RNA–Protein interactions for RNA: ENSMUST00000095899.4

Syne1-202, Transcript of Nesprin-1, mousemouse

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Gene Syne1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-202ENSMUST00000095899 Kidins220E9Q9B7 1793 aa11.41□□□□□ -0.58
Syne1-202ENSMUST00000095899 Trappc8E9PWG2 1437 aa11.4□□□□□ -0.58
Syne1-202ENSMUST00000095899 Cpsf1Q9EPU4 1441 aaKnown RBP11.39□□□□□ -0.59
Syne1-202ENSMUST00000095899 Cfap74Q3UY96 1578 aa11.39□□□□□ -0.59
Syne1-202ENSMUST00000095899 Myom3A2ABU4 1439 aa11.38□□□□□ -0.59
Syne1-202ENSMUST00000095899 Dnajc5P60904 198 aa11.38□□□□□ -0.59
Syne1-202ENSMUST00000095899 Atp10dQ8K2X1 1416 aa11.38□□□□□ -0.59
Syne1-202ENSMUST00000095899 Gm156Q58A37 223 aa11.38□□□□□ -0.59
Syne1-202ENSMUST00000095899 RalgapbQ8BQZ4 1484 aa11.38□□□□□ -0.59
Syne1-202ENSMUST00000095899 Setd1aE9PYH6 1716 aa11.37□□□□□ -0.59
Syne1-202ENSMUST00000095899 Tarbp1E9Q368 1579 aa11.37□□□□□ -0.59
Syne1-202ENSMUST00000095899 Xrn1P97789 1719 aaKnown RBP11.37□□□□□ -0.59
Syne1-202ENSMUST00000095899 Adamts13Q769J6 1426 aa11.36□□□□□ -0.59
Syne1-202ENSMUST00000095899 Abca9Q8K449 1623 aa11.36□□□□□ -0.59
Syne1-202ENSMUST00000095899 ShprhQ7TPQ3 1674 aa11.36□□□□□ -0.59
Syne1-202ENSMUST00000095899 Clasp1Q80TV8 1535 aaKnown RBP11.36□□□□□ -0.59
Syne1-202ENSMUST00000095899 Zfyve16Q80U44 1528 aa11.35□□□□□ -0.59
Syne1-202ENSMUST00000095899 Dapk1Q80YE7 1442 aa11.35□□□□□ -0.59
Syne1-202ENSMUST00000095899 Plekhg5Q66T02 1073 aa11.35□□□□□ -0.59
Syne1-202ENSMUST00000095899 Nup155Q99P88 1391 aaKnown RBP11.35□□□□□ -0.59
Syne1-202ENSMUST00000095899 Ttc37F8VPK0 1563 aa11.35□□□□□ -0.59
Syne1-202ENSMUST00000095899 Rock1P70335 1354 aa11.34□□□□□ -0.59
Syne1-202ENSMUST00000095899 Gm38655A0A286YDK6 273 aa11.34□□□□□ -0.59
Syne1-202ENSMUST00000095899 Arhgap5P97393 1501 aa11.34□□□□□ -0.59
Syne1-202ENSMUST00000095899 Trak1Q6PD31 939 aa11.33□□□□□ -0.6
Syne1-202ENSMUST00000095899 Slc4a2P13808 1237 aaKnown RBP11.32□□□□□ -0.6
Syne1-202ENSMUST00000095899 Kiaa0556Q8C753 1610 aa11.32□□□□□ -0.6
Syne1-202ENSMUST00000095899 SafbD3YXK2 937 aaKnown RBP11.32□□□□□ -0.6
Syne1-202ENSMUST00000095899 Cul9Q80TT8 1865 aa11.32□□□□□ -0.6
Syne1-202ENSMUST00000095899 Tmem131lQ3U3D7 1597 aa11.32□□□□□ -0.6
Syne1-202ENSMUST00000095899 Polr3aB2RXC6 1390 aa11.32□□□□□ -0.6
Syne1-202ENSMUST00000095899 Ppip5k1A2ARP1 1436 aa11.31□□□□□ -0.6
Syne1-202ENSMUST00000095899 Kdm5cP41230 1554 aa11.31□□□□□ -0.6
Syne1-202ENSMUST00000095899 Atp7aQ64430 1491 aa11.31□□□□□ -0.6
Syne1-202ENSMUST00000095899 AglF8VPN4 1532 aa11.31□□□□□ -0.6
Syne1-202ENSMUST00000095899 Myo5cE9Q1F5 1742 aa11.31□□□□□ -0.6
Syne1-202ENSMUST00000095899 Fam71e1A1L3C1 212 aa11.31□□□□□ -0.6
Syne1-202ENSMUST00000095899 Fkbp15Q6P9Q6 1216 aaKnown RBP11.3□□□□□ -0.6
Syne1-202ENSMUST00000095899 Gm13695A2AK44 830 aa11.3□□□□□ -0.6
Syne1-202ENSMUST00000095899 Fndc1E9Q043 1732 aa11.29□□□□□ -0.6
Syne1-202ENSMUST00000095899 AdgbG3UZ78 1657 aa11.29□□□□□ -0.6
Syne1-202ENSMUST00000095899 Ttbk1Q6PCN3 1308 aa11.29□□□□□ -0.6
Syne1-202ENSMUST00000095899 Tnnt3Q9QZ47 272 aa11.29□□□□□ -0.6
Syne1-202ENSMUST00000095899 Usp54Q8BL06 1588 aaKnown RBP11.29□□□□□ -0.6
Syne1-202ENSMUST00000095899 PnisrA2AJT4 805 aaKnown RBP11.28□□□□□ -0.6
Syne1-202ENSMUST00000095899 Washc2Q6PGL7 1334 aa11.28□□□□□ -0.6
Syne1-202ENSMUST00000095899 Kif1bQ60575 1816 aaKnown RBP11.28□□□□□ -0.6
Syne1-202ENSMUST00000095899 Prdm2A2A7B5 1709 aaKnown RBP11.27□□□□□ -0.6
Syne1-202ENSMUST00000095899 Map4P27546 1125 aaKnown RBP11.26□□□□□ -0.61
Syne1-202ENSMUST00000095899 Edc4Q3UJB9 1406 aaKnown RBP11.26□□□□□ -0.61
Syne1-202ENSMUST00000095899 Rundc1Q0VDN7 615 aa11.25□□□□□ -0.61
Syne1-202ENSMUST00000095899 Rgl3Q3UYI5 709 aa11.25□□□□□ -0.61
Syne1-202ENSMUST00000095899 Tulp4Q9JIL5 1547 aa11.25□□□□□ -0.61
Syne1-202ENSMUST00000095899 Cd109Q8R422 1442 aa11.24□□□□□ -0.61
Syne1-202ENSMUST00000095899 Depdc5P61460 1591 aa11.24□□□□□ -0.61
Syne1-202ENSMUST00000095899 Uggt2E9Q4X2 1504 aa11.24□□□□□ -0.61
Syne1-202ENSMUST00000095899 Trpm1Q2TV84 1622 aa11.23□□□□□ -0.61
Syne1-202ENSMUST00000095899 Cwc22Q8C5N3 908 aaKnown RBP11.23□□□□□ -0.61
Syne1-202ENSMUST00000095899 Exoc6Q8R313 802 aa11.22□□□□□ -0.61
Syne1-202ENSMUST00000095899 Sart1Q9Z315 806 aaKnown RBP11.22□□□□□ -0.61
Syne1-202ENSMUST00000095899 Stra8P70278 393 aa11.22□□□□□ -0.61
Syne1-202ENSMUST00000095899 Wwc2Q6NXJ0 1187 aa11.22□□□□□ -0.61
Syne1-202ENSMUST00000095899 Nos1Q9Z0J4 1429 aa11.21□□□□□ -0.62
Syne1-202ENSMUST00000095899 Pola1P33609 1465 aa11.2□□□□□ -0.62
Syne1-202ENSMUST00000095899 Abca8aQ8K442 1620 aa11.2□□□□□ -0.62
Syne1-202ENSMUST00000095899 PrkcshO08795 521 aa11.19□□□□□ -0.62
Syne1-202ENSMUST00000095899 Sipa1l1Q8C0T5 1782 aa11.19□□□□□ -0.62
Syne1-202ENSMUST00000095899 Topbp1Q6ZQF0 1515 aa11.18□□□□□ -0.62
Syne1-202ENSMUST00000095899 AnkarA2RT91 1465 aa11.18□□□□□ -0.62
Syne1-202ENSMUST00000095899 Prdm16A2A935 1275 aa11.18□□□□□ -0.62
Syne1-202ENSMUST00000095899 Card11Q8CIS0 1159 aa11.18□□□□□ -0.62
Syne1-202ENSMUST00000095899 Rrp7aQ9D1C9 280 aaKnown RBP11.18□□□□□ -0.62
Syne1-202ENSMUST00000095899 Iqgap3F8VQ29 1632 aa11.18□□□□□ -0.62
Syne1-202ENSMUST00000095899 Abca6Q8K441 1624 aa11.18□□□□□ -0.62
Syne1-202ENSMUST00000095899 Rock2P70336 1388 aa11.17□□□□□ -0.62
Syne1-202ENSMUST00000095899 Hecw2Q6I6G8 1578 aa11.17□□□□□ -0.62
Syne1-202ENSMUST00000095899 Plch2A2AP18 1501 aa11.17□□□□□ -0.62
Syne1-202ENSMUST00000095899 Cdk5rap2Q8K389 1822 aa11.17□□□□□ -0.62
Syne1-202ENSMUST00000095899 Mrs2Q5NCE8 434 aa11.16□□□□□ -0.62
Syne1-202ENSMUST00000095899 Plppr3Q7TPB0 716 aa11.16□□□□□ -0.62
Syne1-202ENSMUST00000095899 Grwd1Q810D6 446 aaKnown RBP11.16□□□□□ -0.62
Syne1-202ENSMUST00000095899 Prex1Q69ZK0 1650 aa11.15□□□□□ -0.62
Syne1-202ENSMUST00000095899 Arid3cA6PWV5 409 aa11.15□□□□□ -0.62
Syne1-202ENSMUST00000095899 Spag9Q58A65 1321 aaKnown RBP11.15□□□□□ -0.62
Syne1-202ENSMUST00000095899 Map3k5O35099 1380 aa11.15□□□□□ -0.62
Syne1-202ENSMUST00000095899 CatipB9EKE5 520 aa11.15□□□□□ -0.63
Syne1-202ENSMUST00000095899 Rtl5Q5DTT4 599 aa11.15□□□□□ -0.63
Syne1-202ENSMUST00000095899 RereQ80TZ9 1558 aa11.14□□□□□ -0.63
Syne1-202ENSMUST00000095899 Ehbp1l1Q99MS7 1716 aa11.14□□□□□ -0.63
Syne1-202ENSMUST00000095899 Pde4cQ3UEI1 686 aa11.14□□□□□ -0.63
Syne1-202ENSMUST00000095899 Ifnlr1Q8CGK5 535 aa11.14□□□□□ -0.63
Syne1-202ENSMUST00000095899 Itsn2Q9Z0R6 1659 aa11.14□□□□□ -0.63
Syne1-202ENSMUST00000095899 Atp10aO54827 1508 aa11.14□□□□□ -0.63
Syne1-202ENSMUST00000095899 Abcc6Q9R1S7 1498 aa11.13□□□□□ -0.63
Syne1-202ENSMUST00000095899 Cep152A2AUM9 1736 aaKnown RBP11.13□□□□□ -0.63
Syne1-202ENSMUST00000095899 Zmym4A2A791 1549 aaKnown RBP11.13□□□□□ -0.63
Syne1-202ENSMUST00000095899 Cdc42bpgQ80UW5 1551 aa11.12□□□□□ -0.63
Syne1-202ENSMUST00000095899 Dip2cE9PWR4 1557 aa11.12□□□□□ -0.63
Syne1-202ENSMUST00000095899 Znf518aB2RRF6 1478 aaKnown RBP11.11□□□□□ -0.63
Syne1-202ENSMUST00000095899 Calr4Q3TQS0 420 aa11.11□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 127.1 ms