RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Rock1P70335 1354 aa11.24□□□□□ -0.61
Sf3b1-201ENSMUST00000027127 Srcin1Q9QWI6 1250 aa11.24□□□□□ -0.61
Sf3b1-201ENSMUST00000027127 Gtf2e1Q9D0D5 440 aa11.23□□□□□ -0.61
Sf3b1-201ENSMUST00000027127 Prex2Q3LAC4 1598 aa11.23□□□□□ -0.61
Sf3b1-201ENSMUST00000027127 Rrbp1Q99PL5 1605 aaKnown RBP11.23□□□□□ -0.61
Sf3b1-201ENSMUST00000027127 Adgrl2Q8JZZ7 1487 aa11.23□□□□□ -0.61
Sf3b1-201ENSMUST00000027127 Kiaa1551Q5DTW7 1521 aa11.23□□□□□ -0.61
Sf3b1-201ENSMUST00000027127 Lrriq1Q0P5X1 1673 aa11.23□□□□□ -0.61
Sf3b1-201ENSMUST00000027127 Asxl1P59598 1514 aa11.22□□□□□ -0.61
Sf3b1-201ENSMUST00000027127 Map3k4O08648 1597 aa11.22□□□□□ -0.61
Sf3b1-201ENSMUST00000027127 Polr3aB2RXC6 1390 aa11.22□□□□□ -0.61
Sf3b1-201ENSMUST00000027127 Cfap74Q3UY96 1578 aa11.22□□□□□ -0.61
Sf3b1-201ENSMUST00000027127 Mak16Q8BGS0 296 aaKnown RBP11.21□□□□□ -0.61
Sf3b1-201ENSMUST00000027127 Rad21Q61550 635 aaKnown RBP11.21□□□□□ -0.62
Sf3b1-201ENSMUST00000027127 PnisrA2AJT4 805 aaKnown RBP11.21□□□□□ -0.62
Sf3b1-201ENSMUST00000027127 Rsph4aQ8BYM7 716 aa11.2□□□□□ -0.62
Sf3b1-201ENSMUST00000027127 Pabpn1Q8CCS6 302 aaKnown RBP11.2□□□□□ -0.62
Sf3b1-201ENSMUST00000027127 Wdr7Q920I9 1489 aa11.19□□□□□ -0.62
Sf3b1-201ENSMUST00000027127 SafbD3YXK2 937 aaKnown RBP11.19□□□□□ -0.62
Sf3b1-201ENSMUST00000027127 Abcc2Q8VI47 1543 aa11.19□□□□□ -0.62
Sf3b1-201ENSMUST00000027127 Adgrb2Q8CGM1 1561 aa11.19□□□□□ -0.62
Sf3b1-201ENSMUST00000027127 Atp10dQ8K2X1 1416 aa11.19□□□□□ -0.62
Sf3b1-201ENSMUST00000027127 Mbd3Q9Z2D8 285 aaKnown RBP11.18□□□□□ -0.62
Sf3b1-201ENSMUST00000027127 ErbinQ80TH2 1402 aa11.18□□□□□ -0.62
Sf3b1-201ENSMUST00000027127 Map3k5O35099 1380 aa11.18□□□□□ -0.62
Sf3b1-201ENSMUST00000027127 Stag3O70576 1240 aa11.17□□□□□ -0.62
Sf3b1-201ENSMUST00000027127 P3h3Q8CG70 732 aa11.17□□□□□ -0.62
Sf3b1-201ENSMUST00000027127 AI481877A2ALV5 1481 aa11.16□□□□□ -0.62
Sf3b1-201ENSMUST00000027127 Cul7Q8VE73 1689 aa11.16□□□□□ -0.62
Sf3b1-201ENSMUST00000027127 Fmn2Q9JL04 1578 aa11.16□□□□□ -0.62
Sf3b1-201ENSMUST00000027127 Pank3Q8R2W9 370 aa11.16□□□□□ -0.62
Sf3b1-201ENSMUST00000027127 Lamc1P02468 1607 aaKnown RBP11.15□□□□□ -0.62
Sf3b1-201ENSMUST00000027127 Slc4a2P13808 1237 aaKnown RBP11.15□□□□□ -0.62
Sf3b1-201ENSMUST00000027127 PtprgQ05909 1442 aa11.15□□□□□ -0.63
Sf3b1-201ENSMUST00000027127 Cpsf1Q9EPU4 1441 aaKnown RBP11.15□□□□□ -0.63
Sf3b1-201ENSMUST00000027127 Eif4g3Q80XI3 1579 aaKnown RBP11.14□□□□□ -0.63
Sf3b1-201ENSMUST00000027127 Dennd4bQ3U1Y4 1499 aa11.14□□□□□ -0.63
Sf3b1-201ENSMUST00000027127 Lrrc9Q8CDN9 1456 aa11.14□□□□□ -0.63
Sf3b1-201ENSMUST00000027127 Prdm10Q3UTQ7 1184 aa11.14□□□□□ -0.63
Sf3b1-201ENSMUST00000027127 AlkP97793 1621 aa11.13□□□□□ -0.63
Sf3b1-201ENSMUST00000027127 Slc4a1apE9PX68 744 aa11.13□□□□□ -0.63
Sf3b1-201ENSMUST00000027127 Fam184bQ0KK56 942 aa11.13□□□□□ -0.63
Sf3b1-201ENSMUST00000027127 Zscan10Q3URR7 782 aa11.13□□□□□ -0.63
Sf3b1-201ENSMUST00000027127 Abcc1O35379 1528 aa11.13□□□□□ -0.63
Sf3b1-201ENSMUST00000027127 Fam71e1A1L3C1 212 aa11.12□□□□□ -0.63
Sf3b1-201ENSMUST00000027127 Ssh2Q5SW75 1423 aa11.12□□□□□ -0.63
Sf3b1-201ENSMUST00000027127 RalgapbQ8BQZ4 1484 aa11.12□□□□□ -0.63
Sf3b1-201ENSMUST00000027127 Trappc8E9PWG2 1437 aa11.12□□□□□ -0.63
Sf3b1-201ENSMUST00000027127 Setbp1Q9Z180 1582 aa11.11□□□□□ -0.63
Sf3b1-201ENSMUST00000027127 Exosc9Q9JHI7 438 aaKnown RBP11.11□□□□□ -0.63
Sf3b1-201ENSMUST00000027127 Washc2Q6PGL7 1334 aa11.11□□□□□ -0.63
Sf3b1-201ENSMUST00000027127 Inpp5dQ9ES52 1191 aa11.11□□□□□ -0.63
Sf3b1-201ENSMUST00000027127 Atp7aQ64430 1491 aa11.11□□□□□ -0.63
Sf3b1-201ENSMUST00000027127 Ylpm1Q9R0I7 1386 aaKnown RBP11.1□□□□□ -0.63
Sf3b1-201ENSMUST00000027127 Mug2P28666 1451 aa11.1□□□□□ -0.63
Sf3b1-201ENSMUST00000027127 Naip6Q9JIB6 1403 aa11.1□□□□□ -0.63
Sf3b1-201ENSMUST00000027127 Fan1Q69ZT1 1020 aa11.1□□□□□ -0.63
Sf3b1-201ENSMUST00000027127 Usp40Q8BWR4 1235 aa11.09□□□□□ -0.63
Sf3b1-201ENSMUST00000027127 CenpjQ569L8 1344 aa11.08□□□□□ -0.63
Sf3b1-201ENSMUST00000027127 Ppip5k1A2ARP1 1436 aa11.08□□□□□ -0.64
Sf3b1-201ENSMUST00000027127 SphkapQ6NSW3 1687 aa11.08□□□□□ -0.64
Sf3b1-201ENSMUST00000027127 Tcerg1Q8CGF7 1100 aaKnown RBP11.08□□□□□ -0.64
Sf3b1-201ENSMUST00000027127 Dnmt1P13864 1620 aaKnown RBP11.08□□□□□ -0.64
Sf3b1-201ENSMUST00000027127 Rwdd1Q9CQK7 243 aa11.08□□□□□ -0.64
Sf3b1-201ENSMUST00000027127 Cdc42bpaQ3UU96 1719 aa11.07□□□□□ -0.64
Sf3b1-201ENSMUST00000027127 Ppp1r18Q8BQ30 594 aa11.07□□□□□ -0.64
Sf3b1-201ENSMUST00000027127 Dcaf11Q91VU6 549 aa11.07□□□□□ -0.64
Sf3b1-201ENSMUST00000027127 Kdm6bQ5NCY0 1641 aa11.07□□□□□ -0.64
Sf3b1-201ENSMUST00000027127 Ythdc2B2RR83 1445 aaKnown RBP11.07□□□□□ -0.64
Sf3b1-201ENSMUST00000027127 Fam208aQ69ZR9 1610 aaKnown RBP11.06□□□□□ -0.64
Sf3b1-201ENSMUST00000027127 Rpgrip1lQ8CG73 1264 aa11.06□□□□□ -0.64
Sf3b1-201ENSMUST00000027127 Ttc21bQ0HA38 1315 aa11.05□□□□□ -0.64
Sf3b1-201ENSMUST00000027127 Supt6hQ62383 1726 aaKnown RBP11.05□□□□□ -0.64
Sf3b1-201ENSMUST00000027127 Mroh2aD3Z750 1679 aa11.05□□□□□ -0.64
Sf3b1-201ENSMUST00000027127 Polr3glQ8R0C0 218 aa11.05□□□□□ -0.64
Sf3b1-201ENSMUST00000027127 Pprc1Q6NZN1 1644 aa11.04□□□□□ -0.64
Sf3b1-201ENSMUST00000027127 OvosQ3UU35 1456 aa11.04□□□□□ -0.64
Sf3b1-201ENSMUST00000027127 Neurl4Q5NCX5 1563 aa11.04□□□□□ -0.64
Sf3b1-201ENSMUST00000027127 Golga2Q921M4 999 aa11.03□□□□□ -0.64
Sf3b1-201ENSMUST00000027127 Rab3gap2Q8BMG7 1366 aa11.03□□□□□ -0.64
Sf3b1-201ENSMUST00000027127 Cnga1P29974 684 aa11.03□□□□□ -0.64
Sf3b1-201ENSMUST00000027127 Kif7B7ZNG0 1348 aa11.03□□□□□ -0.64
Sf3b1-201ENSMUST00000027127 PrxO55103 1391 aa11.02□□□□□ -0.64
Sf3b1-201ENSMUST00000027127 Speer4f1Q9D5Q6 258 aa11.02□□□□□ -0.64
Sf3b1-201ENSMUST00000027127 Puf60Q3UEB3 564 aaKnown RBP11.02□□□□□ -0.65
Sf3b1-201ENSMUST00000027127 Mapk8ip3Q9ESN9 1337 aa11.02□□□□□ -0.65
Sf3b1-201ENSMUST00000027127 Mast1Q9R1L5 1570 aa11.02□□□□□ -0.65
Sf3b1-201ENSMUST00000027127 Safb2Q80YR5 991 aaKnown RBP11.02□□□□□ -0.65
Sf3b1-201ENSMUST00000027127 Neurod2Q62414 383 aa11.01□□□□□ -0.65
Sf3b1-201ENSMUST00000027127 Mbd5B1AYB6 1498 aa11.01□□□□□ -0.65
Sf3b1-201ENSMUST00000027127 Trpm2Q91YD4 1506 aa11□□□□□ -0.65
Sf3b1-201ENSMUST00000027127 Rnf17Q99MV7 1640 aa11□□□□□ -0.65
Sf3b1-201ENSMUST00000027127 Zfp777B9EKF4 885 aa11□□□□□ -0.65
Sf3b1-201ENSMUST00000027127 Supt16hQ920B9 1047 aa11□□□□□ -0.65
Sf3b1-201ENSMUST00000027127 Ppp2r1aQ76MZ3 589 aa10.99□□□□□ -0.65
Sf3b1-201ENSMUST00000027127 Slc52a2Q9D8F3 450 aa10.99□□□□□ -0.65
Sf3b1-201ENSMUST00000027127 Cdk13Q69ZA1 1511 aaKnown RBP10.99□□□□□ -0.65
Sf3b1-201ENSMUST00000027127 Kiaa1210E9Q0C6 1637 aa10.98□□□□□ -0.65
Sf3b1-201ENSMUST00000027127 NudcO35685 332 aaKnown RBP10.98□□□□□ -0.65
Sf3b1-201ENSMUST00000027127 Ralbp1Q62172 648 aa10.98□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms