RNA–Protein interactions for RNA: YBR106W

PHO88, Transcript of Probable membrane protein, yeast

Gene PHO88, Length 567 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PHO88	YBR106W	DCC1	P25559	380 aa		3.13	□□□□□ -1.91
PHO88	YBR106W	ITR1	P30605	584 aa		3.13	□□□□□ -1.91
PHO88	YBR106W	ITR2	P30606	609 aa		3.13	□□□□□ -1.91
PHO88	YBR106W	ASF2	P32448	525 aa	Predicted RBP	3.13	□□□□□ -1.91
PHO88	YBR106W	DPH5	P32469	300 aa	Predicted RBP	3.13	□□□□□ -1.91
PHO88	YBR106W	DOA4	P32571	926 aa		3.13	□□□□□ -1.91
PHO88	YBR106W	TOA2	P32774	122 aa		3.13	□□□□□ -1.91
PHO88	YBR106W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
PHO88	YBR106W	YKR015C	P36111	568 aa		3.13	□□□□□ -1.91
PHO88	YBR106W	SWC5	P38326	303 aa		3.13	□□□□□ -1.91
PHO88	YBR106W	YMR262W	P38430	313 aa		3.13	□□□□□ -1.91
PHO88	YBR106W	DHH1	P39517	506 aa	Known RBP	3.13	□□□□□ -1.91
PHO88	YBR106W	BTT1	P40314	149 aa	Predicted RBP	3.13	□□□□□ -1.91
PHO88	YBR106W	OST1	P41543	476 aa	Known RBP	3.13	□□□□□ -1.91
PHO88	YBR106W	HAC1	P41546	238 aa		3.13	□□□□□ -1.91
PHO88	YBR106W	PMT5	P52867	743 aa		3.13	□□□□□ -1.91
PHO88	YBR106W	GOR1	P53839	350 aa		3.13	□□□□□ -1.91
PHO88	YBR106W	CUR1	Q06469	252 aa		3.13	□□□□□ -1.91
PHO88	YBR106W	ARR2	Q06597	130 aa		3.13	□□□□□ -1.91
PHO88	YBR106W	MRPL35	Q06678	367 aa		3.13	□□□□□ -1.91
PHO88	YBR106W	ESA1	Q08649	445 aa		3.13	□□□□□ -1.91
PHO88	YBR106W	EAF3	Q12432	401 aa		3.13	□□□□□ -1.91
PHO88	YBR106W	AHC1	Q12433	566 aa		3.13	□□□□□ -1.91
PHO88	YBR106W	ADF1	Q2V2Q1	113 aa		3.13	□□□□□ -1.91
PHO88	YBR106W	HHF1	P02309	103 aa	Known RBP	3.12	□□□□□ -1.91
PHO88	YBR106W	RPB5	P20434	215 aa		3.12	□□□□□ -1.91
PHO88	YBR106W	CKI1	P20485	582 aa		3.12	□□□□□ -1.91
PHO88	YBR106W	RPT5	P33297	434 aa	Known RBP	3.12	□□□□□ -1.91
PHO88	YBR106W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
PHO88	YBR106W	PTK1	P36002	662 aa	Predicted RBP	3.12	□□□□□ -1.91
PHO88	YBR106W	SMC2	P38989	1170 aa	Known RBP	3.12	□□□□□ -1.91
PHO88	YBR106W	YDL186W	P48568	277 aa		3.12	□□□□□ -1.91
PHO88	YBR106W	YGL242C	P53066	181 aa		3.12	□□□□□ -1.91
PHO88	YBR106W	HOP2	P53187	214 aa		3.12	□□□□□ -1.91
PHO88	YBR106W	CLD1	P53264	445 aa		3.12	□□□□□ -1.91
PHO88	YBR106W	RRN9	P53437	365 aa		3.12	□□□□□ -1.91
PHO88	YBR106W	YNL050C	P53952	270 aa		3.12	□□□□□ -1.91
PHO88	YBR106W	RVB1	Q03940	463 aa	Known RBP	3.12	□□□□□ -1.91
PHO88	YBR106W	AIM33	Q04516	312 aa		3.12	□□□□□ -1.91
PHO88	YBR106W	RRG8	Q06109	277 aa		3.12	□□□□□ -1.91
PHO88	YBR106W	YDL114W	Q07530	308 aa		3.12	□□□□□ -1.91
PHO88	YBR106W	THP3	Q12049	470 aa	Known RBP	3.12	□□□□□ -1.91
PHO88	YBR106W	HMS1	Q12398	434 aa		3.12	□□□□□ -1.91
PHO88	YBR106W	PCL9	Q12477	304 aa		3.12	□□□□□ -1.91
PHO88	YBR106W	PDR5	P33302	1511 aa	Known RBP	3.12	□□□□□ -1.91
PHO88	YBR106W	GDH1	P07262	454 aa	Known RBP	3.11	□□□□□ -1.91
PHO88	YBR106W	CAR2	P07991	424 aa	Known RBP	3.11	□□□□□ -1.91
PHO88	YBR106W	RPL18A	P0CX49	186 aa	Known RBP	3.11	□□□□□ -1.91
PHO88	YBR106W	RPL18B	P0CX50	186 aa	Known RBP	3.11	□□□□□ -1.91
PHO88	YBR106W	UGA1	P17649	471 aa		3.11	□□□□□ -1.91
PHO88	YBR106W	MXR2	P25566	168 aa		3.11	□□□□□ -1.91
PHO88	YBR106W	ERG9	P29704	444 aa		3.11	□□□□□ -1.91
PHO88	YBR106W	RPC25	P35718	212 aa		3.11	□□□□□ -1.91
PHO88	YBR106W	KDX1	P36005	433 aa		3.11	□□□□□ -1.91
PHO88	YBR106W	YHK8	P38776	514 aa		3.11	□□□□□ -1.91
PHO88	YBR106W	SIM1	P40472	476 aa		3.11	□□□□□ -1.91
PHO88	YBR106W	WWM1	P43582	211 aa	Known RBP	3.11	□□□□□ -1.91
PHO88	YBR106W	AIM24	P47127	394 aa		3.11	□□□□□ -1.91
PHO88	YBR106W	EMC2	P47133	292 aa	Known RBP	3.11	□□□□□ -1.91
PHO88	YBR106W	HXT11	P54862	567 aa		3.11	□□□□□ -1.91
PHO88	YBR106W	SPO19	Q03029	223 aa		3.11	□□□□□ -1.91
PHO88	YBR106W	YML122C	Q03207	126 aa		3.11	□□□□□ -1.91
PHO88	YBR106W	ECM18	Q04623	453 aa		3.11	□□□□□ -1.91
PHO88	YBR106W	ERV41	Q04651	352 aa		3.11	□□□□□ -1.91
PHO88	YBR106W	KAP95	Q06142	861 aa	Known RBP	3.11	□□□□□ -1.91
PHO88	YBR106W	ICT1	Q12385	394 aa		3.11	□□□□□ -1.91
PHO88	YBR106W	AIM45	Q12480	344 aa	Known RBP	3.11	□□□□□ -1.91
PHO88	YBR106W	IKI3	Q06706	1349 aa	Known RBP	3.11	□□□□□ -1.91
PHO88	YBR106W	STE2	D6VTK4	431 aa		3.1	□□□□□ -1.91
PHO88	YBR106W	RPL24A	P04449	155 aa	Known RBP	3.1	□□□□□ -1.91
PHO88	YBR106W	SSC1	P0CS90	654 aa	Known RBP	3.1	□□□□□ -1.91
PHO88	YBR106W	UNG1	P12887	359 aa		3.1	□□□□□ -1.91
PHO88	YBR106W	PRR1	P28708	518 aa		3.1	□□□□□ -1.91
PHO88	YBR106W	ARO2	P28777	376 aa	Known RBP	3.1	□□□□□ -1.91
PHO88	YBR106W	PHA2	P32452	334 aa		3.1	□□□□□ -1.91
PHO88	YBR106W	MSN4	P33749	630 aa		3.1	□□□□□ -1.91
PHO88	YBR106W	MRPS5	P33759	307 aa		3.1	□□□□□ -1.91
PHO88	YBR106W	YPT53	P36019	220 aa		3.1	□□□□□ -1.91
PHO88	YBR106W	YBR139W	P38109	508 aa		3.1	□□□□□ -1.91
PHO88	YBR106W	GPX2	P38143	162 aa		3.1	□□□□□ -1.91
PHO88	YBR106W	CDC40	P40968	455 aa	Predicted RBP	3.1	□□□□□ -1.91
PHO88	YBR106W	KEG1	P43614	200 aa		3.1	□□□□□ -1.91
PHO88	YBR106W	COX16	P47081	118 aa		3.1	□□□□□ -1.91
PHO88	YBR106W	GTO1	P48239	356 aa		3.1	□□□□□ -1.91
PHO88	YBR106W	TRF5	P48561	642 aa	Known RBP	3.1	□□□□□ -1.91
PHO88	YBR106W	TAF6	P53040	516 aa		3.1	□□□□□ -1.91
PHO88	YBR106W	MRM2	P53123	320 aa		3.1	□□□□□ -1.91
PHO88	YBR106W	LST7	P53237	242 aa		3.1	□□□□□ -1.91
PHO88	YBR106W	CWC25	P53854	179 aa	Known RBP	3.1	□□□□□ -1.91
PHO88	YBR106W	GIM3	P53900	129 aa		3.1	□□□□□ -1.91
PHO88	YBR106W	SMP3	Q04174	516 aa		3.1	□□□□□ -1.91
PHO88	YBR106W	NAT4	Q04751	285 aa		3.1	□□□□□ -1.91
PHO88	YBR106W	BUR2	Q05949	395 aa		3.1	□□□□□ -1.91
PHO88	YBR106W	VAC14	Q06708	880 aa		3.1	□□□□□ -1.91
PHO88	YBR106W	YGK3	Q12222	375 aa	Predicted RBP	3.1	□□□□□ -1.91
PHO88	YBR106W	GIS3	Q12418	502 aa		3.1	□□□□□ -1.91
PHO88	YBR106W	TDH1	P00360	332 aa	Known RBP	3.09	□□□□□ -1.91
PHO88	YBR106W	SSA3	P09435	649 aa	Known RBP	3.09	□□□□□ -1.91
PHO88	YBR106W	RNA14	P25298	677 aa	Known RBP	3.09	□□□□□ -1.91
PHO88	YBR106W	CIN8	P27895	1000 aa		3.09	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 39.4 ms