RNA–Protein interactions for RNA: ENSMUST00000056925.15

Col6a3-201, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 10,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-201ENSMUST00000056925 Tpm4Q6IRU2 248 aa12.72□□□□□ -0.37
Col6a3-201ENSMUST00000056925 Ak7Q9D2H2 614 aa12.72□□□□□ -0.37
Col6a3-201ENSMUST00000056925 Cdkn1cP49919 348 aa12.72□□□□□ -0.37
Col6a3-201ENSMUST00000056925 Zscan21Q07231 555 aa12.71□□□□□ -0.37
Col6a3-201ENSMUST00000056925 Dusp27Q148W8 1138 aa12.71□□□□□ -0.37
Col6a3-201ENSMUST00000056925 Exoc6Q8R313 802 aa12.71□□□□□ -0.37
Col6a3-201ENSMUST00000056925 Mical1Q8VDP3 1048 aa12.71□□□□□ -0.38
Col6a3-201ENSMUST00000056925 MecomP14404 1042 aa12.7□□□□□ -0.38
Col6a3-201ENSMUST00000056925 Paxip1Q6NZQ4 1056 aa12.7□□□□□ -0.38
Col6a3-201ENSMUST00000056925 Cluap1Q8R3P7 413 aa12.7□□□□□ -0.38
Col6a3-201ENSMUST00000056925 Tmf1B9EKI3 1091 aa12.7□□□□□ -0.38
Col6a3-201ENSMUST00000056925 Ccar1Q8CH18 1146 aaKnown RBP12.7□□□□□ -0.38
Col6a3-201ENSMUST00000056925 Gm20521D3Z5F7 333 aa12.7□□□□□ -0.38
Col6a3-201ENSMUST00000056925 Plppr3Q7TPB0 716 aa12.7□□□□□ -0.38
Col6a3-201ENSMUST00000056925 Rsph6aQ8CDR2 708 aa12.7□□□□□ -0.38
Col6a3-201ENSMUST00000056925 Stag3O70576 1240 aa12.69□□□□□ -0.38
Col6a3-201ENSMUST00000056925 OptnQ8K3K8 584 aa12.69□□□□□ -0.38
Col6a3-201ENSMUST00000056925 Dnai2A2AC93 623 aa12.69□□□□□ -0.38
Col6a3-201ENSMUST00000056925 Filip1lQ6P6L0 1131 aa12.69□□□□□ -0.38
Col6a3-201ENSMUST00000056925 NaspQ99MD9 773 aaKnown RBP12.69□□□□□ -0.38
Col6a3-201ENSMUST00000056925 Ipo7Q9EPL8 1038 aaKnown RBP12.68□□□□□ -0.38
Col6a3-201ENSMUST00000056925 Ubap1lG3UW59 384 aa12.68□□□□□ -0.38
Col6a3-201ENSMUST00000056925 Casq1O09165 405 aa12.67□□□□□ -0.38
Col6a3-201ENSMUST00000056925 Prm3Q62100 101 aa12.67□□□□□ -0.38
Col6a3-201ENSMUST00000056925 Safb2Q80YR5 991 aaKnown RBP12.67□□□□□ -0.38
Col6a3-201ENSMUST00000056925 Tmco5bQ80X59 307 aa12.66□□□□□ -0.38
Col6a3-201ENSMUST00000056925 A0A0U1RNP2 1173 aa12.66□□□□□ -0.38
Col6a3-201ENSMUST00000056925 Kif3cO35066 796 aa12.66□□□□□ -0.38
Col6a3-201ENSMUST00000056925 Nap1l3Q794H2 544 aa12.65□□□□□ -0.38
Col6a3-201ENSMUST00000056925 Hspa5P20029 655 aaKnown RBP12.65□□□□□ -0.38
Col6a3-201ENSMUST00000056925 Kif20aP97329 887 aa12.65□□□□□ -0.38
Col6a3-201ENSMUST00000056925 Sh3bgrQ9WUZ7 214 aa12.65□□□□□ -0.38
Col6a3-201ENSMUST00000056925 Gabpb2P81069 414 aa12.65□□□□□ -0.38
Col6a3-201ENSMUST00000056925 U2surpQ6NV83 1029 aaKnown RBP12.65□□□□□ -0.39
Col6a3-201ENSMUST00000056925 Tnnt1O88346 262 aa12.64□□□□□ -0.39
Col6a3-201ENSMUST00000056925 Eif2s2Q99L45 331 aaKnown RBP12.64□□□□□ -0.39
Col6a3-201ENSMUST00000056925 Golga2Q921M4 999 aa12.64□□□□□ -0.39
Col6a3-201ENSMUST00000056925 Hap1O35668 628 aa12.63□□□□□ -0.39
Col6a3-201ENSMUST00000056925 Rfx1P48377 963 aa12.63□□□□□ -0.39
Col6a3-201ENSMUST00000056925 Cep112Q5PR68 954 aa12.63□□□□□ -0.39
Col6a3-201ENSMUST00000056925 Cnga1P29974 684 aa12.62□□□□□ -0.39
Col6a3-201ENSMUST00000056925 Ccdc83Q9D4V3 305 aa12.62□□□□□ -0.39
Col6a3-201ENSMUST00000056925 Rtf1A2AQ19 715 aaKnown RBP12.62□□□□□ -0.39
Col6a3-201ENSMUST00000056925 PdiltQ9DAN1 588 aa12.62□□□□□ -0.39
Col6a3-201ENSMUST00000056925 Cgnl1Q6AW69 1298 aa12.62□□□□□ -0.39
Col6a3-201ENSMUST00000056925 Anapc15-psA0A140T8L6 141 aa12.61□□□□□ -0.39
Col6a3-201ENSMUST00000056925 Brpf1B2RRD7 1212 aa12.61□□□□□ -0.39
Col6a3-201ENSMUST00000056925 Znf330Q922H9 316 aa12.61□□□□□ -0.39
Col6a3-201ENSMUST00000056925 Arglu1Q3UL36 271 aaKnown RBP12.61□□□□□ -0.39
Col6a3-201ENSMUST00000056925 Map3k7clP58500 142 aa12.6□□□□□ -0.39
Col6a3-201ENSMUST00000056925 Rabep1O35551 862 aa12.6□□□□□ -0.39
Col6a3-201ENSMUST00000056925 Pdia4P08003 638 aaKnown RBP12.6□□□□□ -0.39
Col6a3-201ENSMUST00000056925 Eif4g2Q62448 906 aaKnown RBP12.6□□□□□ -0.39
Col6a3-201ENSMUST00000056925 Golga3P55937 1487 aa12.59□□□□□ -0.39
Col6a3-201ENSMUST00000056925 Zhx1P70121 873 aa12.59□□□□□ -0.39
Col6a3-201ENSMUST00000056925 Isy1Q69ZQ2 285 aaKnown RBP12.59□□□□□ -0.39
Col6a3-201ENSMUST00000056925 HmmrQ00547 794 aaKnown RBP12.59□□□□□ -0.39
Col6a3-201ENSMUST00000056925 Fez1Q8K0X8 392 aa12.59□□□□□ -0.39
Col6a3-201ENSMUST00000056925 Ccar2Q8VDP4 922 aaKnown RBP12.58□□□□□ -0.39
Col6a3-201ENSMUST00000056925 Ccdc47Q9D024 483 aaKnown RBP12.58□□□□□ -0.39
Col6a3-201ENSMUST00000056925 Rundc1Q0VDN7 615 aa12.58□□□□□ -0.4
Col6a3-201ENSMUST00000056925 Nol10Q5RJG1 687 aaKnown RBP12.58□□□□□ -0.4
Col6a3-201ENSMUST00000056925 A0A1L1SQF0 893 aa12.58□□□□□ -0.4
Col6a3-201ENSMUST00000056925 Tmem132aQ922P8 1018 aa12.58□□□□□ -0.4
Col6a3-201ENSMUST00000056925 Smg6P61406 1418 aaKnown RBP12.58□□□□□ -0.4
Col6a3-201ENSMUST00000056925 Polr3gQ6NXY9 223 aa12.57□□□□□ -0.4
Col6a3-201ENSMUST00000056925 U2af1Q9D883 239 aaKnown RBP12.57□□□□□ -0.4
Col6a3-201ENSMUST00000056925 Gbp4Q61107 620 aa12.57□□□□□ -0.4
Col6a3-201ENSMUST00000056925 Dydc1Q9D9T0 175 aa12.57□□□□□ -0.4
Col6a3-201ENSMUST00000056925 CrbnQ8C7D2 445 aa12.57□□□□□ -0.4
Col6a3-201ENSMUST00000056925 Pmfbp1Q9WVQ0 1022 aa12.56□□□□□ -0.4
Col6a3-201ENSMUST00000056925 KinQ8K339 391 aa12.56□□□□□ -0.4
Col6a3-201ENSMUST00000056925 Gpatch3Q8BIY1 525 aa12.56□□□□□ -0.4
Col6a3-201ENSMUST00000056925 Kif16bB1AVY7 1312 aa12.56□□□□□ -0.4
Col6a3-201ENSMUST00000056925 Bicd2Q921C5 820 aa12.55□□□□□ -0.4
Col6a3-201ENSMUST00000056925 Znf692Q3U381 531 aa12.55□□□□□ -0.4
Col6a3-201ENSMUST00000056925 NgefQ8CHT1 710 aa12.55□□□□□ -0.4
Col6a3-201ENSMUST00000056925 Srek1Q8BZX4 494 aaKnown RBP12.55□□□□□ -0.4
Col6a3-201ENSMUST00000056925 Spag9Q58A65 1321 aaKnown RBP12.54□□□□□ -0.4
Col6a3-201ENSMUST00000056925 Hook1Q8BIL5 728 aa12.54□□□□□ -0.4
Col6a3-201ENSMUST00000056925 Ksr2Q3UVC0 959 aa12.54□□□□□ -0.4
Col6a3-201ENSMUST00000056925 Rnf214Q8BFU3 668 aaKnown RBP12.54□□□□□ -0.4
Col6a3-201ENSMUST00000056925 Gm21969J3QJZ1 289 aa12.53□□□□□ -0.4
Col6a3-201ENSMUST00000056925 Kif7B7ZNG0 1348 aa12.53□□□□□ -0.4
Col6a3-201ENSMUST00000056925 Spag5Q7TME2 1165 aa12.53□□□□□ -0.4
Col6a3-201ENSMUST00000056925 Rec8Q8C5S7 591 aa12.53□□□□□ -0.4
Col6a3-201ENSMUST00000056925 Ccdc146E9Q9F7 977 aa12.52□□□□□ -0.4
Col6a3-201ENSMUST00000056925 CastP51125 788 aa12.52□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Nop14Q8R3N1 860 aaKnown RBP12.52□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Arhgap35Q91YM2 1499 aa12.52□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Fyco1Q8VDC1 1437 aa12.52□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Gm42641I6L9G2 585 aa12.51□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Cbx1P83917 185 aaKnown RBP12.51□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Q3TQI7 289 aaKnown RBP12.51□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Ppm1eQ80TL0 749 aa12.51□□□□□ -0.41
Col6a3-201ENSMUST00000056925 AtripQ8BMG1 785 aa12.51□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Slc4a1apE9PX68 744 aa12.51□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Tmco3Q8BH01 678 aa12.51□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Rnf20Q5DTM8 973 aa12.51□□□□□ -0.41
Col6a3-201ENSMUST00000056925 Ccdc18Q640L5 1455 aa12.51□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 56.2 ms