RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Tpd52l2Q9CYZ2 220 aaKnown RBP12.26□□□□□ -0.45
Upf3b-201ENSMUST00000076265 Top2bQ64511 1612 aa12.25□□□□□ -0.45
Upf3b-201ENSMUST00000076265 Bcl2l13P59017 434 aa12.25□□□□□ -0.45
Upf3b-201ENSMUST00000076265 Ipo8Q7TMY7 1010 aa12.25□□□□□ -0.45
Upf3b-201ENSMUST00000076265 Mkrn1Q9QXP6 481 aa12.25□□□□□ -0.45
Upf3b-201ENSMUST00000076265 Urb2E9Q7L1 1524 aaKnown RBP12.25□□□□□ -0.45
Upf3b-201ENSMUST00000076265 Ccdc18Q640L5 1455 aa12.25□□□□□ -0.45
Upf3b-201ENSMUST00000076265 Ppm1eQ80TL0 749 aa12.25□□□□□ -0.45
Upf3b-201ENSMUST00000076265 Kcnv2Q8CFS6 562 aa12.25□□□□□ -0.45
Upf3b-201ENSMUST00000076265 LrpprcQ6PB66 1392 aaKnown RBP12.24□□□□□ -0.45
Upf3b-201ENSMUST00000076265 Eif4g3Q80XI3 1579 aaKnown RBP12.24□□□□□ -0.45
Upf3b-201ENSMUST00000076265 Map4k4P97820 1233 aaKnown RBP12.24□□□□□ -0.45
Upf3b-201ENSMUST00000076265 Spock2Q9ER58 423 aa12.24□□□□□ -0.45
Upf3b-201ENSMUST00000076265 Plb1Q3TTY0 1478 aa12.24□□□□□ -0.45
Upf3b-201ENSMUST00000076265 Cngb1E1AZ71 1325 aa12.24□□□□□ -0.45
Upf3b-201ENSMUST00000076265 Mettl14Q3UIK4 456 aa12.23□□□□□ -0.45
Upf3b-201ENSMUST00000076265 Apba2P98084 750 aa12.22□□□□□ -0.45
Upf3b-201ENSMUST00000076265 Znf330Q922H9 316 aa12.22□□□□□ -0.45
Upf3b-201ENSMUST00000076265 Lemd3Q9WU40 921 aa12.22□□□□□ -0.45
Upf3b-201ENSMUST00000076265 Chrna2Q91X60 512 aa12.22□□□□□ -0.45
Upf3b-201ENSMUST00000076265 Speer4f1Q9D5Q6 258 aa12.21□□□□□ -0.45
Upf3b-201ENSMUST00000076265 Aebp2Q9Z248 504 aaKnown RBP12.21□□□□□ -0.45
Upf3b-201ENSMUST00000076265 Rgl2Q61193 778 aa12.21□□□□□ -0.46
Upf3b-201ENSMUST00000076265 Camsap1A2AHC3 1581 aa12.19□□□□□ -0.46
Upf3b-201ENSMUST00000076265 Gpbp1l1Q6NZP2 473 aa12.19□□□□□ -0.46
Upf3b-201ENSMUST00000076265 Lmod2Q3UHZ5 550 aa12.18□□□□□ -0.46
Upf3b-201ENSMUST00000076265 Rtl5Q5DTT4 599 aa12.18□□□□□ -0.46
Upf3b-201ENSMUST00000076265 Ankib1Q6ZPS6 1085 aa12.18□□□□□ -0.46
Upf3b-201ENSMUST00000076265 Znf622Q91VY9 476 aa12.17□□□□□ -0.46
Upf3b-201ENSMUST00000076265 Shroom2A2ALU4 1481 aa12.17□□□□□ -0.46
Upf3b-201ENSMUST00000076265 Speer4f2E9Q366 295 aa12.17□□□□□ -0.46
Upf3b-201ENSMUST00000076265 Trap1aP19473 224 aa12.16□□□□□ -0.46
Upf3b-201ENSMUST00000076265 Stra8P70278 393 aa12.16□□□□□ -0.46
Upf3b-201ENSMUST00000076265 Gimap6Q8K349 305 aa12.16□□□□□ -0.46
Upf3b-201ENSMUST00000076265 Rnf216P58283 853 aa12.15□□□□□ -0.46
Upf3b-201ENSMUST00000076265 Crocc2F6XLV1 1638 aa12.15□□□□□ -0.46
Upf3b-201ENSMUST00000076265 PogzQ8BZH4 1409 aaKnown RBP12.15□□□□□ -0.46
Upf3b-201ENSMUST00000076265 FosbP13346 338 aa12.15□□□□□ -0.46
Upf3b-201ENSMUST00000076265 Wdhd1P59328 1117 aa12.15□□□□□ -0.46
Upf3b-201ENSMUST00000076265 Cluap1Q8R3P7 413 aa12.15□□□□□ -0.46
Upf3b-201ENSMUST00000076265 Fmn1Q05860 1466 aa12.14□□□□□ -0.47
Upf3b-201ENSMUST00000076265 Ralbp1Q62172 648 aa12.14□□□□□ -0.47
Upf3b-201ENSMUST00000076265 Ms4a5Q810P8 197 aa12.13□□□□□ -0.47
Upf3b-201ENSMUST00000076265 Hsp90aa1P07901 733 aaKnown RBP12.12□□□□□ -0.47
Upf3b-201ENSMUST00000076265 SelenooQ9DBC0 667 aa12.12□□□□□ -0.47
Upf3b-201ENSMUST00000076265 Gm10354K7N6A0 256 aa12.11□□□□□ -0.47
Upf3b-201ENSMUST00000076265 Rhbdl3P58873 404 aa12.1□□□□□ -0.47
Upf3b-201ENSMUST00000076265 Usp35M0QWN7 1009 aa12.1□□□□□ -0.47
Upf3b-201ENSMUST00000076265 Fam43aQ8BUP8 424 aa12.1□□□□□ -0.47
Upf3b-201ENSMUST00000076265 Ssr1Q9CY50 286 aaKnown RBP12.1□□□□□ -0.47
Upf3b-201ENSMUST00000076265 Ift140E9PY46 1464 aa12.1□□□□□ -0.47
Upf3b-201ENSMUST00000076265 Duox2A2AQ99 1517 aa12.09□□□□□ -0.47
Upf3b-201ENSMUST00000076265 Dnajc2P54103 621 aaKnown RBP12.09□□□□□ -0.47
Upf3b-201ENSMUST00000076265 Arhgef1Q61210 920 aaKnown RBP12.09□□□□□ -0.47
Upf3b-201ENSMUST00000076265 Zfyve19Q9DAZ9 389 aa12.09□□□□□ -0.47
Upf3b-201ENSMUST00000076265 Pabpn1Q8CCS6 302 aaKnown RBP12.08□□□□□ -0.48
Upf3b-201ENSMUST00000076265 Safb2Q80YR5 991 aaKnown RBP12.08□□□□□ -0.48
Upf3b-201ENSMUST00000076265 Dnttip2Q8R2M2 758 aaKnown RBP12.08□□□□□ -0.48
Upf3b-201ENSMUST00000076265 Kcnn1Q9EQR3 537 aa12.07□□□□□ -0.48
Upf3b-201ENSMUST00000076265 NbnQ9R207 751 aa12.07□□□□□ -0.48
Upf3b-201ENSMUST00000076265 Ferd3lQ923Z4 168 aa12.06□□□□□ -0.48
Upf3b-201ENSMUST00000076265 Irf6P97431 467 aa12.06□□□□□ -0.48
Upf3b-201ENSMUST00000076265 Grin2bQ01097 1482 aa12.05□□□□□ -0.48
Upf3b-201ENSMUST00000076265 Frmd4bQ920B0 1035 aa12.05□□□□□ -0.48
Upf3b-201ENSMUST00000076265 Vps37dQ810I0 261 aa12.04□□□□□ -0.48
Upf3b-201ENSMUST00000076265 NptxrQ99J85 493 aa12.04□□□□□ -0.48
Upf3b-201ENSMUST00000076265 Col17a1Q07563 1470 aa12.04□□□□□ -0.48
Upf3b-201ENSMUST00000076265 Disp1Q3TDN0 1521 aa12.04□□□□□ -0.48
Upf3b-201ENSMUST00000076265 Rusc2Q80U22 1514 aa12.04□□□□□ -0.48
Upf3b-201ENSMUST00000076265 Ppp1r37Q8BKR5 712 aa12.04□□□□□ -0.48
Upf3b-201ENSMUST00000076265 Mmp14P53690 582 aa12.03□□□□□ -0.48
Upf3b-201ENSMUST00000076265 Stk3Q9JI10 497 aa12.02□□□□□ -0.49
Upf3b-201ENSMUST00000076265 Efcab5A0JP43 1406 aa12□□□□□ -0.49
Upf3b-201ENSMUST00000076265 Tmc1Q8R4P5 757 aa12□□□□□ -0.49
Upf3b-201ENSMUST00000076265 Pax3P24610 479 aa11.99□□□□□ -0.49
Upf3b-201ENSMUST00000076265 Pmm1O35621 262 aa11.99□□□□□ -0.49
Upf3b-201ENSMUST00000076265 4930519G04RikQ9CPT7 205 aa11.98□□□□□ -0.49
Upf3b-201ENSMUST00000076265 PnisrA2AJT4 805 aaKnown RBP11.98□□□□□ -0.49
Upf3b-201ENSMUST00000076265 Gm7361D3Z6R1 267 aa11.98□□□□□ -0.49
Upf3b-201ENSMUST00000076265 Snd1Q78PY7 910 aaKnown RBP11.98□□□□□ -0.49
Upf3b-201ENSMUST00000076265 Snrnp27Q8K194 155 aa11.98□□□□□ -0.49
Upf3b-201ENSMUST00000076265 Ctage5Q8R311 779 aa11.98□□□□□ -0.49
Upf3b-201ENSMUST00000076265 DmtnQ9WV69 405 aa11.98□□□□□ -0.49
Upf3b-201ENSMUST00000076265 Nup160Q9Z0W3 1402 aaKnown RBP11.97□□□□□ -0.49
Upf3b-201ENSMUST00000076265 Speer4eK7N6S8 255 aa11.97□□□□□ -0.49
Upf3b-201ENSMUST00000076265 Ano8Q6PB70 1060 aa11.97□□□□□ -0.49
Upf3b-201ENSMUST00000076265 Dixdc1Q80Y83 711 aa11.97□□□□□ -0.49
Upf3b-201ENSMUST00000076265 AdnpQ9Z103 1108 aaKnown RBP11.97□□□□□ -0.49
Upf3b-201ENSMUST00000076265 Ivns1abpQ920Q8 642 aa11.97□□□□□ -0.49
Upf3b-201ENSMUST00000076265 Ccdc88bQ4QRL3 1481 aa11.96□□□□□ -0.49
Upf3b-201ENSMUST00000076265 Samd9lQ69Z37 1561 aa11.96□□□□□ -0.49
Upf3b-201ENSMUST00000076265 Il16O54824 1322 aa11.96□□□□□ -0.5
Upf3b-201ENSMUST00000076265 Cc2d2bA0A286YDU8 1405 aa11.95□□□□□ -0.5
Upf3b-201ENSMUST00000076265 Setd1bQ8CFT2 1985 aa11.95□□□□□ -0.5
Upf3b-201ENSMUST00000076265 Kcna1P16388 495 aa11.94□□□□□ -0.5
Upf3b-201ENSMUST00000076265 Nap1l5Q9JJF0 156 aa11.94□□□□□ -0.5
Upf3b-201ENSMUST00000076265 Rbm46P86049 533 aa11.94□□□□□ -0.5
Upf3b-201ENSMUST00000076265 Tagap1P0CAX8 505 aa11.93□□□□□ -0.5
Upf3b-201ENSMUST00000076265 Rnf25Q9QZR0 456 aa11.93□□□□□ -0.5
Upf3b-201ENSMUST00000076265 Rad54l2Q99NG0 1466 aa11.93□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 50.5 ms