RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C NDC80P40460 691 aa1.85□□□□□ -2.11
RTT101YJL047C YRB1P41920 201 aaKnown RBP1.85□□□□□ -2.11
RTT101YJL047C SOL4P53315 255 aa1.85□□□□□ -2.11
RTT101YJL047C CPR8P53728 308 aa1.85□□□□□ -2.11
RTT101YJL047C SMX3P54999 86 aaPredicted RBP1.85□□□□□ -2.11
RTT101YJL047C RHO4Q00246 291 aa1.85□□□□□ -2.11
RTT101YJL047C KRE28Q04431 385 aa1.85□□□□□ -2.11
RTT101YJL047C CSM3Q04659 317 aa1.85□□□□□ -2.11
RTT101YJL047C YOR389WQ08912 624 aa1.85□□□□□ -2.11
RTT101YJL047C AI5_BETAQ9ZZX0 354 aa1.85□□□□□ -2.11
RTT101YJL047C HIS4P00815 799 aaKnown RBP1.84□□□□□ -2.11
RTT101YJL047C ALG7P07286 448 aa1.84□□□□□ -2.11
RTT101YJL047C MKK1P32490 508 aa1.84□□□□□ -2.11
RTT101YJL047C PDR3P33200 976 aa1.84□□□□□ -2.11
RTT101YJL047C PPZ2P33329 710 aa1.84□□□□□ -2.11
RTT101YJL047C YCR041WP37265 110 aa1.84□□□□□ -2.11
RTT101YJL047C CBP4P37267 147 aa1.84□□□□□ -2.11
RTT101YJL047C BMT2P38278 337 aa1.84□□□□□ -2.11
RTT101YJL047C EXO1P39875 702 aa1.84□□□□□ -2.11
RTT101YJL047C GAB1P41733 394 aa1.84□□□□□ -2.11
RTT101YJL047C YFR057WP43625 151 aa1.84□□□□□ -2.11
RTT101YJL047C ASN1P49089 572 aaKnown RBP1.84□□□□□ -2.11
RTT101YJL047C GET1P53192 235 aa1.84□□□□□ -2.11
RTT101YJL047C LST7P53237 242 aa1.84□□□□□ -2.11
RTT101YJL047C YPL034WQ03083 165 aa1.84□□□□□ -2.11
RTT101YJL047C MSS11Q03825 758 aa1.84□□□□□ -2.11
RTT101YJL047C VBA1Q04301 562 aa1.84□□□□□ -2.11
RTT101YJL047C GFD1Q04839 188 aaKnown RBP1.84□□□□□ -2.11
RTT101YJL047C YDL218WQ07629 317 aa1.84□□□□□ -2.11
RTT101YJL047C MED7Q08278 222 aa1.84□□□□□ -2.11
RTT101YJL047C SRL2Q12020 392 aa1.84□□□□□ -2.11
RTT101YJL047C EDE1P34216 1381 aa1.84□□□□□ -2.11
RTT101YJL047C HIS1P00498 297 aaKnown RBP1.84□□□□□ -2.12
RTT101YJL047C RPP0P05317 312 aaKnown RBP1.84□□□□□ -2.12
RTT101YJL047C RPS13P05756 151 aaKnown RBP1.84□□□□□ -2.12
RTT101YJL047C AQY1P0CD91 305 aa1.84□□□□□ -2.12
RTT101YJL047C NAM2P11325 894 aa1.84□□□□□ -2.12
RTT101YJL047C ARF2P19146 181 aaKnown RBP1.84□□□□□ -2.12
RTT101YJL047C POF1P25576 258 aa1.84□□□□□ -2.12
RTT101YJL047C IDH1P28834 360 aaKnown RBP RIP-Chip data1.84□□□□□ -2.12not detected
RTT101YJL047C UTR4P32626 227 aa1.84□□□□□ -2.12
RTT101YJL047C ATO2P32907 282 aa1.84□□□□□ -2.12
RTT101YJL047C VPS51P36116 164 aa1.84□□□□□ -2.12
RTT101YJL047C CHK1P38147 527 aa1.84□□□□□ -2.12
RTT101YJL047C RFT1P38206 574 aaPredicted RBP1.84□□□□□ -2.12
RTT101YJL047C PRS2P38620 318 aaKnown RBP1.84□□□□□ -2.12
RTT101YJL047C PCL5P38794 229 aa1.84□□□□□ -2.12
RTT101YJL047C DHH1P39517 506 aaKnown RBP1.84□□□□□ -2.12
RTT101YJL047C FRT2P39734 528 aa1.84□□□□□ -2.12
RTT101YJL047C RPH1P39956 796 aa1.84□□□□□ -2.12
RTT101YJL047C ARG2P40360 574 aa1.84□□□□□ -2.12
RTT101YJL047C YIP1P53039 248 aa1.84□□□□□ -2.12
RTT101YJL047C GPI1P53306 609 aa1.84□□□□□ -2.12
RTT101YJL047C SSU72P53538 206 aaPredicted RBP1.84□□□□□ -2.12
RTT101YJL047C VAC7P53950 1165 aa1.84□□□□□ -2.12
RTT101YJL047C SLD5Q03406 294 aa1.84□□□□□ -2.12
RTT101YJL047C GIS1Q03833 894 aa1.84□□□□□ -2.12
RTT101YJL047C ATG17Q06410 417 aa1.84□□□□□ -2.12
RTT101YJL047C NDE2Q07500 545 aa1.84□□□□□ -2.12
RTT101YJL047C PLB3Q08108 686 aa1.84□□□□□ -2.12
RTT101YJL047C POM33Q12164 279 aa1.84□□□□□ -2.12
RTT101YJL047C RGT2Q12300 763 aa1.84□□□□□ -2.12
RTT101YJL047C MEX67Q99257 599 aaKnown RBP1.84□□□□□ -2.12
RTT101YJL047C SAL1D6W196 494 aa1.83□□□□□ -2.12
RTT101YJL047C TEF1P02994 458 aaKnown RBP1.83□□□□□ -2.12
RTT101YJL047C HEM1P09950 548 aaPredicted RBP1.83□□□□□ -2.12
RTT101YJL047C SSC1P0CS90 654 aaKnown RBP1.83□□□□□ -2.12
RTT101YJL047C RPS24AP0CX31 135 aaKnown RBP1.83□□□□□ -2.12
RTT101YJL047C RPS24BP0CX32 135 aaKnown RBP1.83□□□□□ -2.12
RTT101YJL047C BMH1P29311 267 aaKnown RBP1.83□□□□□ -2.12
RTT101YJL047C NUP2P32499 720 aa1.83□□□□□ -2.12
RTT101YJL047C NDC1P32500 655 aa1.83□□□□□ -2.12
RTT101YJL047C MNS1P32906 549 aa1.83□□□□□ -2.12
RTT101YJL047C PRX1P34227 261 aaKnown RBP1.83□□□□□ -2.12
RTT101YJL047C YKL187CP34231 750 aa1.83□□□□□ -2.12
RTT101YJL047C FLO10P36170 1169 aa1.83□□□□□ -2.12
RTT101YJL047C YBR056WP38081 501 aa1.83□□□□□ -2.12
RTT101YJL047C YBR241CP38142 488 aa1.83□□□□□ -2.12
RTT101YJL047C MRX3P38172 270 aa1.83□□□□□ -2.12
RTT101YJL047C AME1P38313 324 aa1.83□□□□□ -2.12
RTT101YJL047C LYS1P38998 373 aaRIP-Chip data1.83□□□□□ -2.12not detected
RTT101YJL047C MET30P39014 640 aa1.83□□□□□ -2.12
RTT101YJL047C PHO90P39535 881 aa1.83□□□□□ -2.12
RTT101YJL047C SMB1P40018 196 aaKnown RBP1.83□□□□□ -2.12
RTT101YJL047C THO1P40040 218 aaKnown RBP1.83□□□□□ -2.12
RTT101YJL047C DDI1P40087 428 aa1.83□□□□□ -2.12
RTT101YJL047C ALG8P40351 577 aa1.83□□□□□ -2.12
RTT101YJL047C POG1P40473 351 aa1.83□□□□□ -2.12
RTT101YJL047C TMA22P47089 198 aaPredicted RBP1.83□□□□□ -2.12
RTT101YJL047C MGA1P53050 456 aa1.83□□□□□ -2.12
RTT101YJL047C CDH1P53197 566 aa1.83□□□□□ -2.12
RTT101YJL047C COS1P53822 381 aa1.83□□□□□ -2.12
RTT101YJL047C YNL040WP53960 456 aaPredicted RBP1.83□□□□□ -2.12
RTT101YJL047C RNT1Q02555 471 aa1.83□□□□□ -2.12
RTT101YJL047C SKI7Q08491 747 aaPredicted RBP1.83□□□□□ -2.12
RTT101YJL047C YOP1Q12402 180 aa1.83□□□□□ -2.12
RTT101YJL047C RPB8P20436 146 aa1.83□□□□□ -2.12
RTT101YJL047C YCR102CP25608 368 aa1.83□□□□□ -2.12
RTT101YJL047C COX13P32799 129 aa1.83□□□□□ -2.12
RTT101YJL047C ZRT1P32804 376 aa1.83□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms