RNA–Protein interactions for RNA: YKL110C

KTI12, Transcript of Protein that plays a role in modification of tRNA wobble nucleosides, yeast

Gene KTI12, Length 942 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KTI12	YKL110C	XYL2	Q07993	356 aa		4.71	□□□□□ -1.66
KTI12	YKL110C	RCN2	Q12044	265 aa		4.71	□□□□□ -1.66
KTI12	YKL110C	MED2	Q12124	431 aa		4.71	□□□□□ -1.66
KTI12	YKL110C	RPS21B	Q3E754	87 aa	Known RBP	4.71	□□□□□ -1.66
KTI12	YKL110C	REP1	P03871	373 aa		4.7	□□□□□ -1.66
KTI12	YKL110C	YOL163W	P0CF20	169 aa		4.7	□□□□□ -1.66
KTI12	YKL110C	HOM2	P13663	365 aa	Known RBP	4.7	□□□□□ -1.66
KTI12	YKL110C	THR1	P17423	357 aa	Known RBP	4.7	□□□□□ -1.66
KTI12	YKL110C	BUD5	P25300	642 aa	Predicted RBP	4.7	□□□□□ -1.66
KTI12	YKL110C	PTR2	P32901	601 aa		4.7	□□□□□ -1.66
KTI12	YKL110C	SRL3	P36167	246 aa		4.7	□□□□□ -1.66
KTI12	YKL110C	GPX2	P38143	162 aa		4.7	□□□□□ -1.66
KTI12	YKL110C	RTC2	P38279	296 aa		4.7	□□□□□ -1.66
KTI12	YKL110C	MNL1	P38888	796 aa		4.7	□□□□□ -1.66
KTI12	YKL110C	YHR219W	P38900	624 aa		4.7	□□□□□ -1.66
KTI12	YKL110C	ELO1	P39540	310 aa		4.7	□□□□□ -1.66
KTI12	YKL110C	ZRG8	P40021	1076 aa		4.7	□□□□□ -1.66
KTI12	YKL110C	STB1	P42845	420 aa		4.7	□□□□□ -1.66
KTI12	YKL110C	BPL1	P48445	690 aa	Predicted RBP	4.7	□□□□□ -1.66
KTI12	YKL110C	NUP57	P48837	541 aa		4.7	□□□□□ -1.66
KTI12	YKL110C	CWC23	P52868	283 aa	Predicted RBP	4.7	□□□□□ -1.66
KTI12	YKL110C	MAL11	P53048	616 aa		4.7	□□□□□ -1.66
KTI12	YKL110C	CPR8	P53728	308 aa		4.7	□□□□□ -1.66
KTI12	YKL110C	ABZ2	Q03266	374 aa		4.7	□□□□□ -1.66
KTI12	YKL110C	NAT4	Q04751	285 aa		4.7	□□□□□ -1.66
KTI12	YKL110C	NEJ1	Q06148	342 aa		4.7	□□□□□ -1.66
KTI12	YKL110C	NGL1	Q08213	363 aa	Known RBP	4.7	□□□□□ -1.66
KTI12	YKL110C	YOR019W	Q99248	730 aa		4.7	□□□□□ -1.66
KTI12	YKL110C	ERD1	P16151	362 aa		4.69	□□□□□ -1.66
KTI12	YKL110C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
KTI12	YKL110C	PRP2	P20095	876 aa	Predicted RBP	4.69	□□□□□ -1.66
KTI12	YKL110C	RPB5	P20434	215 aa		4.69	□□□□□ -1.66
KTI12	YKL110C	IDP1	P21954	428 aa	Known RBP	4.69	□□□□□ -1.66
KTI12	YKL110C	TAH1	P25638	111 aa	Predicted RBP	4.69	□□□□□ -1.66
KTI12	YKL110C	YMC1	P32331	307 aa		4.69	□□□□□ -1.66
KTI12	YKL110C	CDC12	P32468	407 aa	Known RBP	4.69	□□□□□ -1.66
KTI12	YKL110C	ARC19	P33204	171 aa	Known RBP	4.69	□□□□□ -1.66
KTI12	YKL110C	MOH1	P38191	138 aa		4.69	□□□□□ -1.66
KTI12	YKL110C	YHR112C	P38716	378 aa		4.69	□□□□□ -1.66
KTI12	YKL110C	ECM34	P38728	170 aa		4.69	□□□□□ -1.66
KTI12	YKL110C	YHK8	P38776	514 aa		4.69	□□□□□ -1.66
KTI12	YKL110C	PZF1	P39933	429 aa		4.69	□□□□□ -1.66
KTI12	YKL110C	YEL068C	P39977	110 aa		4.69	□□□□□ -1.66
KTI12	YKL110C	IRC6	P43615	237 aa		4.69	□□□□□ -1.66
KTI12	YKL110C	COS1	P53822	381 aa		4.69	□□□□□ -1.66
KTI12	YKL110C	YSA1	Q01976	231 aa		4.69	□□□□□ -1.66
KTI12	YKL110C	YPL068C	Q02749	293 aa		4.69	□□□□□ -1.66
KTI12	YKL110C	SNZ1	Q03148	297 aa		4.69	□□□□□ -1.66
KTI12	YKL110C	INP1	Q03694	420 aa		4.69	□□□□□ -1.66
KTI12	YKL110C	OST6	Q03723	332 aa		4.69	□□□□□ -1.66
KTI12	YKL110C	YLR446W	Q06204	433 aa		4.69	□□□□□ -1.66
KTI12	YKL110C	MDM36	Q06820	579 aa		4.69	□□□□□ -1.66
KTI12	YKL110C	SKI7	Q08491	747 aa	Predicted RBP	4.69	□□□□□ -1.66
KTI12	YKL110C	FRE5	Q08908	694 aa		4.69	□□□□□ -1.66
KTI12	YKL110C	THP3	Q12049	470 aa	Known RBP	4.69	□□□□□ -1.66
KTI12	YKL110C	ACF2	Q12168	779 aa		4.69	□□□□□ -1.66
KTI12	YKL110C	RRP12	Q12754	1228 aa	Known RBP	4.69	□□□□□ -1.66
KTI12	YKL110C	CYR1	P08678	2026 aa	Known RBP	4.68	□□□□□ -1.66
KTI12	YKL110C	YOL162W	P0CF19	215 aa		4.68	□□□□□ -1.66
KTI12	YKL110C	CBS1	P14066	229 aa		4.68	□□□□□ -1.66
KTI12	YKL110C	SNF6	P18888	332 aa		4.68	□□□□□ -1.66
KTI12	YKL110C	MCK1	P21965	375 aa	Known RBP	4.68	□□□□□ -1.66
KTI12	YKL110C	CMK1	P27466	446 aa	Known RBP	4.68	□□□□□ -1.66
KTI12	YKL110C	ALG3	P38179	458 aa		4.68	□□□□□ -1.66
KTI12	YKL110C	YHR097C	P38809	366 aa	Known RBP	4.68	□□□□□ -1.66
KTI12	YKL110C	ANS1	P38832	159 aa		4.68	□□□□□ -1.66
KTI12	YKL110C	FMO1	P38866	432 aa		4.68	□□□□□ -1.66
KTI12	YKL110C	MDM31	P38880	579 aa		4.68	□□□□□ -1.66
KTI12	YKL110C	ALP1	P38971	573 aa		4.68	□□□□□ -1.66
KTI12	YKL110C	MIT1	P40002	666 aa		4.68	□□□□□ -1.66
KTI12	YKL110C	FMP52	P40008	231 aa		4.68	□□□□□ -1.66
KTI12	YKL110C	DDI1	P40087	428 aa		4.68	□□□□□ -1.66
KTI12	YKL110C	YPS6	P40583	537 aa		4.68	□□□□□ -1.66
KTI12	YKL110C	YFL054C	P43549	646 aa		4.68	□□□□□ -1.66
KTI12	YKL110C	CHA4	P43634	648 aa		4.68	□□□□□ -1.66
KTI12	YKL110C	YJL055W	P47044	245 aa		4.68	□□□□□ -1.66
KTI12	YKL110C	HOC1	P47124	396 aa		4.68	□□□□□ -1.66
KTI12	YKL110C	IBA57	P47158	497 aa		4.68	□□□□□ -1.66
KTI12	YKL110C	IMD3	P50095	523 aa	Known RBP	4.68	□□□□□ -1.66
KTI12	YKL110C	EXG2	P52911	562 aa		4.68	□□□□□ -1.66
KTI12	YKL110C	MRH4	P53166	561 aa		4.68	□□□□□ -1.66
KTI12	YKL110C	FIN1	Q03898	291 aa		4.68	□□□□□ -1.66
KTI12	YKL110C	ELP6	Q04868	273 aa		4.68	□□□□□ -1.66
KTI12	YKL110C	YPS7	Q06325	596 aa		4.68	□□□□□ -1.66
KTI12	YKL110C	THI73	Q07904	523 aa		4.68	□□□□□ -1.66
KTI12	YKL110C	NOP12	Q08208	459 aa	Known RBP	4.68	□□□□□ -1.66
KTI12	YKL110C	CRT10	Q08226	957 aa		4.68	□□□□□ -1.66
KTI12	YKL110C	PEX27	Q08580	376 aa		4.68	□□□□□ -1.66
KTI12	YKL110C	FDH1	Q08911	376 aa		4.68	□□□□□ -1.66
KTI12	YKL110C	SPC3	Q12133	184 aa		4.68	□□□□□ -1.66
KTI12	YKL110C	YDR262W	Q12331	272 aa		4.68	□□□□□ -1.66
KTI12	YKL110C	YKL033W-A	Q86ZR7	236 aa		4.68	□□□□□ -1.66
KTI12	YKL110C	GAL4	P04386	881 aa		4.67	□□□□□ -1.66
KTI12	YKL110C	AAC3	P18238	307 aa		4.67	□□□□□ -1.66
KTI12	YKL110C	HOP1	P20050	605 aa		4.67	□□□□□ -1.66
KTI12	YKL110C	PTP1	P25044	335 aa		4.67	□□□□□ -1.66
KTI12	YKL110C	ACH1	P32316	526 aa		4.67	□□□□□ -1.66
KTI12	YKL110C	HIR2	P32480	875 aa		4.67	□□□□□ -1.66
KTI12	YKL110C	SRB5	P32585	307 aa		4.67	□□□□□ -1.66
KTI12	YKL110C	MSN2	P33748	704 aa		4.67	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms