RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 HCN4Q9Y3Q4 1203 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 H2AFYO75367 372 aaKnown RBP6.71□□□□□ -1.33
CDKL5-205ENST00000623535 MAPRE1Q15691 268 aaKnown RBP6.71□□□□□ -1.33
CDKL5-205ENST00000623535 C8orf74Q6P047 294 aa6.71□□□□□ -1.33
CDKL5-205ENST00000623535 C11orf88Q6PI97 169 aa6.71□□□□□ -1.33
CDKL5-205ENST00000623535 KLHL7Q8IXQ5 586 aa6.71□□□□□ -1.33
CDKL5-205ENST00000623535 MSTO1Q9BUK6 570 aa6.71□□□□□ -1.33
CDKL5-205ENST00000623535 SYBUQ9NX95 663 aa6.71□□□□□ -1.33
CDKL5-205ENST00000623535 TRIM10Q9UDY6 481 aa6.71□□□□□ -1.33
CDKL5-205ENST00000623535 TRAF3IP3Q9Y228 551 aa6.71□□□□□ -1.33
CDKL5-205ENST00000623535 KRT33AO76009 404 aa6.71□□□□□ -1.33
CDKL5-205ENST00000623535 GGPS1O95749 300 aa6.71□□□□□ -1.33
CDKL5-205ENST00000623535 FYNP06241 537 aa6.71□□□□□ -1.33
CDKL5-205ENST00000623535 HSD17B4P51659 736 aa6.71□□□□□ -1.33
CDKL5-205ENST00000623535 PAK1Q13153 545 aa6.71□□□□□ -1.33
CDKL5-205ENST00000623535 HIST2H2ACQ16777 129 aaPredicted RBP6.71□□□□□ -1.33
CDKL5-205ENST00000623535 HIST2H2AA3Q6FI13 130 aa6.71□□□□□ -1.33
CDKL5-205ENST00000623535 SPOPLQ6IQ16 392 aa6.71□□□□□ -1.33
CDKL5-205ENST00000623535 NEK8Q86SG6 692 aa6.71□□□□□ -1.33
CDKL5-205ENST00000623535 MRPL46Q9H2W6 279 aaKnown RBP6.71□□□□□ -1.33
CDKL5-205ENST00000623535 UNC45AQ9H3U1 944 aa6.71□□□□□ -1.33
CDKL5-205ENST00000623535 ARFGAP3Q9NP61 516 aa6.71□□□□□ -1.33
CDKL5-205ENST00000623535 GRIN2AQ12879 1464 aa6.71□□□□□ -1.33
CDKL5-205ENST00000623535 ANO9A1A5B4 782 aa6.71□□□□□ -1.33
CDKL5-205ENST00000623535 MYO1FO00160 1098 aa6.71□□□□□ -1.33
CDKL5-205ENST00000623535 ADCY8P40145 1251 aa6.71□□□□□ -1.33
CDKL5-205ENST00000623535 TMEM132DQ14C87 1099 aa6.71□□□□□ -1.33
CDKL5-205ENST00000623535 SNRNP48Q6IEG0 339 aaKnown RBP6.71□□□□□ -1.33
CDKL5-205ENST00000623535 TMEM179Q6ZVK1 233 aa6.71□□□□□ -1.33
CDKL5-205ENST00000623535 MYOCDQ8IZQ8 938 aa6.71□□□□□ -1.33
CDKL5-205ENST00000623535 WDR41Q9HAD4 459 aa6.71□□□□□ -1.33
CDKL5-205ENST00000623535 ZSCAN22P10073 491 aaPredicted RBP6.71□□□□□ -1.34
CDKL5-205ENST00000623535 EPHB3P54753 998 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 PODNQ7Z5L7 613 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 CEP70Q8NHQ1 597 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 SSH3Q8TE77 659 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 NCLNQ969V3 563 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 MAGEC1O60732 1142 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 SERPINB6P35237 376 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 ZAP70P43403 619 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 ATP8B2P98198 1209 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 POLD3Q15054 466 aaPredicted RBP6.71□□□□□ -1.34
CDKL5-205ENST00000623535 EXOC3L4Q17RC7 722 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 PHLDB3Q6NSJ2 640 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 DNAJC24Q6P3W2 148 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 SLC20A1Q8WUM9 679 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 POLE3Q9NRF9 147 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 THEGQ9P2T0 379 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 TRIP10Q15642 601 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 KRT39Q6A163 491 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 SYNE4Q8N205 404 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 CCDC127Q96BQ5 260 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 RMDN1Q96DB5 314 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 ZFYVE19Q96K21 471 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 SPON2Q9BUD6 331 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 SMIM22K7EJ46 135 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 LAD1O00515 517 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 CRKLP46109 303 aaKnown RBP6.71□□□□□ -1.34
CDKL5-205ENST00000623535 CLK3P49761 638 aaKnown RBP6.71□□□□□ -1.34
CDKL5-205ENST00000623535 MAP3K7CLP57077 242 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 BNC1Q01954 994 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 ELAVL2Q12926 359 aaKnown RBP6.71□□□□□ -1.34
CDKL5-205ENST00000623535 TREML1Q86YW5 311 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 ZNF653Q96CK0 615 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 GUCA1BQ9UMX6 200 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 SCAF11Q99590 1463 aaKnown RBP6.71□□□□□ -1.34
CDKL5-205ENST00000623535 LZTS3O60299 673 aaPredicted RBP6.71□□□□□ -1.34
CDKL5-205ENST00000623535 KRT38O76015 456 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 RPS12P25398 132 aaKnown RBP6.71□□□□□ -1.34
CDKL5-205ENST00000623535 SPICE1Q8N0Z3 855 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 CASS4Q9NQ75 786 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 HOMER3Q9NSC5 361 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 TBC1D7Q9P0N9 293 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 HCN3Q9P1Z3 774 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 RPS6KB2Q9UBS0 482 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 APPL1Q9UKG1 709 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 TRIM17Q9Y577 477 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 V9GY48 417 aaPredicted RBP6.71□□□□□ -1.34
CDKL5-205ENST00000623535 ATP10AO60312 1499 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 CKBP12277 381 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 HLA-DPA1P20036 260 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 OCRLQ01968 901 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 DHX34Q14147 1143 aaKnown RBP6.71□□□□□ -1.34
CDKL5-205ENST00000623535 HIF1AQ16665 826 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 GNASQ5JWF2 1037 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 TMEM164Q5U3C3 297 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 GEMIN8Q9NWZ8 242 aaKnown RBP6.71□□□□□ -1.34
CDKL5-205ENST00000623535 SLC39A10Q9ULF5 831 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 IGSF9BQ9UPX0 1349 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 LRRC9Q6ZRR7 1453 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 TAF5LO75529 589 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 IL6STP40189 918 aaPredicted RBP6.71□□□□□ -1.34
CDKL5-205ENST00000623535 VPS41P49754 854 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 OXCT1P55809 520 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 FAM76AQ8TAV0 307 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 GMEB2Q9UKD1 530 aa6.71□□□□□ -1.34
CDKL5-205ENST00000623535 A0A088AWK7 358 aa6.7□□□□□ -1.34
CDKL5-205ENST00000623535 SUPT3HO75486 399 aa6.7□□□□□ -1.34
CDKL5-205ENST00000623535 ZNF10P21506 573 aaPredicted RBP6.7□□□□□ -1.34
CDKL5-205ENST00000623535 CLNS1AP54105 237 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms