RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Tubgcp6G5E8P0 1769 aa21.82■■□□□ 1.08
Ttc39b-202ENSMUST00000048274 Fam208aQ69ZR9 1610 aaKnown RBP21.82■■□□□ 1.08
Ttc39b-202ENSMUST00000048274 Mast1Q9R1L5 1570 aa21.81■■□□□ 1.08
Ttc39b-202ENSMUST00000048274 Rgl3Q3UYI5 709 aa21.81■■□□□ 1.08
Ttc39b-202ENSMUST00000048274 Liat1Q810M6 228 aa21.8■■□□□ 1.08
Ttc39b-202ENSMUST00000048274 Rrbp1Q99PL5 1605 aaKnown RBP21.79■■□□□ 1.08
Ttc39b-202ENSMUST00000048274 Trak1Q6PD31 939 aa21.79■■□□□ 1.08
Ttc39b-202ENSMUST00000048274 Lrrc9Q8CDN9 1456 aa21.79■■□□□ 1.08
Ttc39b-202ENSMUST00000048274 Rusc2Q80U22 1514 aa21.79■■□□□ 1.08
Ttc39b-202ENSMUST00000048274 Dnmt1P13864 1620 aaKnown RBP21.78■■□□□ 1.08
Ttc39b-202ENSMUST00000048274 Tdrd9Q14BI7 1383 aa21.77■■□□□ 1.08
Ttc39b-202ENSMUST00000048274 Ofd1Q80Z25 1017 aa21.76■■□□□ 1.07
Ttc39b-202ENSMUST00000048274 Kank1E9Q238 1360 aa21.75■■□□□ 1.07
Ttc39b-202ENSMUST00000048274 Fancd2Q80V62 1450 aa21.72■■□□□ 1.07
Ttc39b-202ENSMUST00000048274 Ppip5k1A2ARP1 1436 aa21.72■■□□□ 1.07
Ttc39b-202ENSMUST00000048274 Kdm5cP41230 1554 aa21.71■■□□□ 1.07
Ttc39b-202ENSMUST00000048274 Map4P27546 1125 aaKnown RBP21.71■■□□□ 1.07
Ttc39b-202ENSMUST00000048274 L3mbtl2P59178 703 aa21.71■■□□□ 1.07
Ttc39b-202ENSMUST00000048274 Gm32742A0A1B0GT42 1604 aa21.7■■□□□ 1.06
Ttc39b-202ENSMUST00000048274 P3h3Q8CG70 732 aa21.68■■□□□ 1.06
Ttc39b-202ENSMUST00000048274 Clstn2Q9ER65 966 aa21.68■■□□□ 1.06
Ttc39b-202ENSMUST00000048274 Pdcd11Q6NS46 1862 aaKnown RBP21.68■■□□□ 1.06
Ttc39b-202ENSMUST00000048274 Rnf17Q99MV7 1640 aa21.67■■□□□ 1.06
Ttc39b-202ENSMUST00000048274 Egfem1Q8C088 590 aa21.67■■□□□ 1.06
Ttc39b-202ENSMUST00000048274 Bcl11aQ9QYE3 773 aa21.66■■□□□ 1.06
Ttc39b-202ENSMUST00000048274 Pcdh10E9PXQ7 1057 aa21.65■■□□□ 1.06
Ttc39b-202ENSMUST00000048274 Ssh2Q5SW75 1423 aa21.65■■□□□ 1.06
Ttc39b-202ENSMUST00000048274 Tcerg1Q8CGF7 1100 aaKnown RBP21.64■■□□□ 1.06
Ttc39b-202ENSMUST00000048274 Cfap74Q3UY96 1578 aa21.64■■□□□ 1.05
Ttc39b-202ENSMUST00000048274 Upf2A2AT37 1269 aaKnown RBP21.64■■□□□ 1.05
Ttc39b-202ENSMUST00000048274 Hecw1Q8K4P8 1604 aa21.64■■□□□ 1.05
Ttc39b-202ENSMUST00000048274 Tarbp1E9Q368 1579 aa21.62■■□□□ 1.05
Ttc39b-202ENSMUST00000048274 Jph4Q80WT0 628 aa21.62■■□□□ 1.05
Ttc39b-202ENSMUST00000048274 Pak3Q61036 559 aa21.61■■□□□ 1.05
Ttc39b-202ENSMUST00000048274 Kiaa1210E9Q0C6 1637 aa21.61■■□□□ 1.05
Ttc39b-202ENSMUST00000048274 TnikP83510 1323 aa21.61■■□□□ 1.05
Ttc39b-202ENSMUST00000048274 DiexfQ8BTT6 772 aaKnown RBP21.6■■□□□ 1.05
Ttc39b-202ENSMUST00000048274 Arid4bA2CG63 1314 aaKnown RBP21.59■■□□□ 1.05
Ttc39b-202ENSMUST00000048274 Grwd1Q810D6 446 aaKnown RBP21.58■■□□□ 1.05
Ttc39b-202ENSMUST00000048274 Atp7aQ64430 1491 aa21.58■■□□□ 1.04
Ttc39b-202ENSMUST00000048274 Anp32bQ9EST5 272 aaKnown RBP21.57■■□□□ 1.04
Ttc39b-202ENSMUST00000048274 Zscan21Q07231 555 aa21.56■■□□□ 1.04
Ttc39b-202ENSMUST00000048274 Neo1P97798 1493 aa21.56■■□□□ 1.04
Ttc39b-202ENSMUST00000048274 Robo2Q7TPD3 1470 aa21.56■■□□□ 1.04
Ttc39b-202ENSMUST00000048274 Plch2A2AP18 1501 aa21.55■■□□□ 1.04
Ttc39b-202ENSMUST00000048274 Cd109Q8R422 1442 aa21.55■■□□□ 1.04
Ttc39b-202ENSMUST00000048274 Erbb3Q61526 1339 aa21.55■■□□□ 1.04
Ttc39b-202ENSMUST00000048274 Ttc41Q692V3 1318 aa21.55■■□□□ 1.04
Ttc39b-202ENSMUST00000048274 Mak16Q8BGS0 296 aaKnown RBP21.55■■□□□ 1.04
Ttc39b-202ENSMUST00000048274 Adamts13Q769J6 1426 aa21.54■■□□□ 1.04
Ttc39b-202ENSMUST00000048274 Rpgrip1lQ8CG73 1264 aa21.54■■□□□ 1.04
Ttc39b-202ENSMUST00000048274 Ipo9Q91YE6 1041 aa21.54■■□□□ 1.04
Ttc39b-202ENSMUST00000048274 Adgrl3Q80TS3 1537 aa21.52■■□□□ 1.04
Ttc39b-202ENSMUST00000048274 Abcc3B2RX12 1523 aa21.52■■□□□ 1.04
Ttc39b-202ENSMUST00000048274 Ttbk1Q6PCN3 1308 aa21.51■■□□□ 1.03
Ttc39b-202ENSMUST00000048274 Tex14Q7M6U3 1450 aa21.51■■□□□ 1.03
Ttc39b-202ENSMUST00000048274 Sbno1Q689Z5 1390 aa21.51■■□□□ 1.03
Ttc39b-202ENSMUST00000048274 Arhgap5P97393 1501 aa21.51■■□□□ 1.03
Ttc39b-202ENSMUST00000048274 Prkrip1Q9CWV6 186 aaKnown RBP21.5■■□□□ 1.03
Ttc39b-202ENSMUST00000048274 Clasp1Q80TV8 1535 aaKnown RBP21.5■■□□□ 1.03
Ttc39b-202ENSMUST00000048274 Cep170Q6A065 1588 aa21.5■■□□□ 1.03
Ttc39b-202ENSMUST00000048274 Zfp444Q3TDV8 331 aaKnown RBP21.49■■□□□ 1.03
Ttc39b-202ENSMUST00000048274 Hdac5Q9Z2V6 1113 aa21.48■■□□□ 1.03
Ttc39b-202ENSMUST00000048274 Trappc8E9PWG2 1437 aa21.47■■□□□ 1.03
Ttc39b-202ENSMUST00000048274 Prdm16A2A935 1275 aa21.45■■□□□ 1.02
Ttc39b-202ENSMUST00000048274 PrxO55103 1391 aa21.44■■□□□ 1.02
Ttc39b-202ENSMUST00000048274 Ccdc27Q3V036 639 aa21.44■■□□□ 1.02
Ttc39b-202ENSMUST00000048274 NhsB1AV60 1647 aa21.44■■□□□ 1.02
Ttc39b-202ENSMUST00000048274 AnkarA2RT91 1465 aa21.43■■□□□ 1.02
Ttc39b-202ENSMUST00000048274 Pola1P33609 1465 aa21.43■■□□□ 1.02
Ttc39b-202ENSMUST00000048274 Rrp7aQ9D1C9 280 aaKnown RBP21.43■■□□□ 1.02
Ttc39b-202ENSMUST00000048274 Fgd6Q69ZL1 1399 aa21.42■■□□□ 1.02
Ttc39b-202ENSMUST00000048274 Cdc42bpbQ7TT50 1713 aa21.42■■□□□ 1.02
Ttc39b-202ENSMUST00000048274 Kcnh8P59111 1102 aa21.41■■□□□ 1.02
Ttc39b-202ENSMUST00000048274 Mbd3Q9Z2D8 285 aaKnown RBP21.41■■□□□ 1.02
Ttc39b-202ENSMUST00000048274 Edc4Q3UJB9 1406 aaKnown RBP21.41■■□□□ 1.02
Ttc39b-202ENSMUST00000048274 Abca17E9PX95 1733 aa21.4■■□□□ 1.02
Ttc39b-202ENSMUST00000048274 AI481877A2ALV5 1481 aa21.4■■□□□ 1.02
Ttc39b-202ENSMUST00000048274 Zmym3Q9JLM4 1370 aa21.39■■□□□ 1.01
Ttc39b-202ENSMUST00000048274 Slc4a3P16283 1227 aa21.39■■□□□ 1.01
Ttc39b-202ENSMUST00000048274 Sart1Q9Z315 806 aaKnown RBP21.39■■□□□ 1.01
Ttc39b-202ENSMUST00000048274 Atf7ipQ7TT18 1306 aa21.38■■□□□ 1.01
Ttc39b-202ENSMUST00000048274 Tulp4Q9JIL5 1547 aa21.37■■□□□ 1.01
Ttc39b-202ENSMUST00000048274 Q7TT23 1179 aa21.37■■□□□ 1.01
Ttc39b-202ENSMUST00000048274 Pank3Q8R2W9 370 aa21.36■■□□□ 1.01
Ttc39b-202ENSMUST00000048274 PtprtQ99M80 1454 aa21.36■■□□□ 1.01
Ttc39b-202ENSMUST00000048274 Nsd2Q8BVE8 1365 aa21.35■■□□□ 1.01
Ttc39b-202ENSMUST00000048274 Abca8bQ8K440 1620 aa21.35■■□□□ 1.01
Ttc39b-202ENSMUST00000048274 Zscan10Q3URR7 782 aa21.35■■□□□ 1.01
Ttc39b-202ENSMUST00000048274 Gm16486A0A1D5RMD1 1434 aa21.35■■□□□ 1.01
Ttc39b-202ENSMUST00000048274 Uggt2E9Q4X2 1504 aa21.34■■□□□ 1.01
Ttc39b-202ENSMUST00000048274 Gm14025A2AP89 1413 aa21.34■■□□□ 1.01
Ttc39b-202ENSMUST00000048274 Kif1bQ60575 1816 aaKnown RBP21.34■■□□□ 1.01
Ttc39b-202ENSMUST00000048274 Spag9Q58A65 1321 aaKnown RBP21.34■■□□□ 1.01
Ttc39b-202ENSMUST00000048274 ShprhQ7TPQ3 1674 aa21.34■■□□□ 1.01
Ttc39b-202ENSMUST00000048274 Tmf1B9EKI3 1091 aa21.33■■□□□ 1.01
Ttc39b-202ENSMUST00000048274 NeflP08551 543 aa21.33■■□□□ 1.01
Ttc39b-202ENSMUST00000048274 Gm156Q58A37 223 aa21.32■■□□□ 1
Ttc39b-202ENSMUST00000048274 Ccdc9Q8VC31 543 aaKnown RBP21.32■■□□□ 1
Ttc39b-202ENSMUST00000048274 Ifit1bl1D3Z6F0 470 aa21.31■■□□□ 1
Retrieved 100 of 22,080 RNA–protein pairs in 48.6 ms