□□□□ -0.57
Usp3-202ENSMUST00000098613 Arhgef12Q8R4H2 1543 aaKnown RBP11.45□□□□□ -0.58
Usp3-202ENSMUST00000098613 Mrc2Q64449 1479 aa11.45□□□□□ -0.58
Usp3-202ENSMUST00000098613 Fkbp15Q6P9Q6 1216 aaKnown RBP11.45□□□□□ -0.58
Usp3-202ENSMUST00000098613 Cc2d2bA0A286YDU8 1405 aa11.45□□□□□ -0.58
Usp3-202ENSMUST00000098613 Tdrd9Q14BI7 1383 aa11.45□□□□□ -0.58
Usp3-202ENSMUST00000098613 Nup155Q99P88 1391 aaKnown RBP11.45□□□□□ -0.58
Usp3-202ENSMUST00000098613 Il16O54824 1322 aa11.45□□□□□ -0.58
Usp3-202ENSMUST00000098613 Map4P27546 1125 aaKnown RBP11.45□□□□□ -0.58
Usp3-202ENSMUST00000098613 Inpp5dQ9ES52 1191 aa11.45□□□□□ -0.58
Usp3-202ENSMUST00000098613 Arhgef11Q68FM7 1552 aa11.44□□□□□ -0.58
Usp3-202ENSMUST00000098613 Nkx1-2P42580 305 aa11.44□□□□□ -0.58
Usp3-202ENSMUST00000098613 RalgapbQ8BQZ4 1484 aa11.44□□□□□ -0.58
Usp3-202ENSMUST00000098613 ArxO35085 564 aa11.43□□□□□ -0.58
Usp3-202ENSMUST00000098613 Pank3Q8R2W9 370 aa11.43□□□□□ -0.58
Usp3-202ENSMUST00000098613 Rock2P70336 1388 aa11.43□□□□□ -0.58
Usp3-202ENSMUST00000098613 Pbrm1Q8BSQ9 1634 aaKnown RBP11.41□□□□□ -0.58
Usp3-202ENSMUST00000098613 Kiaa1551Q5DTW7 1521 aa11.41□□□□□ -0.58
Usp3-202ENSMUST00000098613 Ccdc9Q8VC31 543 aaKnown RBP11.41□□□□□ -0.58
Usp3-202ENSMUST00000098613 Mink1Q9JM52 1308 aa11.39□□□□□ -0.59
Usp3-202ENSMUST00000098613 Ifit1bl1D3Z6F0 470 aa11.39□□□□□ -0.59
Usp3-202ENSMUST00000098613 Chmp5Q9D7S9 219 aa11.39□□□□□ -0.59
Usp3-202ENSMUST00000098613 PrxO55103 1391 aa11.38□□□□□ -0.59
Usp3-202ENSMUST00000098613 Arhgap31A6X8Z5 1425 aa11.38□□□□□ -0.59
Usp3-202ENSMUST00000098613 4930567H17RikQ3V0K5 233 aa11.38□□□□□ -0.59
Usp3-202ENSMUST00000098613 Kif16bB1AVY7 1312 aa11.37□□□□□ -0.59
Usp3-202ENSMUST00000098613 Zmym4A2A791 1549 aaKnown RBP11.37□□□□□ -0.59
Usp3-202ENSMUST00000098613 Prdm10Q3UTQ7 1184 aa11.37□□□□□ -0.59
Usp3-202ENSMUST00000098613 Neurod2Q62414 383 aa11.37□□□□□ -0.59
Usp3-202ENSMUST00000098613 Dnai1Q8C0M8 701 aa11.37□□□□□ -0.59
Usp3-202ENSMUST00000098613 Nup160Q9Z0W3 1402 aaKnown RBP11.37□□□□□ -0.59
Usp3-202ENSMUST00000098613 Abcc2Q8VI47 1543 aa11.36□□□□□ -0.59
Usp3-202ENSMUST00000098613 NudcO35685 332 aaKnown RBP11.36□□□□□ -0.59
Usp3-202ENSMUST00000098613 Prex2Q3LAC4 1598 aa11.36□□□□□ -0.59
Usp3-202ENSMUST00000098613 Fgd1P52734 960 aa11.35□□□□□ -0.59
Usp3-202ENSMUST00000098613 Polr3aB2RXC6 1390 aa11.35□□□□□ -0.59
Usp3-202ENSMUST00000098613 Rock1P70335 1354 aa11.35□□□□□ -0.59
Usp3-202ENSMUST00000098613 TnikP83510 1323 aa11.35□□□□□ -0.59
Usp3-202ENSMUST00000098613 Kdm2bQ6P1G2 1309 aa11.35□□□□□ -0.59
Usp3-202ENSMUST00000098613 Eif2s2Q99L45 331 aaKnown RBP11.35□□□□□ -0.59
Usp3-202ENSMUST00000098613 Dot1lQ6XZL8 1540 aa11.35□□□□□ -0.59
Usp3-202ENSMUST00000098613 Shroom2A2ALU4 1481 aa11.35□□□□□ -0.59
Usp3-202ENSMUST00000098613 Trim30dE9PWL0 497 aa11.34□□□□□ -0.59
Usp3-202ENSMUST00000098613 Rrp7aQ9D1C9 280 aaKnown RBP11.34□□□□□ -0.59
Usp3-202ENSMUST00000098613 EspnQ9ET47 871 aa11.34□□□□□ -0.59
Usp3-202ENSMUST00000098613 Cpsf1Q9EPU4 1441 aaKnown RBP11.34□□□□□ -0.59
Usp3-202ENSMUST00000098613 Asxl1P59598 1514 aa11.34□□□□□ -0.59
Usp3-202ENSMUST00000098613 Trpm2Q91YD4 1506 aa11.34□□□□□ -0.59
Usp3-202ENSMUST00000098613 Zscan10Q3URR7 782 aa11.34□□□□□ -0.59
Usp3-202ENSMUST00000098613 Kdm5cP41230 1554 aa11.34□□□□□ -0.59
Usp3-202ENSMUST00000098613 Mroh3A0A1D5RM54 893 aa11.33□□□□□ -0.6
Usp3-202ENSMUST00000098613 Slc4a1apE9PX68 744 aa11.33□□□□□ -0.6
Usp3-202ENSMUST00000098613 Rwdd1Q9CQK7 243 aa11.33□□□□□ -0.6
Usp3-202ENSMUST00000098613 Tarbp1E9Q368 1579 aa11.33□□□□□ -0.6
Usp3-202ENSMUST00000098613 Dcaf11Q91VU6 549 aa11.33□□□□□ -0.6
Usp3-202ENSMUST00000098613 Mroh2aD3Z750 1679 aa11.32□□□□□ -0.6
Usp3-202ENSMUST00000098613 Ccdc141E9Q8Q6 1531 aa11.32□□□□□ -0.6
Usp3-202ENSMUST00000098613 Tspyl2Q7TQI8 677 aa11.32□□□□□ -0.6
Usp3-202ENSMUST00000098613 Iqgap1Q9JKF1 1657 aaKnown RBP11.31□□□□□ -0.6
Usp3-202ENSMUST00000098613 Tubgcp6G5E8P0 1769 aa11.31□□□□□ -0.6
Usp3-202ENSMUST00000098613 Kdm2aP59997 1161 aa11.31□□□□□ -0.6
Usp3-202ENSMUST00000098613 Speer4f1Q9D5Q6 258 aa11.31□□□□□ -0.6
Usp3-202ENSMUST00000098613 Magi1Q6RHR9 1471 aa11.31□□□□□ -0.6
Usp3-202ENSMUST00000098613 Mapkbp1Q6NS57 1503 aa11.31□□□□□ -0.6
Usp3-202ENSMUST00000098613 Ppp2r1aQ76MZ3 589 aa11.3□□□□□ -0.6
Usp3-202ENSMUST00000098613 Armcx1Q9CX83 456 aa11.3□□□□□ -0.6
Usp3-202ENSMUST00000098613 DroshaQ5HZJ0 1373 aaKnown RBP11.3□□□□□ -0.6
Usp3-202ENSMUST00000098613 Zcchc11B2RX14 1644 aaKnown RBP11.29□□□□□ -0.6
Usp3-202ENSMUST00000098613 Erich6D3Z6S9 713 aa11.29□□□□□ -0.6
Usp3-202ENSMUST00000098613 Spryd3E9Q9B3 442 aa11.29□□□□□ -0.6
Usp3-202ENSMUST00000098613 Ak7Q9D2H2 614 aa11.29□□□□□ -0.6
Usp3-202ENSMUST00000098613 Plch2A2AP18 1501 aa11.29□□□□□ -0.6
Usp3-202ENSMUST00000098613 Gas2l2Q5SSG4 860 aa11.28□□□□□ -0.6
Usp3-202ENSMUST00000098613 Mre11Q61216 706 aa11.28□□□□□ -0.6
Usp3-202ENSMUST00000098613 Tmf1B9EKI3 1091 aa11.28□□□□□ -0.6
Usp3-202ENSMUST00000098613 Hsp90ab1P11499 724 aaKnown RBP11.28□□□□□ -0.6
Usp3-202ENSMUST00000098613 Ssh2Q5SW75 1423 aa11.28□□□□□ -0.6
Usp3-202ENSMUST00000098613 Atp7aQ64430 1491 aa11.28□□□□□ -0.6
Usp3-202ENSMUST00000098613 Ipo4Q8VI75 1082 aa11.28□□□□□ -0.6
Usp3-202ENSMUST00000098613 Cd109Q8R422 1442 aa11.27□□□□□ -0.6
Usp3-202ENSMUST00000098613 Smc5Q8CG46 1101 aaKnown RBP11.27□□□□□ -0.61
Usp3-202ENSMUST00000098613 Fmn2Q9JL04 1578 aa11.27□□□□□ -0.61
Usp3-202ENSMUST00000098613 Gm6268A2A3U9 297 aa11.27□□□□□ -0.61
Usp3-202ENSMUST00000098613 Mlh3A0A1Y7VMP7 1443 aa11.26□□□□□ -0.61
Usp3-202ENSMUST00000098613 Tex14Q7M6U3 1450 aa11.26□□□□□ -0.61
Usp3-202ENSMUST00000098613 Ppm1gQ61074 542 aa11.26□□□□□ -0.61
Usp3-202ENSMUST00000098613 Mbd3Q9Z2D8 285 aaKnown RBP11.26□□□□□ -0.61
Usp3-202ENSMUST00000098613 Plekhh1Q80TI1 1356 aa11.26□□□□□ -0.61
Usp3-202ENSMUST00000098613 Gapvd1Q6PAR5 1458 aa11.26□□□□□ -0.61
Usp3-202ENSMUST00000098613 Pank1Q8K4K6 548 aa11.25□□□□□ -0.61
Usp3-202ENSMUST00000098613 Caskin1Q6P9K8 1431 aa11.25□□□□□ -0.61
Usp3-202ENSMUST00000098613 Ccdc30Q8BVF4 654 aa11.25□□□□□ -0.61
Usp3-202ENSMUST00000098613 PtprgQ05909 1442 aa11.24□□□□□ -0.61
Usp3-202ENSMUST00000098613 Fam163aQ8CAA5 168 aa11.24□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms