RNA–Protein interactions for RNA: ENSMUST00000006221.13

Vps54-201, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vps54, Length 4,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-201ENSMUST00000006221 Bcl11aQ9QYE3 773 aa15.28■□□□□ 0.04
Vps54-201ENSMUST00000006221 Lrriq1Q0P5X1 1673 aa15.28■□□□□ 0.04
Vps54-201ENSMUST00000006221 Jph4Q80WT0 628 aa15.28■□□□□ 0.04
Vps54-201ENSMUST00000006221 Ssh2Q5SW75 1423 aa15.27■□□□□ 0.04
Vps54-201ENSMUST00000006221 Cpsf1Q9EPU4 1441 aaKnown RBP15.27■□□□□ 0.04
Vps54-201ENSMUST00000006221 Caskin1Q6P9K8 1431 aa15.27■□□□□ 0.04
Vps54-201ENSMUST00000006221 Q7TT23 1179 aa15.27■□□□□ 0.04
Vps54-201ENSMUST00000006221 Polr3aB2RXC6 1390 aa15.26■□□□□ 0.03
Vps54-201ENSMUST00000006221 DroshaQ5HZJ0 1373 aaKnown RBP15.26■□□□□ 0.03
Vps54-201ENSMUST00000006221 PtprgQ05909 1442 aa15.24■□□□□ 0.03
Vps54-201ENSMUST00000006221 Trappc8E9PWG2 1437 aa15.24■□□□□ 0.03
Vps54-201ENSMUST00000006221 Fmn2Q9JL04 1578 aa15.24■□□□□ 0.03
Vps54-201ENSMUST00000006221 Iqgap1Q9JKF1 1657 aaKnown RBP15.23■□□□□ 0.03
Vps54-201ENSMUST00000006221 Zfp444Q3TDV8 331 aaKnown RBP15.23■□□□□ 0.03
Vps54-201ENSMUST00000006221 Pelp1Q9DBD5 1123 aaKnown RBP15.23■□□□□ 0.03
Vps54-201ENSMUST00000006221 Lrrc9Q8CDN9 1456 aa15.23■□□□□ 0.03
Vps54-201ENSMUST00000006221 Rock2P70336 1388 aa15.23■□□□□ 0.03
Vps54-201ENSMUST00000006221 Dnmt1P13864 1620 aaKnown RBP15.22■□□□□ 0.03
Vps54-201ENSMUST00000006221 Ttbk1Q6PCN3 1308 aa15.22■□□□□ 0.03
Vps54-201ENSMUST00000006221 Rad21Q61550 635 aaKnown RBP15.21■□□□□ 0.03
Vps54-201ENSMUST00000006221 Sart1Q9Z315 806 aaKnown RBP15.21■□□□□ 0.03
Vps54-201ENSMUST00000006221 AknaQ80VW7 1404 aa15.21■□□□□ 0.02
Vps54-201ENSMUST00000006221 Atp7aQ64430 1491 aa15.21■□□□□ 0.02
Vps54-201ENSMUST00000006221 Cd109Q8R422 1442 aa15.2■□□□□ 0.02
Vps54-201ENSMUST00000006221 Ifit1bl1D3Z6F0 470 aa15.2■□□□□ 0.02
Vps54-201ENSMUST00000006221 Fancd2Q80V62 1450 aa15.2■□□□□ 0.02
Vps54-201ENSMUST00000006221 Zscan21Q07231 555 aa15.2■□□□□ 0.02
Vps54-201ENSMUST00000006221 Rock1P70335 1354 aa15.2■□□□□ 0.02
Vps54-201ENSMUST00000006221 Fam208aQ69ZR9 1610 aaKnown RBP15.19■□□□□ 0.02
Vps54-201ENSMUST00000006221 Kank1E9Q238 1360 aa15.19■□□□□ 0.02
Vps54-201ENSMUST00000006221 Pank3Q8R2W9 370 aa15.18■□□□□ 0.02
Vps54-201ENSMUST00000006221 Tarbp1E9Q368 1579 aa15.18■□□□□ 0.02
Vps54-201ENSMUST00000006221 Adgrl2Q8JZZ7 1487 aa15.18■□□□□ 0.02
Vps54-201ENSMUST00000006221 DiexfQ8BTT6 772 aaKnown RBP15.18■□□□□ 0.02
Vps54-201ENSMUST00000006221 Inpp5dQ9ES52 1191 aa15.18■□□□□ 0.02
Vps54-201ENSMUST00000006221 Arhgap5P97393 1501 aa15.17■□□□□ 0.02
Vps54-201ENSMUST00000006221 Tcerg1Q8CGF7 1100 aaKnown RBP15.17■□□□□ 0.02
Vps54-201ENSMUST00000006221 Kdm5cP41230 1554 aa15.17■□□□□ 0.02
Vps54-201ENSMUST00000006221 Mak16Q8BGS0 296 aaKnown RBP15.16■□□□□ 0.02
Vps54-201ENSMUST00000006221 Rusc2Q80U22 1514 aa15.16■□□□□ 0.02
Vps54-201ENSMUST00000006221 PrxO55103 1391 aa15.15■□□□□ 0.02
Vps54-201ENSMUST00000006221 Clstn2Q9ER65 966 aa15.15■□□□□ 0.02
Vps54-201ENSMUST00000006221 Tubgcp6G5E8P0 1769 aa15.14■□□□□ 0.01
Vps54-201ENSMUST00000006221 Gapvd1Q6PAR5 1458 aa15.14■□□□□ 0.01
Vps54-201ENSMUST00000006221 Gm32742A0A1B0GT42 1604 aa15.13■□□□□ 0.01
Vps54-201ENSMUST00000006221 Anp32bQ9EST5 272 aaKnown RBP15.13■□□□□ 0.01
Vps54-201ENSMUST00000006221 Eif4g3Q80XI3 1579 aaKnown RBP15.12■□□□□ 0.01
Vps54-201ENSMUST00000006221 Adamts13Q769J6 1426 aa15.11■□□□□ 0.01
Vps54-201ENSMUST00000006221 Esx1O88933 382 aa15.1■□□□□ 0.01
Vps54-201ENSMUST00000006221 Rrbp1Q99PL5 1605 aaKnown RBP15.1■□□□□ 0.01
Vps54-201ENSMUST00000006221 Mroh3A0A1D5RM54 893 aa15.09■□□□□ 0.01
Vps54-201ENSMUST00000006221 Spag9Q58A65 1321 aaKnown RBP15.09■□□□□ 0.01
Vps54-201ENSMUST00000006221 Zscan10Q3URR7 782 aa15.08■□□□□ 0.01
Vps54-201ENSMUST00000006221 Map3k5O35099 1380 aa15.08■□□□□ 0.01
Vps54-201ENSMUST00000006221 Pde4cQ3UEI1 686 aa15.08■□□□□ 0
Vps54-201ENSMUST00000006221 Setd1aE9PYH6 1716 aa15.08■□□□□ 0
Vps54-201ENSMUST00000006221 Ipo9Q91YE6 1041 aa15.08■□□□□ 0
Vps54-201ENSMUST00000006221 Erich6D3Z6S9 713 aa15.07■□□□□ 0
Vps54-201ENSMUST00000006221 Kdm2aP59997 1161 aa15.07■□□□□ 0
Vps54-201ENSMUST00000006221 Zmym4A2A791 1549 aaKnown RBP15.06■□□□□ 0
Vps54-201ENSMUST00000006221 Edc4Q3UJB9 1406 aaKnown RBP15.06■□□□□ 0
Vps54-201ENSMUST00000006221 CrbnQ8C7D2 445 aa15.06■□□□□ 0
Vps54-201ENSMUST00000006221 Sall3Q62255 1320 aa15.06■□□□□ 0
Vps54-201ENSMUST00000006221 Slc4a1apE9PX68 744 aa15.06■□□□□ 0
Vps54-201ENSMUST00000006221 Mast1Q9R1L5 1570 aa15.05■□□□□ -0
Vps54-201ENSMUST00000006221 Fgd6Q69ZL1 1399 aa15.05■□□□□ -0
Vps54-201ENSMUST00000006221 Rnf17Q99MV7 1640 aa15.04■□□□□ -0
Vps54-201ENSMUST00000006221 NeflP08551 543 aa15.04■□□□□ -0
Vps54-201ENSMUST00000006221 Prkrip1Q9CWV6 186 aaKnown RBP15.04■□□□□ -0
Vps54-201ENSMUST00000006221 Ak9G3UYQ4 1894 aa15.04■□□□□ -0
Vps54-201ENSMUST00000006221 Plch2A2AP18 1501 aa15.04■□□□□ -0
Vps54-201ENSMUST00000006221 Tmf1B9EKI3 1091 aa15.03■□□□□ -0
Vps54-201ENSMUST00000006221 Cdc42bpbQ7TT50 1713 aa15.03■□□□□ -0
Vps54-201ENSMUST00000006221 Mink1Q9JM52 1308 aa15.03■□□□□ -0
Vps54-201ENSMUST00000006221 Gm14025A2AP89 1413 aa15.02■□□□□ -0
Vps54-201ENSMUST00000006221 Upf2A2AT37 1269 aaKnown RBP15.02■□□□□ -0
Vps54-201ENSMUST00000006221 Ppip5k1A2ARP1 1436 aa15.02■□□□□ -0
Vps54-201ENSMUST00000006221 Srcin1Q9QWI6 1250 aa15.01□□□□□ -0.01
Vps54-201ENSMUST00000006221 Pdcd11Q6NS46 1862 aaKnown RBP15.01□□□□□ -0.01
Vps54-201ENSMUST00000006221 AI481877A2ALV5 1481 aa15.01□□□□□ -0.01
Vps54-201ENSMUST00000006221 ChgaP26339 463 aaKnown RBP15.01□□□□□ -0.01
Vps54-201ENSMUST00000006221 Ppp2r1aQ76MZ3 589 aa15.01□□□□□ -0.01
Vps54-201ENSMUST00000006221 Tulp4Q9JIL5 1547 aa15.01□□□□□ -0.01
Vps54-201ENSMUST00000006221 Tex14Q7M6U3 1450 aa15.01□□□□□ -0.01
Vps54-201ENSMUST00000006221 Robo2Q7TPD3 1470 aa15□□□□□ -0.01
Vps54-201ENSMUST00000006221 Kif16bB1AVY7 1312 aa15□□□□□ -0.01
Vps54-201ENSMUST00000006221 Ccdc27Q3V036 639 aa14.99□□□□□ -0.01
Vps54-201ENSMUST00000006221 B4galnt3Q6L8S8 986 aa14.99□□□□□ -0.01
Vps54-201ENSMUST00000006221 Cep170Q6A065 1588 aa14.98□□□□□ -0.01
Vps54-201ENSMUST00000006221 Ttll13A4Q9F6 804 aa14.98□□□□□ -0.01
Vps54-201ENSMUST00000006221 Cfap74Q3UY96 1578 aa14.98□□□□□ -0.01
Vps54-201ENSMUST00000006221 Abcc3B2RX12 1523 aa14.98□□□□□ -0.01
Vps54-201ENSMUST00000006221 Prdm16A2A935 1275 aa14.97□□□□□ -0.01
Vps54-201ENSMUST00000006221 Apbb1Q9QXJ1 710 aa14.97□□□□□ -0.01
Vps54-201ENSMUST00000006221 Gm16486A0A1D5RMD1 1434 aa14.97□□□□□ -0.01
Vps54-201ENSMUST00000006221 Neurl4Q5NCX5 1563 aa14.97□□□□□ -0.01
Vps54-201ENSMUST00000006221 Fam184bQ0KK56 942 aa14.96□□□□□ -0.01
Vps54-201ENSMUST00000006221 Usp54Q8BL06 1588 aaKnown RBP14.95□□□□□ -0.02
Vps54-201ENSMUST00000006221 Znf608Q56A10 1511 aa14.95□□□□□ -0.02
Vps54-201ENSMUST00000006221 TnikP83510 1323 aa14.95□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms