RNA–Protein interactions for RNA: RDN18-2

RDN18-2, Transcript of 18S ribosomal RNA (18S rRNA), yeastyeast

Gene RDN18-2, Length 1,800 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN18-2RDN18-2 BUR2Q05949 395 aa9.45□□□□□ -0.9
RDN18-2RDN18-2 PHO92Q06390 306 aa9.45□□□□□ -0.9
RDN18-2RDN18-2 NBA1Q08229 501 aaKnown RBP9.45□□□□□ -0.9
RDN18-2RDN18-2 ENV7Q12003 364 aa9.45□□□□□ -0.9
RDN18-2RDN18-2 YOR289WQ12012 251 aaPredicted RBP9.45□□□□□ -0.9
RDN18-2RDN18-2 GLO4Q12320 285 aa9.45□□□□□ -0.9
RDN18-2RDN18-2 YOL114CQ12322 202 aa9.45□□□□□ -0.9
RDN18-2RDN18-2 SCM3Q12334 223 aa9.45□□□□□ -0.9
RDN18-2RDN18-2 LAG2Q92325 660 aa9.45□□□□□ -0.9
RDN18-2RDN18-2 MEX67Q99257 599 aaKnown RBP9.45□□□□□ -0.9
RDN18-2RDN18-2 PRE7P23724 241 aaKnown RBP9.44□□□□□ -0.9
RDN18-2RDN18-2 PTP1P25044 335 aa9.44□□□□□ -0.9
RDN18-2RDN18-2 RNP1P32385 249 aa9.44□□□□□ -0.9
RDN18-2RDN18-2 CDC12P32468 407 aaKnown RBP9.44□□□□□ -0.9
RDN18-2RDN18-2 ECM15P35195 104 aa9.44□□□□□ -0.9
RDN18-2RDN18-2 YBR063CP38083 404 aa9.44□□□□□ -0.9
RDN18-2RDN18-2 ANS1P38832 159 aa9.44□□□□□ -0.9
RDN18-2RDN18-2 MDV1P47025 714 aa9.44□□□□□ -0.9
RDN18-2RDN18-2 PPT1P53043 513 aa9.44□□□□□ -0.9
RDN18-2RDN18-2 TPN1P53099 579 aa9.44□□□□□ -0.9
RDN18-2RDN18-2 SWS2P53937 143 aa9.44□□□□□ -0.9
RDN18-2RDN18-2 PLB2Q03674 706 aa9.44□□□□□ -0.9
RDN18-2RDN18-2 FPS1P23900 669 aa9.43□□□□□ -0.9
RDN18-2RDN18-2 ATG22P25568 528 aa9.43□□□□□ -0.9
RDN18-2RDN18-2 ELO1P39540 310 aa9.43□□□□□ -0.9
RDN18-2RDN18-2 ERV29P53337 310 aa9.43□□□□□ -0.9
RDN18-2RDN18-2 RGC1Q06108 1083 aaKnown RBP9.43□□□□□ -0.9
RDN18-2RDN18-2 GPN3Q06543 272 aa9.43□□□□□ -0.9
RDN18-2RDN18-2 YPL199CQ08954 240 aa9.43□□□□□ -0.9
RDN18-2RDN18-2 LEU9Q12166 604 aaKnown RBP9.43□□□□□ -0.9
RDN18-2RDN18-2 YPR1Q12458 312 aa9.43□□□□□ -0.9
RDN18-2RDN18-2 LSO1Q3E827 93 aa9.43□□□□□ -0.9
RDN18-2RDN18-2 KIN28P06242 306 aa9.42□□□□□ -0.9
RDN18-2RDN18-2 STF2P16965 84 aa9.42□□□□□ -0.9
RDN18-2RDN18-2 RPA135P22138 1203 aaKnown RBP9.42□□□□□ -0.9
RDN18-2RDN18-2 YCL002CP25565 263 aa9.42□□□□□ -0.9
RDN18-2RDN18-2 YEF1P32622 495 aa9.42□□□□□ -0.9
RDN18-2RDN18-2 FMP52P40008 231 aa9.42□□□□□ -0.9
RDN18-2RDN18-2 COS10P52924 374 aa9.42□□□□□ -0.9
RDN18-2RDN18-2 EGD1Q02642 157 aaKnown RBP9.42□□□□□ -0.9
RDN18-2RDN18-2 IPK1Q06667 281 aa9.42□□□□□ -0.9
RDN18-2RDN18-2 YLR099W-AQ3E798 87 aa9.42□□□□□ -0.9
RDN18-2RDN18-2 CYC1P00044 109 aaPredicted RBP9.42□□□□□ -0.9
RDN18-2RDN18-2 PHO80P20052 293 aa9.42□□□□□ -0.9
RDN18-2RDN18-2 PRP2P20095 876 aaPredicted RBP9.42□□□□□ -0.9
RDN18-2RDN18-2 HOM6P31116 359 aaKnown RBP9.42□□□□□ -0.9
RDN18-2RDN18-2 MTC2P34246 357 aa9.42□□□□□ -0.9
RDN18-2RDN18-2 MCM7P38132 845 aa9.42□□□□□ -0.9
RDN18-2RDN18-2 TRR2P38816 342 aa9.42□□□□□ -0.9
RDN18-2RDN18-2 PTH1P38876 190 aaKnown RBP9.42□□□□□ -0.9
RDN18-2RDN18-2 SMK1P41808 388 aa9.42□□□□□ -0.9
RDN18-2RDN18-2 POP1P41812 875 aa9.42□□□□□ -0.9
RDN18-2RDN18-2 VNX1P42839 908 aa9.42□□□□□ -0.9
RDN18-2RDN18-2 IBA57P47158 497 aa9.42□□□□□ -0.9
RDN18-2RDN18-2 NGL2Q03264 515 aaKnown RBP9.42□□□□□ -0.9
RDN18-2RDN18-2 HLR1Q04429 423 aa9.42□□□□□ -0.9
RDN18-2RDN18-2 YMR252CQ04814 134 aa9.42□□□□□ -0.9
RDN18-2RDN18-2 TPO3Q06451 622 aa9.42□□□□□ -0.9
RDN18-2RDN18-2 IRC13Q08630 104 aa9.42□□□□□ -0.9
RDN18-2RDN18-2 TIR4Q12218 487 aaPredicted RBP9.42□□□□□ -0.9
RDN18-2RDN18-2 RPS18AP0CX55 146 aaKnown RBP9.41□□□□□ -0.9
RDN18-2RDN18-2 RPS18BP0CX56 146 aaPredicted RBP9.41□□□□□ -0.9
RDN18-2RDN18-2 HIS7P33734 552 aaKnown RBP9.41□□□□□ -0.9
RDN18-2RDN18-2 YOR062CP36025 268 aa9.41□□□□□ -0.9
RDN18-2RDN18-2 MRPL16P38064 232 aa9.41□□□□□ -0.9
RDN18-2RDN18-2 THI2P38141 450 aa9.41□□□□□ -0.9
RDN18-2RDN18-2 YGL101WP53144 215 aa9.41□□□□□ -0.9
RDN18-2RDN18-2 SEC13Q04491 297 aaKnown RBP9.41□□□□□ -0.9
RDN18-2RDN18-2 DET1Q99288 334 aaKnown RBP9.41□□□□□ -0.9
RDN18-2RDN18-2 GAL4P04386 881 aa9.4□□□□□ -0.9
RDN18-2RDN18-2 RPL6BP05739 176 aaKnown RBP9.4□□□□□ -0.9
RDN18-2RDN18-2 SAC7P17121 654 aa9.4□□□□□ -0.9
RDN18-2RDN18-2 SAR1P20606 190 aaKnown RBP9.4□□□□□ -0.9
RDN18-2RDN18-2 PUP1P25043 261 aa9.4□□□□□ -0.9
RDN18-2RDN18-2 ERG9P29704 444 aa9.4□□□□□ -0.9
RDN18-2RDN18-2 FUN26P31381 517 aa9.4□□□□□ -0.9
RDN18-2RDN18-2 PUB1P32588 453 aaKnown RBP RIP-Chip data9.4□□□□□ -0.9not detected
RDN18-2RDN18-2 DTR1P38125 572 aa9.4□□□□□ -0.9
RDN18-2RDN18-2 PAU24P38155 120 aa9.4□□□□□ -0.9
RDN18-2RDN18-2 HPA3P39979 161 aa9.4□□□□□ -0.9
RDN18-2RDN18-2 YJR098CP47139 656 aa9.4□□□□□ -0.9
RDN18-2RDN18-2 PLP1Q04004 230 aa9.4□□□□□ -0.9
RDN18-2RDN18-2 YOR283WQ12040 230 aaKnown RBP9.4□□□□□ -0.9
RDN18-2RDN18-2 ATG41Q12048 136 aa9.4□□□□□ -0.9
RDN18-2RDN18-2 YDL177CQ12257 170 aa9.4□□□□□ -0.9
RDN18-2RDN18-2 YDR262WQ12331 272 aa9.4□□□□□ -0.9
RDN18-2RDN18-2 EXG1P23776 448 aaKnown RBP9.4□□□□□ -0.91
RDN18-2RDN18-2 YCR102CP25608 368 aa9.4□□□□□ -0.91
RDN18-2RDN18-2 AHC2P25649 128 aa9.4□□□□□ -0.91
RDN18-2RDN18-2 SNC1P31109 117 aa9.4□□□□□ -0.91
RDN18-2RDN18-2 TMA19P35691 167 aaKnown RBP9.4□□□□□ -0.91
RDN18-2RDN18-2 HRB1P38922 454 aaKnown RBP RIP-Chip data9.4□□□□□ -0.91not detected
RDN18-2RDN18-2 PRP39P39682 629 aaKnown RBP9.4□□□□□ -0.91
RDN18-2RDN18-2 LSM7P53905 115 aaKnown RBP9.4□□□□□ -0.91
RDN18-2RDN18-2 TDA1Q03533 586 aa9.4□□□□□ -0.91
RDN18-2RDN18-2 SMA2Q04658 369 aa9.4□□□□□ -0.91
RDN18-2RDN18-2 YMR315WQ04869 349 aaKnown RBP9.4□□□□□ -0.91
RDN18-2RDN18-2 YPR109WQ06104 294 aa9.4□□□□□ -0.91
RDN18-2RDN18-2 YPR091CQ06833 770 aa9.4□□□□□ -0.91
RDN18-2RDN18-2 THI73Q07904 523 aa9.4□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 70.6 ms