RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C HST1P53685 503 aa3.35□□□□□ -1.87
SED5YLR026C YPL107WQ02873 248 aa3.35□□□□□ -1.87
SED5YLR026C NSE1Q07913 336 aa3.35□□□□□ -1.87
SED5YLR026C YPS3Q12303 508 aa3.35□□□□□ -1.87
SED5YLR026C ISA2Q12425 185 aa3.35□□□□□ -1.87
SED5YLR026C PCL9Q12477 304 aa3.35□□□□□ -1.87
SED5YLR026C YDR034W-BQ6Q5X2 51 aa3.35□□□□□ -1.87
SED5YLR026C PUT4P15380 627 aa3.34□□□□□ -1.87
SED5YLR026C GIT1P25346 518 aa3.34□□□□□ -1.87
SED5YLR026C WSS1P38838 269 aa3.34□□□□□ -1.87
SED5YLR026C HEM14P40012 539 aa3.34□□□□□ -1.87
SED5YLR026C AIP1P46680 615 aaKnown RBP3.34□□□□□ -1.87
SED5YLR026C ABM1P47146 123 aa3.34□□□□□ -1.87
SED5YLR026C YNL050CP53952 270 aa3.34□□□□□ -1.87
SED5YLR026C REX2P54964 269 aaKnown RBP3.34□□□□□ -1.87
SED5YLR026C SPC19Q03954 165 aa3.34□□□□□ -1.87
SED5YLR026C ASA1Q06822 443 aa3.34□□□□□ -1.87
SED5YLR026C SWI1P09547 1314 aa3.34□□□□□ -1.87
SED5YLR026C SAC3P46674 1301 aa3.34□□□□□ -1.87
SED5YLR026C STE7P06784 515 aa3.33□□□□□ -1.88
SED5YLR026C RPL12AP0CX53 165 aaKnown RBP3.33□□□□□ -1.88
SED5YLR026C RPL12BP0CX54 165 aa3.33□□□□□ -1.88
SED5YLR026C MDH1P17505 334 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
SED5YLR026C PHO91P27514 894 aa3.33□□□□□ -1.88
SED5YLR026C DBF4P32325 704 aa3.33□□□□□ -1.88
SED5YLR026C FMT1P32785 401 aa3.33□□□□□ -1.88
SED5YLR026C DOA1P36037 715 aa3.33□□□□□ -1.88
SED5YLR026C PFS2P42841 465 aaKnown RBP3.33□□□□□ -1.88
SED5YLR026C KEG1P43614 200 aa3.33□□□□□ -1.88
SED5YLR026C DCI1Q08558 271 aa3.33□□□□□ -1.88
SED5YLR026C PDE2P06776 526 aa3.32□□□□□ -1.88
SED5YLR026C ARF1P11076 181 aaKnown RBP3.32□□□□□ -1.88
SED5YLR026C YSC83P32792 385 aa3.32□□□□□ -1.88
SED5YLR026C PDC2P32896 925 aa3.32□□□□□ -1.88
SED5YLR026C SOL2P37262 315 aa3.32□□□□□ -1.88
SED5YLR026C SEH1P53011 349 aaKnown RBP3.32□□□□□ -1.88
SED5YLR026C VHT1P53241 593 aa3.32□□□□□ -1.88
SED5YLR026C YDR115WQ04598 105 aa3.32□□□□□ -1.88
SED5YLR026C TIR4Q12218 487 aaPredicted RBP3.32□□□□□ -1.88
SED5YLR026C BI3Q9ZZW7 517 aa3.32□□□□□ -1.88
SED5YLR026C TUS1Q06412 1307 aa3.32□□□□□ -1.88
SED5YLR026C MYO1P08964 1928 aa3.31□□□□□ -1.88
SED5YLR026C MOT1P32333 1867 aa3.31□□□□□ -1.88
SED5YLR026C TOA2P32774 122 aa3.31□□□□□ -1.88
SED5YLR026C YBL028CP38202 106 aa3.31□□□□□ -1.88
SED5YLR026C CHL4P38907 458 aa3.31□□□□□ -1.88
SED5YLR026C PEX22P39718 180 aa3.31□□□□□ -1.88
SED5YLR026C YFH7P43591 353 aa3.31□□□□□ -1.88
SED5YLR026C URC2Q04411 772 aa3.31□□□□□ -1.88
SED5YLR026C MSC3Q05812 728 aa3.31□□□□□ -1.88
SED5YLR026C RFM1Q12192 310 aa3.31□□□□□ -1.88
SED5YLR026C RPS18AP0CX55 146 aaKnown RBP3.3□□□□□ -1.88
SED5YLR026C RPS18BP0CX56 146 aaPredicted RBP3.3□□□□□ -1.88
SED5YLR026C CHA1P25379 360 aaKnown RBP3.3□□□□□ -1.88
SED5YLR026C LSM12P38828 187 aaKnown RBP3.3□□□□□ -1.88
SED5YLR026C MPP10P47083 593 aaKnown RBP3.3□□□□□ -1.88
SED5YLR026C TRF5P48561 642 aaKnown RBP3.3□□□□□ -1.88
SED5YLR026C PRP38Q00723 242 aaPredicted RBP3.3□□□□□ -1.88
SED5YLR026C PRP3Q03338 469 aaPredicted RBP3.3□□□□□ -1.88
SED5YLR026C YLR177WQ06251 628 aa3.3□□□□□ -1.88
SED5YLR026C YOR376WQ08900 122 aa3.3□□□□□ -1.88
SED5YLR026C GPM3Q12326 303 aa3.3□□□□□ -1.88
SED5YLR026C VMA2P16140 517 aaKnown RBP3.29□□□□□ -1.88
SED5YLR026C VAC7P53950 1165 aa3.29□□□□□ -1.88
SED5YLR026C IRA2P19158 3079 aa3.28□□□□□ -1.88
SED5YLR026C TPI1P00942 248 aaKnown RBP3.28□□□□□ -1.88
SED5YLR026C CUP1-1P0CX80 61 aa3.28□□□□□ -1.88
SED5YLR026C CUP1-2P0CX81 61 aa3.28□□□□□ -1.88
SED5YLR026C PTK1P36002 662 aaPredicted RBP3.28□□□□□ -1.88
SED5YLR026C RTR1P40084 226 aaPredicted RBP3.28□□□□□ -1.88
SED5YLR026C PAC11P40960 533 aa3.28□□□□□ -1.88
SED5YLR026C CIN2P46670 268 aa3.28□□□□□ -1.88
SED5YLR026C YDR061WQ12298 539 aa3.28□□□□□ -1.88
SED5YLR026C YDR524C-BQ3E6R4 66 aa3.28□□□□□ -1.88
SED5YLR026C MEX67Q99257 599 aaKnown RBP3.28□□□□□ -1.88
SED5YLR026C FHL1P39521 936 aa3.27□□□□□ -1.89
SED5YLR026C VEL1P53058 206 aa3.27□□□□□ -1.89
SED5YLR026C SLF1Q12034 447 aaKnown RBP3.27□□□□□ -1.89
SED5YLR026C HMS1Q12398 434 aa3.27□□□□□ -1.89
SED5YLR026C TEL1P38110 2787 aa3.26□□□□□ -1.89
SED5YLR026C RPS19AP07280 144 aaKnown RBP3.26□□□□□ -1.89
SED5YLR026C RPS19BP07281 144 aaPredicted RBP3.26□□□□□ -1.89
SED5YLR026C ASP3-2P0CX77 362 aa3.26□□□□□ -1.89
SED5YLR026C ASP3-3P0CX78 362 aa3.26□□□□□ -1.89
SED5YLR026C ASP3-4P0CX79 362 aa3.26□□□□□ -1.89
SED5YLR026C ASP3-1P0CZ17 362 aa3.26□□□□□ -1.89
SED5YLR026C MAS2P11914 482 aa3.26□□□□□ -1.89
SED5YLR026C MSP1P28737 362 aa3.26□□□□□ -1.89
SED5YLR026C ANP1P32629 500 aa3.26□□□□□ -1.89
SED5YLR026C TOA1P32773 286 aa3.26□□□□□ -1.89
SED5YLR026C LTV1P34078 463 aa3.26□□□□□ -1.89
SED5YLR026C SEC27P41811 889 aaKnown RBP3.26□□□□□ -1.89
SED5YLR026C MEH1Q02205 184 aa3.26□□□□□ -1.89
SED5YLR026C INM2Q05533 292 aa3.26□□□□□ -1.89
SED5YLR026C LDS2Q08218 356 aa3.26□□□□□ -1.89
SED5YLR026C FKS1P38631 1876 aaKnown RBP3.26□□□□□ -1.89
SED5YLR026C VMA8P32610 256 aaKnown RBP3.25□□□□□ -1.89
SED5YLR026C PRY2P36110 329 aa3.25□□□□□ -1.89
SED5YLR026C SMP1P38128 452 aa3.25□□□□□ -1.89
SED5YLR026C CTK3P46963 296 aaPredicted RBP3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms