RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 Lrrc9Q8CDN9 1456 aa10.72□□□□□ -0.69
Trim40-201ENSMUST00000087158 Znf608Q56A10 1511 aa10.72□□□□□ -0.69
Trim40-201ENSMUST00000087158 Ttll5Q8CHB8 1328 aa10.72□□□□□ -0.69
Trim40-201ENSMUST00000087158 Usp47Q8BY87 1376 aa10.72□□□□□ -0.69
Trim40-201ENSMUST00000087158 Pik3c2gO70167 1506 aa10.71□□□□□ -0.69
Trim40-201ENSMUST00000087158 Supt6hQ62383 1726 aaKnown RBP10.71□□□□□ -0.69
Trim40-201ENSMUST00000087158 Pprc1Q6NZN1 1644 aa10.71□□□□□ -0.69
Trim40-201ENSMUST00000087158 Gm13697A2AK42 830 aa10.7□□□□□ -0.7
Trim40-201ENSMUST00000087158 Cdc42bpbQ7TT50 1713 aa10.7□□□□□ -0.7
Trim40-201ENSMUST00000087158 Rrp7aQ9D1C9 280 aaKnown RBP10.7□□□□□ -0.7
Trim40-201ENSMUST00000087158 Clstn2Q9ER65 966 aa10.7□□□□□ -0.7
Trim40-201ENSMUST00000087158 Prdm16A2A935 1275 aa10.69□□□□□ -0.7
Trim40-201ENSMUST00000087158 Arid3aQ62431 601 aa10.69□□□□□ -0.7
Trim40-201ENSMUST00000087158 Ssh2Q5SW75 1423 aa10.69□□□□□ -0.7
Trim40-201ENSMUST00000087158 Map4P27546 1125 aaKnown RBP10.69□□□□□ -0.7
Trim40-201ENSMUST00000087158 Kidins220E9Q9B7 1793 aa10.68□□□□□ -0.7
Trim40-201ENSMUST00000087158 DroshaQ5HZJ0 1373 aaKnown RBP10.68□□□□□ -0.7
Trim40-201ENSMUST00000087158 ArxO35085 564 aa10.68□□□□□ -0.7
Trim40-201ENSMUST00000087158 Trak1Q6PD31 939 aa10.68□□□□□ -0.7
Trim40-201ENSMUST00000087158 Ppp1r18Q8BQ30 594 aa10.67□□□□□ -0.7
Trim40-201ENSMUST00000087158 Zfyve16Q80U44 1528 aa10.67□□□□□ -0.7
Trim40-201ENSMUST00000087158 Prm3Q62100 101 aa10.67□□□□□ -0.7
Trim40-201ENSMUST00000087158 PtprgQ05909 1442 aa10.66□□□□□ -0.7
Trim40-201ENSMUST00000087158 Dhx9O70133 1380 aaKnown RBP10.65□□□□□ -0.7
Trim40-201ENSMUST00000087158 Bcl11aQ9QYE3 773 aa10.64□□□□□ -0.71
Trim40-201ENSMUST00000087158 Abca9Q8K449 1623 aa10.63□□□□□ -0.71
Trim40-201ENSMUST00000087158 Arid3cA6PWV5 409 aa10.63□□□□□ -0.71
Trim40-201ENSMUST00000087158 Ecm2Q5FW85 670 aa10.63□□□□□ -0.71
Trim40-201ENSMUST00000087158 Taok2Q6ZQ29 1240 aa10.63□□□□□ -0.71
Trim40-201ENSMUST00000087158 Spag9Q58A65 1321 aaKnown RBP10.63□□□□□ -0.71
Trim40-201ENSMUST00000087158 Kif14L0N7N1 1674 aaKnown RBP10.62□□□□□ -0.71
Trim40-201ENSMUST00000087158 Ak9G3UYQ4 1894 aa10.62□□□□□ -0.71
Trim40-201ENSMUST00000087158 Abca17E9PX95 1733 aa10.61□□□□□ -0.71
Trim40-201ENSMUST00000087158 Asxl1P59598 1514 aa10.61□□□□□ -0.71
Trim40-201ENSMUST00000087158 Map3k5O35099 1380 aa10.6□□□□□ -0.71
Trim40-201ENSMUST00000087158 Cd109Q8R422 1442 aa10.6□□□□□ -0.71
Trim40-201ENSMUST00000087158 Chrna2Q91X60 512 aa10.6□□□□□ -0.71
Trim40-201ENSMUST00000087158 Lemd3Q9WU40 921 aa10.6□□□□□ -0.71
Trim40-201ENSMUST00000087158 Robo2Q7TPD3 1470 aa10.59□□□□□ -0.71
Trim40-201ENSMUST00000087158 Kif1bQ60575 1816 aaKnown RBP10.59□□□□□ -0.71
Trim40-201ENSMUST00000087158 Rock1P70335 1354 aa10.58□□□□□ -0.72
Trim40-201ENSMUST00000087158 Dot1lQ6XZL8 1540 aa10.58□□□□□ -0.72
Trim40-201ENSMUST00000087158 Usp54Q8BL06 1588 aaKnown RBP10.58□□□□□ -0.72
Trim40-201ENSMUST00000087158 Rgl3Q3UYI5 709 aa10.58□□□□□ -0.72
Trim40-201ENSMUST00000087158 Zbtb7cQ8VCZ7 619 aa10.58□□□□□ -0.72
Trim40-201ENSMUST00000087158 Nos1Q9Z0J4 1429 aa10.58□□□□□ -0.72
Trim40-201ENSMUST00000087158 Mbd5B1AYB6 1498 aa10.58□□□□□ -0.72
Trim40-201ENSMUST00000087158 ShprhQ7TPQ3 1674 aa10.57□□□□□ -0.72
Trim40-201ENSMUST00000087158 Xrn1P97789 1719 aaKnown RBP10.57□□□□□ -0.72
Trim40-201ENSMUST00000087158 Sin3aQ60520 1274 aaKnown RBP10.56□□□□□ -0.72
Trim40-201ENSMUST00000087158 Atp7aQ64430 1491 aa10.56□□□□□ -0.72
Trim40-201ENSMUST00000087158 Hdac5Q9Z2V6 1113 aa10.55□□□□□ -0.72
Trim40-201ENSMUST00000087158 Myom3A2ABU4 1439 aa10.55□□□□□ -0.72
Trim40-201ENSMUST00000087158 Ppip5k1A2ARP1 1436 aa10.55□□□□□ -0.72
Trim40-201ENSMUST00000087158 Nsd2Q8BVE8 1365 aa10.54□□□□□ -0.72
Trim40-201ENSMUST00000087158 Hnrnpul2Q00PI9 745 aaKnown RBP10.54□□□□□ -0.72
Trim40-201ENSMUST00000087158 OvosQ3UU35 1456 aa10.54□□□□□ -0.72
Trim40-201ENSMUST00000087158 Mug2P28666 1451 aa10.53□□□□□ -0.72
Trim40-201ENSMUST00000087158 Dapk1Q80YE7 1442 aa10.53□□□□□ -0.72
Trim40-201ENSMUST00000087158 Cpsf1Q9EPU4 1441 aaKnown RBP10.53□□□□□ -0.72
Trim40-201ENSMUST00000087158 Myo5cE9Q1F5 1742 aa10.53□□□□□ -0.72
Trim40-201ENSMUST00000087158 Kdm5cP41230 1554 aa10.53□□□□□ -0.72
Trim40-201ENSMUST00000087158 Znf518aB2RRF6 1478 aaKnown RBP10.53□□□□□ -0.72
Trim40-201ENSMUST00000087158 Ncoa1P70365 1447 aa10.53□□□□□ -0.72
Trim40-201ENSMUST00000087158 Tarbp1E9Q368 1579 aa10.52□□□□□ -0.73
Trim40-201ENSMUST00000087158 Atp10aO54827 1508 aa10.52□□□□□ -0.73
Trim40-201ENSMUST00000087158 Iqgap1Q9JKF1 1657 aaKnown RBP10.52□□□□□ -0.73
Trim40-201ENSMUST00000087158 Polr3aB2RXC6 1390 aa10.52□□□□□ -0.73
Trim40-201ENSMUST00000087158 Kif3bQ61771 747 aa10.51□□□□□ -0.73
Trim40-201ENSMUST00000087158 Cwc22Q8C5N3 908 aaKnown RBP10.51□□□□□ -0.73
Trim40-201ENSMUST00000087158 Ylpm1Q9R0I7 1386 aaKnown RBP10.51□□□□□ -0.73
Trim40-201ENSMUST00000087158 AglF8VPN4 1532 aa10.51□□□□□ -0.73
Trim40-201ENSMUST00000087158 Washc2Q6PGL7 1334 aa10.5□□□□□ -0.73
Trim40-201ENSMUST00000087158 Edc4Q3UJB9 1406 aaKnown RBP10.5□□□□□ -0.73
Trim40-201ENSMUST00000087158 Plch2A2AP18 1501 aa10.5□□□□□ -0.73
Trim40-201ENSMUST00000087158 Clasp1Q80TV8 1535 aaKnown RBP10.49□□□□□ -0.73
Trim40-201ENSMUST00000087158 Rundc1Q0VDN7 615 aa10.49□□□□□ -0.73
Trim40-201ENSMUST00000087158 Kiaa0556Q8C753 1610 aa10.49□□□□□ -0.73
Trim40-201ENSMUST00000087158 RalgapbQ8BQZ4 1484 aa10.49□□□□□ -0.73
Trim40-201ENSMUST00000087158 Fndc1E9Q043 1732 aa10.48□□□□□ -0.73
Trim40-201ENSMUST00000087158 Grwd1Q810D6 446 aaKnown RBP10.48□□□□□ -0.73
Trim40-201ENSMUST00000087158 Depdc5P61460 1591 aa10.48□□□□□ -0.73
Trim40-201ENSMUST00000087158 Topbp1Q6ZQF0 1515 aa10.48□□□□□ -0.73
Trim40-201ENSMUST00000087158 Naip6Q9JIB6 1403 aa10.48□□□□□ -0.73
Trim40-201ENSMUST00000087158 Card11Q8CIS0 1159 aa10.48□□□□□ -0.73
Trim40-201ENSMUST00000087158 Cdk13Q69ZA1 1511 aaKnown RBP10.47□□□□□ -0.73
Trim40-201ENSMUST00000087158 Tnnt3Q9QZ47 272 aa10.46□□□□□ -0.73
Trim40-201ENSMUST00000087158 Cdc42bpgQ80UW5 1551 aa10.46□□□□□ -0.73
Trim40-201ENSMUST00000087158 Ttc37F8VPK0 1563 aa10.46□□□□□ -0.74
Trim40-201ENSMUST00000087158 AnkarA2RT91 1465 aa10.46□□□□□ -0.74
Trim40-201ENSMUST00000087158 Tmem131lQ3U3D7 1597 aa10.45□□□□□ -0.74
Trim40-201ENSMUST00000087158 Ptch1Q61115 1434 aa10.45□□□□□ -0.74
Trim40-201ENSMUST00000087158 Abca6Q8K441 1624 aa10.45□□□□□ -0.74
Trim40-201ENSMUST00000087158 Gli2Q0VGT2 1544 aa10.45□□□□□ -0.74
Trim40-201ENSMUST00000087158 Smg6P61406 1418 aaKnown RBP10.45□□□□□ -0.74
Trim40-201ENSMUST00000087158 Plekhg5Q66T02 1073 aa10.45□□□□□ -0.74
Trim40-201ENSMUST00000087158 Rsph4aQ8BYM7 716 aa10.45□□□□□ -0.74
Trim40-201ENSMUST00000087158 AdgbG3UZ78 1657 aa10.45□□□□□ -0.74
Trim40-201ENSMUST00000087158 Ttc21bQ0HA38 1315 aa10.44□□□□□ -0.74
Trim40-201ENSMUST00000087158 Uggt2E9Q4X2 1504 aa10.44□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 37 ms