RNA–Protein interactions for RNA: ENSMUST00000025262.5

Ltb-201, Transcript of Lymphotoxin-beta, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ltb, Length 1,160 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ltb-201ENSMUST00000025262 Arhgap23Q69ZH9 1483 aa30.7■■■□□ 2.5
Ltb-201ENSMUST00000025262 Naip1Q9QWK5 1403 aa30.68■■■□□ 2.5
Ltb-201ENSMUST00000025262 Scaf11E9PZM7 1456 aaKnown RBP30.68■■■□□ 2.5
Ltb-201ENSMUST00000025262 Znf518aB2RRF6 1478 aaKnown RBP30.67■■■□□ 2.5
Ltb-201ENSMUST00000025262 Rapgef3Q8VCC8 918 aa30.66■■■□□ 2.5
Ltb-201ENSMUST00000025262 Kdm3bQ6ZPY7 1562 aa30.66■■■□□ 2.5
Ltb-201ENSMUST00000025262 Gm13697A2AK42 830 aa30.65■■■□□ 2.5
Ltb-201ENSMUST00000025262 Ccnb3Q810T2 1396 aa30.64■■■□□ 2.5
Ltb-201ENSMUST00000025262 Naip5Q9R016 1403 aa30.63■■■□□ 2.49
Ltb-201ENSMUST00000025262 Xrn1P97789 1719 aaKnown RBP30.61■■■□□ 2.49
Ltb-201ENSMUST00000025262 Kif3bQ61771 747 aa30.59■■■□□ 2.49
Ltb-201ENSMUST00000025262 Bcl11bQ99PV8 884 aa30.59■■■□□ 2.49
Ltb-201ENSMUST00000025262 Rims2Q9EQZ7 1530 aa30.58■■■□□ 2.49
Ltb-201ENSMUST00000025262 Lmtk2Q3TYD6 1471 aa30.58■■■□□ 2.49
Ltb-201ENSMUST00000025262 Uggt2E9Q4X2 1504 aa30.57■■■□□ 2.48
Ltb-201ENSMUST00000025262 PzpQ61838 1495 aa30.55■■■□□ 2.48
Ltb-201ENSMUST00000025262 Kif7B7ZNG0 1348 aa30.54■■■□□ 2.48
Ltb-201ENSMUST00000025262 Cdk11bP24788 784 aaKnown RBP30.54■■■□□ 2.48
Ltb-201ENSMUST00000025262 Rsph4aQ8BYM7 716 aa30.54■■■□□ 2.48
Ltb-201ENSMUST00000025262 Rrp7aQ9D1C9 280 aaKnown RBP30.53■■■□□ 2.48
Ltb-201ENSMUST00000025262 Abcc6Q9R1S7 1498 aa30.51■■■□□ 2.48
Ltb-201ENSMUST00000025262 Topbp1Q6ZQF0 1515 aa30.49■■■□□ 2.47
Ltb-201ENSMUST00000025262 Fmn2Q9JL04 1578 aa30.47■■■□□ 2.47
Ltb-201ENSMUST00000025262 Prdm16A2A935 1275 aa30.46■■■□□ 2.47
Ltb-201ENSMUST00000025262 DroshaQ5HZJ0 1373 aaKnown RBP30.45■■■□□ 2.47
Ltb-201ENSMUST00000025262 Plch2A2AP18 1501 aa30.42■■■□□ 2.46
Ltb-201ENSMUST00000025262 Zc3h13E9Q784 1729 aaKnown RBP30.42■■■□□ 2.46
Ltb-201ENSMUST00000025262 Hfm1D3Z4R1 1434 aa30.36■■■□□ 2.45
Ltb-201ENSMUST00000025262 Mast1Q9R1L5 1570 aa30.34■■■□□ 2.45
Ltb-201ENSMUST00000025262 Adgrb2Q8CGM1 1561 aa30.31■■■□□ 2.44
Ltb-201ENSMUST00000025262 Arid4bA2CG63 1314 aaKnown RBP30.28■■■□□ 2.44
Ltb-201ENSMUST00000025262 Nrxn3Q6P9K9 1571 aa30.27■■■□□ 2.44
Ltb-201ENSMUST00000025262 Iqgap1Q9JKF1 1657 aaKnown RBP30.26■■■□□ 2.43
Ltb-201ENSMUST00000025262 Tubgcp6G5E8P0 1769 aa30.26■■■□□ 2.43
Ltb-201ENSMUST00000025262 Spag9Q58A65 1321 aaKnown RBP30.24■■■□□ 2.43
Ltb-201ENSMUST00000025262 Zbtb7cQ8VCZ7 619 aa30.24■■■□□ 2.43
Ltb-201ENSMUST00000025262 Asxl1P59598 1514 aa30.23■■■□□ 2.43
Ltb-201ENSMUST00000025262 Fbln2P37889 1221 aa30.23■■■□□ 2.43
Ltb-201ENSMUST00000025262 Robo2Q7TPD3 1470 aa30.21■■■□□ 2.43
Ltb-201ENSMUST00000025262 Chd2E9PZM4 1827 aaKnown RBP30.19■■■□□ 2.42
Ltb-201ENSMUST00000025262 Usp54Q8BL06 1588 aaKnown RBP30.19■■■□□ 2.42
Ltb-201ENSMUST00000025262 Abca17E9PX95 1733 aa30.19■■■□□ 2.42
Ltb-201ENSMUST00000025262 Mtus2Q3UHD3 1353 aa30.18■■■□□ 2.42
Ltb-201ENSMUST00000025262 Abcc5Q9R1X5 1436 aa30.18■■■□□ 2.42
Ltb-201ENSMUST00000025262 Amigo3Q8C2S7 508 aa30.14■■■□□ 2.42
Ltb-201ENSMUST00000025262 Adamts7Q68SA9 1657 aa30.1■■■□□ 2.41
Ltb-201ENSMUST00000025262 Prex1Q69ZK0 1650 aa30.08■■■□□ 2.41
Ltb-201ENSMUST00000025262 DnmbpQ6TXD4 1580 aa30.07■■■□□ 2.4
Ltb-201ENSMUST00000025262 Vps8Q0P5W1 1427 aa30.07■■■□□ 2.4
Ltb-201ENSMUST00000025262 Ssh2Q5SW75 1423 aa30.07■■■□□ 2.4
Ltb-201ENSMUST00000025262 Myo5cE9Q1F5 1742 aa30.07■■■□□ 2.4
Ltb-201ENSMUST00000025262 Adgrb3Q80ZF8 1522 aa30.06■■■□□ 2.4
Ltb-201ENSMUST00000025262 Plekhh2Q8C115 1491 aa30.05■■■□□ 2.4
Ltb-201ENSMUST00000025262 Adgrl2Q8JZZ7 1487 aa30.05■■■□□ 2.4
Ltb-201ENSMUST00000025262 Tom1O88746 492 aa30.04■■■□□ 2.4
Ltb-201ENSMUST00000025262 Med1Q925J9 1575 aa30.03■■■□□ 2.4
Ltb-201ENSMUST00000025262 Cdk13Q69ZA1 1511 aaKnown RBP30.01■■■□□ 2.4
Ltb-201ENSMUST00000025262 Nyap1Q6PFX7 833 aa30■■■□□ 2.39
Ltb-201ENSMUST00000025262 Cabp1Q9JLK7 227 aa30■■■□□ 2.39
Ltb-201ENSMUST00000025262 ShprhQ7TPQ3 1674 aa29.98■■■□□ 2.39
Ltb-201ENSMUST00000025262 Hnrnpul2Q00PI9 745 aaKnown RBP29.98■■■□□ 2.39
Ltb-201ENSMUST00000025262 Cypt2Q6P924 180 aa29.98■■■□□ 2.39
Ltb-201ENSMUST00000025262 Slit2Q9R1B9 1521 aa29.96■■■□□ 2.39
Ltb-201ENSMUST00000025262 Kdm5aQ3UXZ9 1690 aa29.95■■■□□ 2.39
Ltb-201ENSMUST00000025262 Fhad1A6PWD2 1420 aa29.95■■■□□ 2.38
Ltb-201ENSMUST00000025262 Akap12Q9WTQ5 1684 aa29.93■■■□□ 2.38
Ltb-201ENSMUST00000025262 Mbd5B1AYB6 1498 aa29.92■■■□□ 2.38
Ltb-201ENSMUST00000025262 Pde4cQ3UEI1 686 aa29.91■■■□□ 2.38
Ltb-201ENSMUST00000025262 Txndc2Q6P902 515 aa29.9■■■□□ 2.38
Ltb-201ENSMUST00000025262 Brinp3Q499E0 766 aa29.89■■■□□ 2.38
Ltb-201ENSMUST00000025262 Eif2ak4Q9QZ05 1648 aa29.85■■■□□ 2.37
Ltb-201ENSMUST00000025262 Gimap5Q8BWF2 308 aa29.84■■■□□ 2.37
Ltb-201ENSMUST00000025262 Il16O54824 1322 aa29.84■■■□□ 2.37
Ltb-201ENSMUST00000025262 Itsn1Q9Z0R4 1714 aa29.83■■■□□ 2.37
Ltb-201ENSMUST00000025262 Chic2Q9D9G3 165 aa29.82■■■□□ 2.36
Ltb-201ENSMUST00000025262 Kif13aQ9EQW7 1749 aa29.82■■■□□ 2.36
Ltb-201ENSMUST00000025262 Thsd7aQ69ZU6 1645 aa29.8■■■□□ 2.36
Ltb-201ENSMUST00000025262 3425401B19RikD3Z1D3 1412 aa29.79■■■□□ 2.36
Ltb-201ENSMUST00000025262 Skint5A7XUY5 1461 aa29.78■■■□□ 2.36
Ltb-201ENSMUST00000025262 IghaA0A0A6YXW6 389 aa29.77■■■□□ 2.36
Ltb-201ENSMUST00000025262 Naip7Q9JIB3 1402 aa29.76■■■□□ 2.35
Ltb-201ENSMUST00000025262 Setd1aE9PYH6 1716 aa29.76■■■□□ 2.35
Ltb-201ENSMUST00000025262 Kif1bQ60575 1816 aaKnown RBP29.75■■■□□ 2.35
Ltb-201ENSMUST00000025262 Ttc21bQ0HA38 1315 aa29.74■■■□□ 2.35
Ltb-201ENSMUST00000025262 Col18a1P39061 1774 aa29.74■■■□□ 2.35
Ltb-201ENSMUST00000025262 Tmem131lQ3U3D7 1597 aa29.73■■■□□ 2.35
Ltb-201ENSMUST00000025262 Lmtk3Q5XJV6 1424 aa29.72■■■□□ 2.35
Ltb-201ENSMUST00000025262 Pik3c2aQ61194 1686 aa29.71■■■□□ 2.35
Ltb-201ENSMUST00000025262 Lamc1P02468 1607 aaKnown RBP29.71■■■□□ 2.35
Ltb-201ENSMUST00000025262 Fnbp4Q6ZQ03 1031 aa29.7■■■□□ 2.35
Ltb-201ENSMUST00000025262 Slc5a4bQ91ZP4 660 aa29.7■■■□□ 2.35
Ltb-201ENSMUST00000025262 Gm13695A2AK44 830 aa29.69■■■□□ 2.34
Ltb-201ENSMUST00000025262 Myo3aQ8K3H5 1613 aa29.69■■■□□ 2.34
Ltb-201ENSMUST00000025262 Kif21bQ9QXL1 1668 aa29.69■■■□□ 2.34
Ltb-201ENSMUST00000025262 P3h3Q8CG70 732 aa29.68■■■□□ 2.34
Ltb-201ENSMUST00000025262 Ttll13A4Q9F6 804 aa29.66■■■□□ 2.34
Ltb-201ENSMUST00000025262 Sema6bO54951 886 aa29.66■■■□□ 2.34
Ltb-201ENSMUST00000025262 Psme1P97371 249 aa29.65■■■□□ 2.34
Ltb-201ENSMUST00000025262 AnkarA2RT91 1465 aa29.64■■■□□ 2.34
Ltb-201ENSMUST00000025262 Evi5lH3BKQ3 813 aa29.64■■■□□ 2.34
Retrieved 100 of 22,080 RNA–protein pairs in 62.8 ms