RNA–Protein interactions for RNA: ENSMUST00000047349.7

Usp28-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Usp28, Length 4,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-201ENSMUST00000047349 SafbD3YXK2 937 aaKnown RBP12.67□□□□□ -0.38
Usp28-201ENSMUST00000047349 Polr3aB2RXC6 1390 aa12.67□□□□□ -0.38
Usp28-201ENSMUST00000047349 RalgapbQ8BQZ4 1484 aa12.67□□□□□ -0.38
Usp28-201ENSMUST00000047349 Prdm16A2A935 1275 aa12.65□□□□□ -0.38
Usp28-201ENSMUST00000047349 PnisrA2AJT4 805 aaKnown RBP12.65□□□□□ -0.38
Usp28-201ENSMUST00000047349 Hecw1Q8K4P8 1604 aa12.65□□□□□ -0.38
Usp28-201ENSMUST00000047349 Wwc2Q6NXJ0 1187 aa12.65□□□□□ -0.38
Usp28-201ENSMUST00000047349 Sart1Q9Z315 806 aaKnown RBP12.65□□□□□ -0.38
Usp28-201ENSMUST00000047349 Gm32742A0A1B0GT42 1604 aa12.64□□□□□ -0.39
Usp28-201ENSMUST00000047349 Grwd1Q810D6 446 aaKnown RBP12.64□□□□□ -0.39
Usp28-201ENSMUST00000047349 Ssh2Q5SW75 1423 aa12.64□□□□□ -0.39
Usp28-201ENSMUST00000047349 Cd109Q8R422 1442 aa12.63□□□□□ -0.39
Usp28-201ENSMUST00000047349 Slc4a2P13808 1237 aaKnown RBP12.63□□□□□ -0.39
Usp28-201ENSMUST00000047349 Dot1lQ6XZL8 1540 aa12.61□□□□□ -0.39
Usp28-201ENSMUST00000047349 Ppip5k1A2ARP1 1436 aa12.61□□□□□ -0.39
Usp28-201ENSMUST00000047349 Eif5bQ05D44 1216 aaKnown RBP12.61□□□□□ -0.39
Usp28-201ENSMUST00000047349 Cdk13Q69ZA1 1511 aaKnown RBP12.6□□□□□ -0.39
Usp28-201ENSMUST00000047349 Trappc8E9PWG2 1437 aa12.6□□□□□ -0.39
Usp28-201ENSMUST00000047349 NhsB1AV60 1647 aa12.59□□□□□ -0.39
Usp28-201ENSMUST00000047349 Iqgap1Q9JKF1 1657 aaKnown RBP12.59□□□□□ -0.39
Usp28-201ENSMUST00000047349 Spag9Q58A65 1321 aaKnown RBP12.59□□□□□ -0.39
Usp28-201ENSMUST00000047349 Pdcd11Q6NS46 1862 aaKnown RBP12.59□□□□□ -0.39
Usp28-201ENSMUST00000047349 Zbtb7cQ8VCZ7 619 aa12.58□□□□□ -0.4
Usp28-201ENSMUST00000047349 Abcc1O35379 1528 aa12.58□□□□□ -0.4
Usp28-201ENSMUST00000047349 AI481877A2ALV5 1481 aa12.58□□□□□ -0.4
Usp28-201ENSMUST00000047349 Arid4bA2CG63 1314 aaKnown RBP12.58□□□□□ -0.4
Usp28-201ENSMUST00000047349 Washc2Q6PGL7 1334 aa12.58□□□□□ -0.4
Usp28-201ENSMUST00000047349 Nsd2Q8BVE8 1365 aa12.57□□□□□ -0.4
Usp28-201ENSMUST00000047349 Atp7aQ64430 1491 aa12.57□□□□□ -0.4
Usp28-201ENSMUST00000047349 Pelp1Q9DBD5 1123 aaKnown RBP12.57□□□□□ -0.4
Usp28-201ENSMUST00000047349 Abcc3B2RX12 1523 aa12.57□□□□□ -0.4
Usp28-201ENSMUST00000047349 Igf1rQ60751 1373 aa12.56□□□□□ -0.4
Usp28-201ENSMUST00000047349 Atp10dQ8K2X1 1416 aa12.56□□□□□ -0.4
Usp28-201ENSMUST00000047349 Rtl5Q5DTT4 599 aa12.55□□□□□ -0.4
Usp28-201ENSMUST00000047349 Abca8bQ8K440 1620 aa12.54□□□□□ -0.4
Usp28-201ENSMUST00000047349 Setd1aE9PYH6 1716 aa12.54□□□□□ -0.4
Usp28-201ENSMUST00000047349 Ofd1Q80Z25 1017 aa12.54□□□□□ -0.4
Usp28-201ENSMUST00000047349 Gapvd1Q6PAR5 1458 aa12.54□□□□□ -0.4
Usp28-201ENSMUST00000047349 Fam71e1A1L3C1 212 aa12.53□□□□□ -0.4
Usp28-201ENSMUST00000047349 Wdr43Q6ZQL4 677 aaKnown RBP12.53□□□□□ -0.4
Usp28-201ENSMUST00000047349 Pde4cQ3UEI1 686 aa12.52□□□□□ -0.4
Usp28-201ENSMUST00000047349 Mroh3A0A1D5RM54 893 aa12.52□□□□□ -0.41
Usp28-201ENSMUST00000047349 Chd1P40201 1711 aa12.51□□□□□ -0.41
Usp28-201ENSMUST00000047349 Upf2A2AT37 1269 aaKnown RBP12.51□□□□□ -0.41
Usp28-201ENSMUST00000047349 Ifit1bl1D3Z6F0 470 aa12.51□□□□□ -0.41
Usp28-201ENSMUST00000047349 Zmym4A2A791 1549 aaKnown RBP12.5□□□□□ -0.41
Usp28-201ENSMUST00000047349 Cep170Q6A065 1588 aa12.5□□□□□ -0.41
Usp28-201ENSMUST00000047349 Tarbp1E9Q368 1579 aa12.49□□□□□ -0.41
Usp28-201ENSMUST00000047349 Cdc42bpbQ7TT50 1713 aa12.48□□□□□ -0.41
Usp28-201ENSMUST00000047349 Robo2Q7TPD3 1470 aa12.48□□□□□ -0.41
Usp28-201ENSMUST00000047349 Kdm5cP41230 1554 aa12.48□□□□□ -0.41
Usp28-201ENSMUST00000047349 Kif1bQ60575 1816 aaKnown RBP12.47□□□□□ -0.41
Usp28-201ENSMUST00000047349 Zscan21Q07231 555 aa12.47□□□□□ -0.41
Usp28-201ENSMUST00000047349 Ppp4r2Q0VGB7 417 aa12.47□□□□□ -0.41
Usp28-201ENSMUST00000047349 Map3k5O35099 1380 aa12.46□□□□□ -0.41
Usp28-201ENSMUST00000047349 Ylpm1Q9R0I7 1386 aaKnown RBP12.46□□□□□ -0.41
Usp28-201ENSMUST00000047349 Usp54Q8BL06 1588 aaKnown RBP12.46□□□□□ -0.42
Usp28-201ENSMUST00000047349 Edc4Q3UJB9 1406 aaKnown RBP12.45□□□□□ -0.42
Usp28-201ENSMUST00000047349 Tmf1B9EKI3 1091 aa12.45□□□□□ -0.42
Usp28-201ENSMUST00000047349 Erich6D3Z6S9 713 aa12.44□□□□□ -0.42
Usp28-201ENSMUST00000047349 Abca17E9PX95 1733 aa12.44□□□□□ -0.42
Usp28-201ENSMUST00000047349 Mak16Q8BGS0 296 aaKnown RBP12.43□□□□□ -0.42
Usp28-201ENSMUST00000047349 Lemd3Q9WU40 921 aa12.43□□□□□ -0.42
Usp28-201ENSMUST00000047349 AnkarA2RT91 1465 aa12.43□□□□□ -0.42
Usp28-201ENSMUST00000047349 Nolc1E9Q5C9 702 aaKnown RBP12.43□□□□□ -0.42
Usp28-201ENSMUST00000047349 Stard8Q8K031 1019 aa12.43□□□□□ -0.42
Usp28-201ENSMUST00000047349 P3h3Q8CG70 732 aa12.43□□□□□ -0.42
Usp28-201ENSMUST00000047349 Sbno1Q689Z5 1390 aa12.42□□□□□ -0.42
Usp28-201ENSMUST00000047349 Kidins220E9Q9B7 1793 aa12.42□□□□□ -0.42
Usp28-201ENSMUST00000047349 Os9Q8K2C7 672 aa12.42□□□□□ -0.42
Usp28-201ENSMUST00000047349 Srcin1Q9QWI6 1250 aa12.42□□□□□ -0.42
Usp28-201ENSMUST00000047349 ShprhQ7TPQ3 1674 aa12.42□□□□□ -0.42
Usp28-201ENSMUST00000047349 Adamts13Q769J6 1426 aa12.41□□□□□ -0.42
Usp28-201ENSMUST00000047349 Ifnlr1Q8CGK5 535 aa12.41□□□□□ -0.42
Usp28-201ENSMUST00000047349 Pank3Q8R2W9 370 aa12.41□□□□□ -0.42
Usp28-201ENSMUST00000047349 Zbtb4Q5F293 982 aa12.41□□□□□ -0.42
Usp28-201ENSMUST00000047349 PrxO55103 1391 aa12.41□□□□□ -0.42
Usp28-201ENSMUST00000047349 Rpgrip1lQ8CG73 1264 aa12.41□□□□□ -0.42
Usp28-201ENSMUST00000047349 Abcc6Q9R1S7 1498 aa12.4□□□□□ -0.42
Usp28-201ENSMUST00000047349 Ythdc2B2RR83 1445 aaKnown RBP12.4□□□□□ -0.42
Usp28-201ENSMUST00000047349 NeflP08551 543 aa12.4□□□□□ -0.42
Usp28-201ENSMUST00000047349 Kif3bQ61771 747 aa12.4□□□□□ -0.42
Usp28-201ENSMUST00000047349 Zfyve16Q80U44 1528 aa12.4□□□□□ -0.42
Usp28-201ENSMUST00000047349 Tulp4Q9JIL5 1547 aa12.4□□□□□ -0.42
Usp28-201ENSMUST00000047349 Zscan10Q3URR7 782 aa12.39□□□□□ -0.43
Usp28-201ENSMUST00000047349 Ttbk1Q6PCN3 1308 aa12.39□□□□□ -0.43
Usp28-201ENSMUST00000047349 ErbinQ80TH2 1402 aa12.38□□□□□ -0.43
Usp28-201ENSMUST00000047349 Tubgcp6G5E8P0 1769 aa12.38□□□□□ -0.43
Usp28-201ENSMUST00000047349 Supt16hQ920B9 1047 aa12.38□□□□□ -0.43
Usp28-201ENSMUST00000047349 Uggt2E9Q4X2 1504 aa12.37□□□□□ -0.43
Usp28-201ENSMUST00000047349 Nos1Q9Z0J4 1429 aa12.37□□□□□ -0.43
Usp28-201ENSMUST00000047349 Kank1E9Q238 1360 aa12.37□□□□□ -0.43
Usp28-201ENSMUST00000047349 Gm20521D3Z5F7 333 aa12.37□□□□□ -0.43
Usp28-201ENSMUST00000047349 Inpp5dQ9ES52 1191 aa12.37□□□□□ -0.43
Usp28-201ENSMUST00000047349 Znf518aB2RRF6 1478 aaKnown RBP12.37□□□□□ -0.43
Usp28-201ENSMUST00000047349 Kdm2aP59997 1161 aa12.37□□□□□ -0.43
Usp28-201ENSMUST00000047349 Znf608Q56A10 1511 aa12.36□□□□□ -0.43
Usp28-201ENSMUST00000047349 Xrn1P97789 1719 aaKnown RBP12.36□□□□□ -0.43
Usp28-201ENSMUST00000047349 Srpk2O54781 681 aaKnown RBP12.35□□□□□ -0.43
Usp28-201ENSMUST00000047349 Plch2A2AP18 1501 aa12.35□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 135.6 ms