RNA–Protein interactions for RNA: ENSMUST00000055506.8

Gtf3c1-201, Transcript of General transcription factor 3C polypeptide 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Gtf3c1, Length 6,961 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c1-201ENSMUST00000055506 Hdgfl1Q2VPR5 283 aa13.71□□□□□ -0.21
Gtf3c1-201ENSMUST00000055506 Rnf214Q8BFU3 668 aaKnown RBP13.71□□□□□ -0.21
Gtf3c1-201ENSMUST00000055506 Gabpb2P81069 414 aa13.71□□□□□ -0.21
Gtf3c1-201ENSMUST00000055506 Cc2d1aQ8K1A6 943 aa13.71□□□□□ -0.21
Gtf3c1-201ENSMUST00000055506 Znf704Q9ERQ3 566 aa13.71□□□□□ -0.21
Gtf3c1-201ENSMUST00000055506 Sh3bgrQ9WUZ7 214 aa13.71□□□□□ -0.21
Gtf3c1-201ENSMUST00000055506 Smarce1O54941 411 aaKnown RBP13.7□□□□□ -0.22
Gtf3c1-201ENSMUST00000055506 Ercc6F8VPZ5 1481 aa13.7□□□□□ -0.22
Gtf3c1-201ENSMUST00000055506 Ifit1bl1D3Z6F0 470 aa13.69□□□□□ -0.22
Gtf3c1-201ENSMUST00000055506 Znf526Q8BI66 675 aa13.69□□□□□ -0.22
Gtf3c1-201ENSMUST00000055506 Ccar1Q8CH18 1146 aaKnown RBP13.69□□□□□ -0.22
Gtf3c1-201ENSMUST00000055506 Pdcl3Q8BVF2 240 aa13.69□□□□□ -0.22
Gtf3c1-201ENSMUST00000055506 Mre11Q61216 706 aa13.69□□□□□ -0.22
Gtf3c1-201ENSMUST00000055506 Stk11ipQ3TAA7 1072 aa13.68□□□□□ -0.22
Gtf3c1-201ENSMUST00000055506 Ak7Q9D2H2 614 aa13.67□□□□□ -0.22
Gtf3c1-201ENSMUST00000055506 Casq1O09165 405 aa13.67□□□□□ -0.22
Gtf3c1-201ENSMUST00000055506 Slc4a10Q5DTL9 1118 aa13.67□□□□□ -0.22
Gtf3c1-201ENSMUST00000055506 Arhgap27A2AB59 869 aa13.67□□□□□ -0.22
Gtf3c1-201ENSMUST00000055506 MlecQ6ZQI3 291 aaKnown RBP13.67□□□□□ -0.22
Gtf3c1-201ENSMUST00000055506 Ccdc34Q3UI66 367 aa13.66□□□□□ -0.22
Gtf3c1-201ENSMUST00000055506 Ralbp1Q62172 648 aa13.66□□□□□ -0.22
Gtf3c1-201ENSMUST00000055506 Anp32eP97822 260 aaKnown RBP13.66□□□□□ -0.22
Gtf3c1-201ENSMUST00000055506 Nol10Q5RJG1 687 aaKnown RBP13.66□□□□□ -0.22
Gtf3c1-201ENSMUST00000055506 Nap1l3Q794H2 544 aa13.65□□□□□ -0.22
Gtf3c1-201ENSMUST00000055506 Pak3Q61036 559 aa13.65□□□□□ -0.22
Gtf3c1-201ENSMUST00000055506 Filip1lQ6P6L0 1131 aa13.65□□□□□ -0.22
Gtf3c1-201ENSMUST00000055506 Phactr2B1AVP0 632 aa13.64□□□□□ -0.23
Gtf3c1-201ENSMUST00000055506 Tmf1B9EKI3 1091 aa13.64□□□□□ -0.23
Gtf3c1-201ENSMUST00000055506 Pkd2O35245 966 aa13.64□□□□□ -0.23
Gtf3c1-201ENSMUST00000055506 Krt82Q99M74 516 aa13.64□□□□□ -0.23
Gtf3c1-201ENSMUST00000055506 Sox12Q04890 314 aa13.64□□□□□ -0.23
Gtf3c1-201ENSMUST00000055506 St18Q80TY4 1045 aa13.64□□□□□ -0.23
Gtf3c1-201ENSMUST00000055506 Ylpm1Q9R0I7 1386 aaKnown RBP13.64□□□□□ -0.23
Gtf3c1-201ENSMUST00000055506 Bicd2Q921C5 820 aa13.63□□□□□ -0.23
Gtf3c1-201ENSMUST00000055506 Gripap1Q8VD04 806 aa13.63□□□□□ -0.23
Gtf3c1-201ENSMUST00000055506 Fhad1A6PWD2 1420 aa13.63□□□□□ -0.23
Gtf3c1-201ENSMUST00000055506 Rufy1Q8BIJ7 712 aa13.62□□□□□ -0.23
Gtf3c1-201ENSMUST00000055506 Mtus2Q3UHD3 1353 aa13.62□□□□□ -0.23
Gtf3c1-201ENSMUST00000055506 PogkQ80TC5 607 aa13.61□□□□□ -0.23
Gtf3c1-201ENSMUST00000055506 Atp6v1dP57746 247 aa13.61□□□□□ -0.23
Gtf3c1-201ENSMUST00000055506 Tpm1P58771 284 aa13.61□□□□□ -0.23
Gtf3c1-201ENSMUST00000055506 Frmd3Q8BHD4 595 aa13.61□□□□□ -0.23
Gtf3c1-201ENSMUST00000055506 Hnrnpul1Q8VDM6 859 aaKnown RBP13.61□□□□□ -0.23
Gtf3c1-201ENSMUST00000055506 Kri1Q8VDQ9 704 aaKnown RBP13.61□□□□□ -0.23
Gtf3c1-201ENSMUST00000055506 Kif4P33174 1231 aa13.61□□□□□ -0.23
Gtf3c1-201ENSMUST00000055506 Znhit6Q3UFB2 460 aaKnown RBP13.61□□□□□ -0.23
Gtf3c1-201ENSMUST00000055506 Mad1l1Q9WTX8 717 aaKnown RBP13.6□□□□□ -0.23
Gtf3c1-201ENSMUST00000055506 Eea1Q8BL66 1411 aa13.6□□□□□ -0.23
Gtf3c1-201ENSMUST00000055506 Mia2Q91ZV0 1396 aa13.6□□□□□ -0.23
Gtf3c1-201ENSMUST00000055506 Babam1Q3UI43 333 aa13.59□□□□□ -0.23
Gtf3c1-201ENSMUST00000055506 Gm21969J3QJZ1 289 aa13.59□□□□□ -0.23
Gtf3c1-201ENSMUST00000055506 SrrtQ99MR6 875 aaKnown RBP13.59□□□□□ -0.23
Gtf3c1-201ENSMUST00000055506 Rbm25B2RY56 838 aaKnown RBP13.58□□□□□ -0.23
Gtf3c1-201ENSMUST00000055506 Zrsr2Q62377 462 aaKnown RBP13.58□□□□□ -0.23
Gtf3c1-201ENSMUST00000055506 Gtf2e1Q9D0D5 440 aa13.58□□□□□ -0.24
Gtf3c1-201ENSMUST00000055506 Rb1cc1Q9ESK9 1588 aa13.57□□□□□ -0.24
Gtf3c1-201ENSMUST00000055506 Pde3bQ61409 1100 aa13.57□□□□□ -0.24
Gtf3c1-201ENSMUST00000055506 Stard8Q8K031 1019 aa13.57□□□□□ -0.24
Gtf3c1-201ENSMUST00000055506 Nap1l1P28656 391 aaKnown RBP13.57□□□□□ -0.24
Gtf3c1-201ENSMUST00000055506 Dusp9Q7TNL7 452 aa13.57□□□□□ -0.24
Gtf3c1-201ENSMUST00000055506 CntlnA2AM05 1397 aa13.56□□□□□ -0.24
Gtf3c1-201ENSMUST00000055506 KarsQ99MN1 595 aaKnown RBP13.56□□□□□ -0.24
Gtf3c1-201ENSMUST00000055506 Tpm4Q6IRU2 248 aa13.56□□□□□ -0.24
Gtf3c1-201ENSMUST00000055506 Eif4g2Q62448 906 aaKnown RBP13.55□□□□□ -0.24
Gtf3c1-201ENSMUST00000055506 Mrvi1Q9WUX5 899 aaKnown RBP13.55□□□□□ -0.24
Gtf3c1-201ENSMUST00000055506 Dnai2A2AC93 623 aa13.54□□□□□ -0.24
Gtf3c1-201ENSMUST00000055506 Fmnl2A2APV2 1086 aa13.54□□□□□ -0.24
Gtf3c1-201ENSMUST00000055506 Ccdc60Q8C4J0 545 aa13.54□□□□□ -0.24
Gtf3c1-201ENSMUST00000055506 Trak1Q6PD31 939 aa13.54□□□□□ -0.24
Gtf3c1-201ENSMUST00000055506 Tpm2P58774 284 aa13.54□□□□□ -0.24
Gtf3c1-201ENSMUST00000055506 Usp48Q3V0C5 1052 aa13.54□□□□□ -0.24
Gtf3c1-201ENSMUST00000055506 Rec8Q8C5S7 591 aa13.54□□□□□ -0.24
Gtf3c1-201ENSMUST00000055506 Ccar2Q8VDP4 922 aaKnown RBP13.54□□□□□ -0.24
Gtf3c1-201ENSMUST00000055506 Trim30cD3YVI9 513 aa13.53□□□□□ -0.24
Gtf3c1-201ENSMUST00000055506 Map4P27546 1125 aaKnown RBP13.53□□□□□ -0.24
Gtf3c1-201ENSMUST00000055506 Paxip1Q6NZQ4 1056 aa13.53□□□□□ -0.24
Gtf3c1-201ENSMUST00000055506 Fam43aQ8BUP8 424 aa13.53□□□□□ -0.24
Gtf3c1-201ENSMUST00000055506 AppP12023 770 aa13.53□□□□□ -0.24
Gtf3c1-201ENSMUST00000055506 Rrp9Q91WM3 475 aaKnown RBP13.52□□□□□ -0.24
Gtf3c1-201ENSMUST00000055506 Cwc15Q9JHS9 229 aaKnown RBP13.52□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 Nutm1Q8BHP2 1126 aa13.51□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 Spag9Q58A65 1321 aaKnown RBP13.51□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 Ccdc43Q9CR29 222 aaKnown RBP13.51□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 Gcom1E9PZ54 550 aa13.5□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 MyzapQ3UIJ9 466 aa13.5□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 Kif15Q6P9L6 1387 aa13.5□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 Ccdc96Q9CR92 584 aa13.5□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 Secisbp2lQ6A098 1086 aaKnown RBP13.49□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 Smc3Q9CW03 1217 aaKnown RBP13.49□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 Ipo7Q9EPL8 1038 aaKnown RBP13.49□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 Triml2E9PW10 424 aa13.49□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 Mns1Q61884 491 aa13.49□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 Ggt6Q6PDE7 497 aa13.49□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 Cplx1P63040 134 aa13.48□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 Sycp1Q62209 993 aa13.48□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 Rabep1O35551 862 aa13.48□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 CalrP14211 416 aaKnown RBP13.48□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 Hook1Q8BIL5 728 aa13.48□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 Kcnh8P59111 1102 aa13.48□□□□□ -0.25
Gtf3c1-201ENSMUST00000055506 Def6Q8C2K1 630 aa13.48□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms