RNA–Protein interactions for RNA: ENSMUST00000021039.11

Lig3-201, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Lig3, Length 5,957 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-201ENSMUST00000021039 Eif4g1Q6NZJ6 1600 aaKnown RBP10.48□□□□□ -0.73
Lig3-201ENSMUST00000021039 BC005561E9Q5E2 1589 aa10.48□□□□□ -0.73
Lig3-201ENSMUST00000021039 Mapkbp1Q6NS57 1503 aa10.48□□□□□ -0.73
Lig3-201ENSMUST00000021039 GphnQ8BUV3 769 aaKnown RBP10.48□□□□□ -0.73
Lig3-201ENSMUST00000021039 Naip2Q9QUK4 1447 aa10.47□□□□□ -0.73
Lig3-201ENSMUST00000021039 Znf316Q6PGE4 1016 aa10.47□□□□□ -0.73
Lig3-201ENSMUST00000021039 Pip4k2bQ80XI4 416 aa10.47□□□□□ -0.73
Lig3-201ENSMUST00000021039 Gm1043A0A140LJC2 1431 aa10.46□□□□□ -0.73
Lig3-201ENSMUST00000021039 Prex2Q3LAC4 1598 aa10.46□□□□□ -0.73
Lig3-201ENSMUST00000021039 Rfx7F8VPJ6 1459 aa10.46□□□□□ -0.73
Lig3-201ENSMUST00000021039 Cyb5rlB1AS42 316 aa10.46□□□□□ -0.74
Lig3-201ENSMUST00000021039 Rrbp1Q99PL5 1605 aaKnown RBP10.46□□□□□ -0.74
Lig3-201ENSMUST00000021039 Aplp2Q06335 707 aa10.46□□□□□ -0.74
Lig3-201ENSMUST00000021039 Sin3aQ60520 1274 aaKnown RBP10.46□□□□□ -0.74
Lig3-201ENSMUST00000021039 Abca5Q8K448 1642 aa10.46□□□□□ -0.74
Lig3-201ENSMUST00000021039 AI481877A2ALV5 1481 aa10.45□□□□□ -0.74
Lig3-201ENSMUST00000021039 Adamts12Q811B3 1600 aa10.45□□□□□ -0.74
Lig3-201ENSMUST00000021039 Dcaf11Q91VU6 549 aa10.43□□□□□ -0.74
Lig3-201ENSMUST00000021039 Erich3F6QRE9 1637 aa10.43□□□□□ -0.74
Lig3-201ENSMUST00000021039 Rangap1P46061 589 aaKnown RBP10.43□□□□□ -0.74
Lig3-201ENSMUST00000021039 Dapk1Q80YE7 1442 aa10.43□□□□□ -0.74
Lig3-201ENSMUST00000021039 Puf60Q3UEB3 564 aaKnown RBP10.43□□□□□ -0.74
Lig3-201ENSMUST00000021039 Q9D9H8 365 aa10.43□□□□□ -0.74
Lig3-201ENSMUST00000021039 Ttc21bQ0HA38 1315 aa10.43□□□□□ -0.74
Lig3-201ENSMUST00000021039 Myom3A2ABU4 1439 aa10.43□□□□□ -0.74
Lig3-201ENSMUST00000021039 Mink1Q9JM52 1308 aa10.42□□□□□ -0.74
Lig3-201ENSMUST00000021039 Anp32aO35381 247 aa10.42□□□□□ -0.74
Lig3-201ENSMUST00000021039 Slc4a1apE9PX68 744 aa10.42□□□□□ -0.74
Lig3-201ENSMUST00000021039 Cfap74Q3UY96 1578 aa10.42□□□□□ -0.74
Lig3-201ENSMUST00000021039 CatipB9EKE5 520 aa10.41□□□□□ -0.74
Lig3-201ENSMUST00000021039 Birc3O08863 600 aa10.41□□□□□ -0.74
Lig3-201ENSMUST00000021039 Map3k4O08648 1597 aa10.4□□□□□ -0.74
Lig3-201ENSMUST00000021039 Atf3Q60765 181 aa10.4□□□□□ -0.74
Lig3-201ENSMUST00000021039 Irx6Q9ER75 438 aa10.4□□□□□ -0.74
Lig3-201ENSMUST00000021039 Znf326O88291 580 aa10.39□□□□□ -0.75
Lig3-201ENSMUST00000021039 Bcl11bQ99PV8 884 aa10.39□□□□□ -0.75
Lig3-201ENSMUST00000021039 Peg3Q3URU2 1571 aa10.39□□□□□ -0.75
Lig3-201ENSMUST00000021039 Trappc8E9PWG2 1437 aa10.39□□□□□ -0.75
Lig3-201ENSMUST00000021039 Trim26Q99PN3 545 aa10.39□□□□□ -0.75
Lig3-201ENSMUST00000021039 Dhx9O70133 1380 aaKnown RBP10.38□□□□□ -0.75
Lig3-201ENSMUST00000021039 Ofd1Q80Z25 1017 aa10.38□□□□□ -0.75
Lig3-201ENSMUST00000021039 NudcO35685 332 aaKnown RBP10.38□□□□□ -0.75
Lig3-201ENSMUST00000021039 Fgd1P52734 960 aa10.38□□□□□ -0.75
Lig3-201ENSMUST00000021039 Gsto1O09131 240 aa10.38□□□□□ -0.75
Lig3-201ENSMUST00000021039 Abca16E9PWJ7 1678 aa10.37□□□□□ -0.75
Lig3-201ENSMUST00000021039 ArxO35085 564 aa10.37□□□□□ -0.75
Lig3-201ENSMUST00000021039 Atp2b2Q9R0K7 1198 aa10.36□□□□□ -0.75
Lig3-201ENSMUST00000021039 Ylpm1Q9R0I7 1386 aaKnown RBP10.36□□□□□ -0.75
Lig3-201ENSMUST00000021039 Rtf1A2AQ19 715 aaKnown RBP10.36□□□□□ -0.75
Lig3-201ENSMUST00000021039 Pank3Q8R2W9 370 aa10.36□□□□□ -0.75
Lig3-201ENSMUST00000021039 Cep170Q6A065 1588 aa10.36□□□□□ -0.75
Lig3-201ENSMUST00000021039 Slc52a2Q9D8F3 450 aa10.36□□□□□ -0.75
Lig3-201ENSMUST00000021039 FanciQ8K368 1330 aa10.36□□□□□ -0.75
Lig3-201ENSMUST00000021039 Neurod2Q62414 383 aa10.35□□□□□ -0.75
Lig3-201ENSMUST00000021039 Wwc2Q6NXJ0 1187 aa10.35□□□□□ -0.75
Lig3-201ENSMUST00000021039 Fam184bQ0KK56 942 aa10.35□□□□□ -0.75
Lig3-201ENSMUST00000021039 Fyb1O35601 819 aa10.35□□□□□ -0.75
Lig3-201ENSMUST00000021039 U2af1Q9D883 239 aaKnown RBP10.34□□□□□ -0.75
Lig3-201ENSMUST00000021039 Cabp4Q8VHC5 271 aa10.34□□□□□ -0.75
Lig3-201ENSMUST00000021039 Kdm5bQ80Y84 1544 aa10.33□□□□□ -0.76
Lig3-201ENSMUST00000021039 Gm38655A0A286YDK6 273 aa10.33□□□□□ -0.76
Lig3-201ENSMUST00000021039 Dennd4bQ3U1Y4 1499 aa10.32□□□□□ -0.76
Lig3-201ENSMUST00000021039 Adcy10Q8C0T9 1614 aa10.32□□□□□ -0.76
Lig3-201ENSMUST00000021039 Arhgef11Q68FM7 1552 aa10.32□□□□□ -0.76
Lig3-201ENSMUST00000021039 Evi5lH3BKQ3 813 aa10.32□□□□□ -0.76
Lig3-201ENSMUST00000021039 Zscan21Q07231 555 aa10.32□□□□□ -0.76
Lig3-201ENSMUST00000021039 Lmtk2Q3TYD6 1471 aa10.31□□□□□ -0.76
Lig3-201ENSMUST00000021039 Exoc6Q8R313 802 aa10.31□□□□□ -0.76
Lig3-201ENSMUST00000021039 DroshaQ5HZJ0 1373 aaKnown RBP10.31□□□□□ -0.76
Lig3-201ENSMUST00000021039 Hsp90aa1P07901 733 aaKnown RBP10.3□□□□□ -0.76
Lig3-201ENSMUST00000021039 Inpp5dQ9ES52 1191 aa10.3□□□□□ -0.76
Lig3-201ENSMUST00000021039 Abcc2Q8VI47 1543 aa10.3□□□□□ -0.76
Lig3-201ENSMUST00000021039 3425401B19RikD3Z1D3 1412 aa10.3□□□□□ -0.76
Lig3-201ENSMUST00000021039 Synj2Q9D2G5 1434 aa10.29□□□□□ -0.76
Lig3-201ENSMUST00000021039 Lmo7E9PYF4 1699 aaKnown RBP10.29□□□□□ -0.76
Lig3-201ENSMUST00000021039 Gm21190A0A0G2JGJ6 266 aa10.29□□□□□ -0.76
Lig3-201ENSMUST00000021039 Plin1Q8CGN5 517 aa10.29□□□□□ -0.76
Lig3-201ENSMUST00000021039 NpatQ8BMA5 1420 aa10.29□□□□□ -0.76
Lig3-201ENSMUST00000021039 Gm6268A2A3U9 297 aa10.29□□□□□ -0.76
Lig3-201ENSMUST00000021039 Golga2Q921M4 999 aa10.29□□□□□ -0.76
Lig3-201ENSMUST00000021039 Csrnp3P59055 597 aa10.29□□□□□ -0.76
Lig3-201ENSMUST00000021039 1700019A02RikA0A087WPV9 146 aa10.29□□□□□ -0.76
Lig3-201ENSMUST00000021039 Pak3Q61036 559 aa10.29□□□□□ -0.76
Lig3-201ENSMUST00000021039 Adgrl2Q8JZZ7 1487 aa10.28□□□□□ -0.76
Lig3-201ENSMUST00000021039 Sirt1Q923E4 737 aa10.28□□□□□ -0.76
Lig3-201ENSMUST00000021039 HnrnpmQ9D0E1 729 aaKnown RBP10.28□□□□□ -0.76
Lig3-201ENSMUST00000021039 Rab11fip3Q8CHD8 1047 aa10.27□□□□□ -0.76
Lig3-201ENSMUST00000021039 Kif7B7ZNG0 1348 aa10.27□□□□□ -0.77
Lig3-201ENSMUST00000021039 Zscan10Q3URR7 782 aa10.27□□□□□ -0.77
Lig3-201ENSMUST00000021039 Chmp4bQ9D8B3 224 aaKnown RBP10.27□□□□□ -0.77
Lig3-201ENSMUST00000021039 Dnmt1P13864 1620 aaKnown RBP10.27□□□□□ -0.77
Lig3-201ENSMUST00000021039 Arhgef40Q3UPH7 1517 aa10.26□□□□□ -0.77
Lig3-201ENSMUST00000021039 Calr4Q3TQS0 420 aa10.26□□□□□ -0.77
Lig3-201ENSMUST00000021039 PtprtQ99M80 1454 aa10.26□□□□□ -0.77
Lig3-201ENSMUST00000021039 Gli2Q0VGT2 1544 aa10.25□□□□□ -0.77
Lig3-201ENSMUST00000021039 Ssh2Q5SW75 1423 aa10.25□□□□□ -0.77
Lig3-201ENSMUST00000021039 Speer4f1Q9D5Q6 258 aa10.25□□□□□ -0.77
Lig3-201ENSMUST00000021039 Cdk19Q8BWD8 501 aa10.25□□□□□ -0.77
Lig3-201ENSMUST00000021039 Tsen2Q6P7W5 460 aa10.25□□□□□ -0.77
Lig3-201ENSMUST00000021039 Mak16Q8BGS0 296 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms