RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 GPR182O15218 404 aa18.4■□□□□ 0.54
COLCA2-207ENST00000639470 CENPBP07199 599 aaPredicted RBP18.4■□□□□ 0.54
COLCA2-207ENST00000639470 STAG3L1P0CL83 205 aa18.4■□□□□ 0.54
COLCA2-207ENST00000639470 DARSP14868 501 aaKnown RBP18.4■□□□□ 0.54
COLCA2-207ENST00000639470 PBX3P40426 434 aa18.4■□□□□ 0.54
COLCA2-207ENST00000639470 CYP4A11Q02928 519 aa18.4■□□□□ 0.54
COLCA2-207ENST00000639470 SPIRE1Q08AE8 756 aa18.4■□□□□ 0.54
COLCA2-207ENST00000639470 PPP2R5CQ13362 524 aa18.4■□□□□ 0.54
COLCA2-207ENST00000639470 CLUL1Q15846 466 aa18.4■□□□□ 0.54
COLCA2-207ENST00000639470 AAK1Q2M2I8 961 aa18.4■□□□□ 0.54
COLCA2-207ENST00000639470 LONRF3Q496Y0 759 aa18.4■□□□□ 0.54
COLCA2-207ENST00000639470 TIGD5Q53EQ6 642 aa18.4■□□□□ 0.54
COLCA2-207ENST00000639470 NCAPH2Q6IBW4 605 aa18.4■□□□□ 0.54
COLCA2-207ENST00000639470 PPP4R3AQ6IN85 833 aa18.4■□□□□ 0.54
COLCA2-207ENST00000639470 SLC24A5Q71RS6 500 aa18.4■□□□□ 0.54
COLCA2-207ENST00000639470 CCDC83Q8IWF9 413 aa18.4■□□□□ 0.54
COLCA2-207ENST00000639470 RNF169Q8NCN4 708 aa18.4■□□□□ 0.54
COLCA2-207ENST00000639470 RDM1Q8NG50 284 aa18.4■□□□□ 0.54
COLCA2-207ENST00000639470 SPPL3Q8TCT6 385 aa18.4■□□□□ 0.54
COLCA2-207ENST00000639470 NLRP7Q8WX94 980 aa18.4■□□□□ 0.54
COLCA2-207ENST00000639470 C11orf84Q9BUA3 381 aaPredicted RBP18.4■□□□□ 0.54
COLCA2-207ENST00000639470 NIFKQ9BYG3 293 aaKnown RBP18.4■□□□□ 0.54
COLCA2-207ENST00000639470 NSUN3Q9H649 340 aaKnown RBP18.4■□□□□ 0.54
COLCA2-207ENST00000639470 RAPGEFL1Q9UHV5 662 aa18.4■□□□□ 0.54
COLCA2-207ENST00000639470 MUC3AQ02505 3323 aa18.4■□□□□ 0.54
COLCA2-207ENST00000639470 A0A087WZ62 844 aa18.39■□□□□ 0.53
COLCA2-207ENST00000639470 IGKV6-21A0A0C4DH24 114 aa18.39■□□□□ 0.53
COLCA2-207ENST00000639470 MMP1P03956 469 aa18.39■□□□□ 0.53
COLCA2-207ENST00000639470 EIF4BP23588 611 aaKnown RBP18.39■□□□□ 0.53
COLCA2-207ENST00000639470 CTTNQ14247 550 aaKnown RBP18.39■□□□□ 0.53
COLCA2-207ENST00000639470 LRRC55Q6ZSA7 311 aa18.39■□□□□ 0.53
COLCA2-207ENST00000639470 DIS3L2Q8IYB7 885 aaKnown RBP18.39■□□□□ 0.53
COLCA2-207ENST00000639470 DYDC2Q96IM9 177 aa18.39■□□□□ 0.53
COLCA2-207ENST00000639470 FDXACB1Q9BRP7 624 aaPredicted RBP18.39■□□□□ 0.53
COLCA2-207ENST00000639470 IGFLR1Q9H665 355 aa18.39■□□□□ 0.53
COLCA2-207ENST00000639470 CLDND1Q9NY35 253 aa18.39■□□□□ 0.53
COLCA2-207ENST00000639470 KIAA1671Q9BY89 1806 aa18.39■□□□□ 0.53
COLCA2-207ENST00000639470 RB1P06400 928 aa18.38■□□□□ 0.53
COLCA2-207ENST00000639470 ATF7P17544 494 aaPredicted RBP18.38■□□□□ 0.53
COLCA2-207ENST00000639470 XBP1P17861 261 aa18.38■□□□□ 0.53
COLCA2-207ENST00000639470 TMOD1P28289 359 aa18.38■□□□□ 0.53
COLCA2-207ENST00000639470 LTBRP36941 435 aa18.38■□□□□ 0.53
COLCA2-207ENST00000639470 PSMC5P62195 406 aa18.38■□□□□ 0.53
COLCA2-207ENST00000639470 FAM189BP81408 668 aa18.38■□□□□ 0.53
COLCA2-207ENST00000639470 RBM10P98175 930 aaKnown RBP18.38■□□□□ 0.53
COLCA2-207ENST00000639470 RHPN2Q8IUC4 686 aa18.38■□□□□ 0.53
COLCA2-207ENST00000639470 FAM177A1Q8N128 213 aaPredicted RBP18.38■□□□□ 0.53
COLCA2-207ENST00000639470 NLRP4Q96MN2 994 aa18.38■□□□□ 0.53
COLCA2-207ENST00000639470 TYW1Q9NV66 732 aaKnown RBP18.38■□□□□ 0.53
COLCA2-207ENST00000639470 MYH9P35579 1960 aaKnown RBP18.38■□□□□ 0.53
COLCA2-207ENST00000639470 WDR81Q562E7 1941 aa18.37■□□□□ 0.53
COLCA2-207ENST00000639470 MEIS3P2A8K0S8 358 aa18.37■□□□□ 0.53
COLCA2-207ENST00000639470 GCFC2P16383 781 aaKnown RBP18.37■□□□□ 0.53
COLCA2-207ENST00000639470 ATP2B1P20020 1258 aa18.37■□□□□ 0.53
COLCA2-207ENST00000639470 QARSP47897 775 aaKnown RBP18.37■□□□□ 0.53
COLCA2-207ENST00000639470 LEXMQ3ZCV2 418 aa18.37■□□□□ 0.53
COLCA2-207ENST00000639470 CLLU1OSQ5K130 101 aa18.37■□□□□ 0.53
COLCA2-207ENST00000639470 SPOUT1Q5T280 376 aaKnown RBP18.37■□□□□ 0.53
COLCA2-207ENST00000639470 ECHDC2Q86YB7 292 aa18.37■□□□□ 0.53
COLCA2-207ENST00000639470 POF1BQ8WVV4 589 aa18.37■□□□□ 0.53
COLCA2-207ENST00000639470 TMEM143Q96AN5 459 aa18.37■□□□□ 0.53
COLCA2-207ENST00000639470 FAM20AQ96MK3 541 aa18.37■□□□□ 0.53
COLCA2-207ENST00000639470 CASD1Q96PB1 797 aa18.37■□□□□ 0.53
COLCA2-207ENST00000639470 LXNQ9BS40 222 aa18.37■□□□□ 0.53
COLCA2-207ENST00000639470 TMEM60Q9H2L4 133 aa18.37■□□□□ 0.53
COLCA2-207ENST00000639470 CWH43Q9H720 699 aa18.37■□□□□ 0.53
COLCA2-207ENST00000639470 ATP6V0A4Q9HBG4 840 aa18.37■□□□□ 0.53
COLCA2-207ENST00000639470 CYP26B1Q9NR63 512 aa18.37■□□□□ 0.53
COLCA2-207ENST00000639470 C1orf112Q9NSG2 853 aa18.37■□□□□ 0.53
COLCA2-207ENST00000639470 TMEM161AQ9NX61 479 aa18.37■□□□□ 0.53
COLCA2-207ENST00000639470 SUCLA2Q9P2R7 463 aaPredicted RBP18.37■□□□□ 0.53
COLCA2-207ENST00000639470 RALGAPA2Q2PPJ7 1873 aa18.37■□□□□ 0.53
COLCA2-207ENST00000639470 TBX10O75333 385 aa18.36■□□□□ 0.53
COLCA2-207ENST00000639470 MAFO75444 373 aaPredicted RBP18.36■□□□□ 0.53
COLCA2-207ENST00000639470 COL19A1Q14993 1142 aa18.36■□□□□ 0.53
COLCA2-207ENST00000639470 PTCRAQ6ISU1 281 aaPredicted RBP18.36■□□□□ 0.53
COLCA2-207ENST00000639470 RBM23Q86U06 439 aaKnown RBP18.36■□□□□ 0.53
COLCA2-207ENST00000639470 COLGALT1Q8NBJ5 622 aa18.36■□□□□ 0.53
COLCA2-207ENST00000639470 NEK9Q8TD19 979 aa18.36■□□□□ 0.53
COLCA2-207ENST00000639470 WASF1Q92558 559 aa18.36■□□□□ 0.53
COLCA2-207ENST00000639470 LPPQ93052 612 aa18.36■□□□□ 0.53
COLCA2-207ENST00000639470 PABPC5Q96DU9 382 aaKnown RBP18.36■□□□□ 0.53
COLCA2-207ENST00000639470 EPHX3Q9H6B9 360 aa18.36■□□□□ 0.53
COLCA2-207ENST00000639470 MINDY3Q9H8M7 445 aa18.36■□□□□ 0.53
COLCA2-207ENST00000639470 MARCH6O60337 910 aa18.35■□□□□ 0.53
COLCA2-207ENST00000639470 EPHA7Q15375 998 aa18.35■□□□□ 0.53
COLCA2-207ENST00000639470 HELQQ8TDG4 1101 aa18.35■□□□□ 0.53
COLCA2-207ENST00000639470 CEP170P1Q96L14 293 aa18.35■□□□□ 0.53
COLCA2-207ENST00000639470 PLVAPQ9BX97 442 aa18.35■□□□□ 0.53
COLCA2-207ENST00000639470 RWDD3Q9Y3V2 267 aa18.35■□□□□ 0.53
COLCA2-207ENST00000639470 P4HBP07237 508 aaKnown RBP18.34■□□□□ 0.53
COLCA2-207ENST00000639470 ERVFC1P60507 584 aa18.34■□□□□ 0.53
COLCA2-207ENST00000639470 CTC1Q2NKJ3 1217 aa18.34■□□□□ 0.53
COLCA2-207ENST00000639470 ZNF598Q86UK7 904 aaKnown RBP18.34■□□□□ 0.53
COLCA2-207ENST00000639470 TPH2Q8IWU9 490 aa18.34■□□□□ 0.53
COLCA2-207ENST00000639470 P2RX5Q93086 422 aa18.34■□□□□ 0.53
COLCA2-207ENST00000639470 EIF2AK1Q9BQI3 630 aaKnown RBP18.34■□□□□ 0.53
COLCA2-207ENST00000639470 GCOM2Q9BZD3 368 aaPredicted RBP18.34■□□□□ 0.53
COLCA2-207ENST00000639470 LMAN2LQ9H0V9 348 aa18.34■□□□□ 0.53
COLCA2-207ENST00000639470 XPNPEP1Q9NQW7 623 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms