RNA–Protein interactions for RNA: ENSMUST00000048565.8

Trim60-201, Transcript of Tripartite motif-containing protein 60, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim60, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60-201ENSMUST00000048565 AI481877A2ALV5 1481 aa10.28□□□□□ -0.76
Trim60-201ENSMUST00000048565 Rrp7aQ9D1C9 280 aaKnown RBP10.28□□□□□ -0.76
Trim60-201ENSMUST00000048565 Xrn1P97789 1719 aaKnown RBP10.28□□□□□ -0.76
Trim60-201ENSMUST00000048565 Dapk1Q80YE7 1442 aa10.28□□□□□ -0.76
Trim60-201ENSMUST00000048565 Naip6Q9JIB6 1403 aa10.28□□□□□ -0.76
Trim60-201ENSMUST00000048565 Abca17E9PX95 1733 aa10.27□□□□□ -0.76
Trim60-201ENSMUST00000048565 Myom3A2ABU4 1439 aa10.27□□□□□ -0.77
Trim60-201ENSMUST00000048565 Robo2Q7TPD3 1470 aa10.27□□□□□ -0.77
Trim60-201ENSMUST00000048565 Hs6st3Q9QYK4 470 aa10.27□□□□□ -0.77
Trim60-201ENSMUST00000048565 PtprtQ99M80 1454 aa10.26□□□□□ -0.77
Trim60-201ENSMUST00000048565 Atp7aQ64430 1491 aa10.26□□□□□ -0.77
Trim60-201ENSMUST00000048565 RalgapbQ8BQZ4 1484 aa10.26□□□□□ -0.77
Trim60-201ENSMUST00000048565 Znf219Q6IQX8 726 aa10.26□□□□□ -0.77
Trim60-201ENSMUST00000048565 Cd109Q8R422 1442 aa10.26□□□□□ -0.77
Trim60-201ENSMUST00000048565 Usp54Q8BL06 1588 aaKnown RBP10.26□□□□□ -0.77
Trim60-201ENSMUST00000048565 Abca9Q8K449 1623 aa10.25□□□□□ -0.77
Trim60-201ENSMUST00000048565 Rock1P70335 1354 aa10.25□□□□□ -0.77
Trim60-201ENSMUST00000048565 1700123L14RikQ3V2K7 440 aa10.25□□□□□ -0.77
Trim60-201ENSMUST00000048565 Ythdc2B2RR83 1445 aaKnown RBP10.25□□□□□ -0.77
Trim60-201ENSMUST00000048565 Cpsf1Q9EPU4 1441 aaKnown RBP10.25□□□□□ -0.77
Trim60-201ENSMUST00000048565 Tarbp1E9Q368 1579 aa10.25□□□□□ -0.77
Trim60-201ENSMUST00000048565 Zfyve16Q80U44 1528 aa10.25□□□□□ -0.77
Trim60-201ENSMUST00000048565 ShprhQ7TPQ3 1674 aa10.25□□□□□ -0.77
Trim60-201ENSMUST00000048565 Cep170Q6A065 1588 aa10.24□□□□□ -0.77
Trim60-201ENSMUST00000048565 Znf710Q3U288 666 aa10.23□□□□□ -0.77
Trim60-201ENSMUST00000048565 Zbtb7cQ8VCZ7 619 aa10.23□□□□□ -0.77
Trim60-201ENSMUST00000048565 Igf1rQ60751 1373 aa10.22□□□□□ -0.77
Trim60-201ENSMUST00000048565 Rundc1Q0VDN7 615 aa10.22□□□□□ -0.77
Trim60-201ENSMUST00000048565 Clstn2Q9ER65 966 aa10.22□□□□□ -0.77
Trim60-201ENSMUST00000048565 Map3k5O35099 1380 aa10.22□□□□□ -0.77
Trim60-201ENSMUST00000048565 Gapvd1Q6PAR5 1458 aa10.22□□□□□ -0.77
Trim60-201ENSMUST00000048565 Spag9Q58A65 1321 aaKnown RBP10.21□□□□□ -0.77
Trim60-201ENSMUST00000048565 Washc2Q6PGL7 1334 aa10.21□□□□□ -0.77
Trim60-201ENSMUST00000048565 Polr3aB2RXC6 1390 aa10.21□□□□□ -0.77
Trim60-201ENSMUST00000048565 Ppip5k1A2ARP1 1436 aa10.21□□□□□ -0.78
Trim60-201ENSMUST00000048565 Stra8P70278 393 aa10.21□□□□□ -0.78
Trim60-201ENSMUST00000048565 Kif1bQ60575 1816 aaKnown RBP10.21□□□□□ -0.78
Trim60-201ENSMUST00000048565 Prdm16A2A935 1275 aa10.2□□□□□ -0.78
Trim60-201ENSMUST00000048565 Hnrnpul2Q00PI9 745 aaKnown RBP10.2□□□□□ -0.78
Trim60-201ENSMUST00000048565 Adamts13Q769J6 1426 aa10.2□□□□□ -0.78
Trim60-201ENSMUST00000048565 Myo5cE9Q1F5 1742 aa10.2□□□□□ -0.78
Trim60-201ENSMUST00000048565 Grwd1Q810D6 446 aaKnown RBP10.2□□□□□ -0.78
Trim60-201ENSMUST00000048565 Rsph4aQ8BYM7 716 aa10.2□□□□□ -0.78
Trim60-201ENSMUST00000048565 Card11Q8CIS0 1159 aa10.19□□□□□ -0.78
Trim60-201ENSMUST00000048565 Cwc22Q8C5N3 908 aaKnown RBP10.19□□□□□ -0.78
Trim60-201ENSMUST00000048565 Ifnlr1Q8CGK5 535 aa10.18□□□□□ -0.78
Trim60-201ENSMUST00000048565 Gm13695A2AK44 830 aa10.18□□□□□ -0.78
Trim60-201ENSMUST00000048565 Plekhg5Q66T02 1073 aa10.18□□□□□ -0.78
Trim60-201ENSMUST00000048565 Tnnt3Q9QZ47 272 aa10.17□□□□□ -0.78
Trim60-201ENSMUST00000048565 Edc4Q3UJB9 1406 aaKnown RBP10.17□□□□□ -0.78
Trim60-201ENSMUST00000048565 Nos1Q9Z0J4 1429 aa10.17□□□□□ -0.78
Trim60-201ENSMUST00000048565 Pde4cQ3UEI1 686 aa10.17□□□□□ -0.78
Trim60-201ENSMUST00000048565 Fndc1E9Q043 1732 aa10.16□□□□□ -0.78
Trim60-201ENSMUST00000048565 Tmem131lQ3U3D7 1597 aa10.16□□□□□ -0.78
Trim60-201ENSMUST00000048565 Setd1aE9PYH6 1716 aa10.16□□□□□ -0.78
Trim60-201ENSMUST00000048565 Tubgcp6G5E8P0 1769 aa10.15□□□□□ -0.78
Trim60-201ENSMUST00000048565 Tulp4Q9JIL5 1547 aa10.15□□□□□ -0.78
Trim60-201ENSMUST00000048565 Pelp1Q9DBD5 1123 aaKnown RBP10.15□□□□□ -0.78
Trim60-201ENSMUST00000048565 Kdm5cP41230 1554 aa10.15□□□□□ -0.78
Trim60-201ENSMUST00000048565 Aplp2Q06335 707 aa10.15□□□□□ -0.78
Trim60-201ENSMUST00000048565 Abca6Q8K441 1624 aa10.15□□□□□ -0.79
Trim60-201ENSMUST00000048565 Rock2P70336 1388 aa10.14□□□□□ -0.79
Trim60-201ENSMUST00000048565 Nsd2Q8BVE8 1365 aa10.14□□□□□ -0.79
Trim60-201ENSMUST00000048565 Exoc6Q8R313 802 aa10.14□□□□□ -0.79
Trim60-201ENSMUST00000048565 Uggt2E9Q4X2 1504 aa10.14□□□□□ -0.79
Trim60-201ENSMUST00000048565 Mrs2Q5NCE8 434 aa10.13□□□□□ -0.79
Trim60-201ENSMUST00000048565 Znf518aB2RRF6 1478 aaKnown RBP10.13□□□□□ -0.79
Trim60-201ENSMUST00000048565 Abcc6Q9R1S7 1498 aa10.12□□□□□ -0.79
Trim60-201ENSMUST00000048565 Topbp1Q6ZQF0 1515 aa10.12□□□□□ -0.79
Trim60-201ENSMUST00000048565 Arid3cA6PWV5 409 aa10.12□□□□□ -0.79
Trim60-201ENSMUST00000048565 Slc4a2P13808 1237 aaKnown RBP10.11□□□□□ -0.79
Trim60-201ENSMUST00000048565 Wwc2Q6NXJ0 1187 aa10.11□□□□□ -0.79
Trim60-201ENSMUST00000048565 Slc24a1Q91WD8 1130 aa10.11□□□□□ -0.79
Trim60-201ENSMUST00000048565 AnkarA2RT91 1465 aa10.11□□□□□ -0.79
Trim60-201ENSMUST00000048565 Gm38655A0A286YDK6 273 aa10.11□□□□□ -0.79
Trim60-201ENSMUST00000048565 Iqgap3F8VQ29 1632 aa10.11□□□□□ -0.79
Trim60-201ENSMUST00000048565 Prex1Q69ZK0 1650 aa10.11□□□□□ -0.79
Trim60-201ENSMUST00000048565 Ylpm1Q9R0I7 1386 aaKnown RBP10.11□□□□□ -0.79
Trim60-201ENSMUST00000048565 PnisrA2AJT4 805 aaKnown RBP10.09□□□□□ -0.79
Trim60-201ENSMUST00000048565 Ifit1bl1D3Z6F0 470 aa10.09□□□□□ -0.79
Trim60-201ENSMUST00000048565 Plch2A2AP18 1501 aa10.09□□□□□ -0.79
Trim60-201ENSMUST00000048565 Abca8aQ8K442 1620 aa10.09□□□□□ -0.79
Trim60-201ENSMUST00000048565 Prdm2A2A7B5 1709 aaKnown RBP10.09□□□□□ -0.79
Trim60-201ENSMUST00000048565 OvosQ3UU35 1456 aa10.09□□□□□ -0.79
Trim60-201ENSMUST00000048565 Rimbp2Q80U40 1072 aa10.08□□□□□ -0.8
Trim60-201ENSMUST00000048565 Kif3bQ61771 747 aa10.08□□□□□ -0.8
Trim60-201ENSMUST00000048565 Lemd3Q9WU40 921 aa10.08□□□□□ -0.8
Trim60-201ENSMUST00000048565 AglF8VPN4 1532 aa10.07□□□□□ -0.8
Trim60-201ENSMUST00000048565 Col17a1Q07563 1470 aa10.07□□□□□ -0.8
Trim60-201ENSMUST00000048565 Ak9G3UYQ4 1894 aa10.07□□□□□ -0.8
Trim60-201ENSMUST00000048565 SafbD3YXK2 937 aaKnown RBP10.07□□□□□ -0.8
Trim60-201ENSMUST00000048565 Trpm1Q2TV84 1622 aa10.07□□□□□ -0.8
Trim60-201ENSMUST00000048565 Atp10aO54827 1508 aa10.07□□□□□ -0.8
Trim60-201ENSMUST00000048565 Pola1P33609 1465 aa10.07□□□□□ -0.8
Trim60-201ENSMUST00000048565 Sall3Q62255 1320 aa10.07□□□□□ -0.8
Trim60-201ENSMUST00000048565 Cdc42bpgQ80UW5 1551 aa10.07□□□□□ -0.8
Trim60-201ENSMUST00000048565 Nlrp6Q91WS2 869 aa10.07□□□□□ -0.8
Trim60-201ENSMUST00000048565 Pabpn1Q8CCS6 302 aaKnown RBP10.06□□□□□ -0.8
Trim60-201ENSMUST00000048565 Cep152A2AUM9 1736 aaKnown RBP10.05□□□□□ -0.8
Trim60-201ENSMUST00000048565 AdgbG3UZ78 1657 aa10.05□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 59.9 ms