RNA–Protein interactions for RNA: ENST00000602171.5

FARP1-239, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-239ENST00000602171 CYTH3O43739 400 aa8.5□□□□□ -1.05
FARP1-239ENST00000602171 PHACTR2O75167 634 aa8.5□□□□□ -1.05
FARP1-239ENST00000602171 CNMDO75829 334 aa8.5□□□□□ -1.05
FARP1-239ENST00000602171 FAM13AO94988 1023 aa8.5□□□□□ -1.05
FARP1-239ENST00000602171 DEXIO95424 95 aa8.5□□□□□ -1.05
FARP1-239ENST00000602171 FCER1AP12319 257 aa8.5□□□□□ -1.05
FARP1-239ENST00000602171 ALAS1P13196 640 aa8.5□□□□□ -1.05
FARP1-239ENST00000602171 ACPPP15309 386 aa8.5□□□□□ -1.05
FARP1-239ENST00000602171 ERCC3P19447 782 aa8.5□□□□□ -1.05
FARP1-239ENST00000602171 MPSTP25325 297 aa8.5□□□□□ -1.05
FARP1-239ENST00000602171 PSMC4P43686 418 aa8.5□□□□□ -1.05
FARP1-239ENST00000602171 PRMT2P55345 433 aa8.5□□□□□ -1.05
FARP1-239ENST00000602171 LACTBP83111 547 aaPredicted RBP8.5□□□□□ -1.05
FARP1-239ENST00000602171 BECN1Q14457 450 aa8.5□□□□□ -1.05
FARP1-239ENST00000602171 KCTD2Q14681 263 aa8.5□□□□□ -1.05
FARP1-239ENST00000602171 CPSF6Q16630 551 aaKnown RBP eCLIP8.5□□□□□ -1.05
FARP1-239ENST00000602171 USH1GQ495M9 461 aa8.5□□□□□ -1.05
FARP1-239ENST00000602171 PLEKHH3Q7Z736 793 aa8.5□□□□□ -1.05
FARP1-239ENST00000602171 ANKRD35Q8N283 1001 aa8.5□□□□□ -1.05
FARP1-239ENST00000602171 SNX29Q8TEQ0 813 aa8.5□□□□□ -1.05
FARP1-239ENST00000602171 ZNF296Q8WUU4 475 aaPredicted RBP8.5□□□□□ -1.05
FARP1-239ENST00000602171 TMX3Q96JJ7 454 aa8.5□□□□□ -1.05
FARP1-239ENST00000602171 SLC26A6Q9BXS9 759 aa8.5□□□□□ -1.05
FARP1-239ENST00000602171 CPVLQ9H3G5 476 aa8.5□□□□□ -1.05
FARP1-239ENST00000602171 SUGCTQ9HAC7 445 aa8.5□□□□□ -1.05
FARP1-239ENST00000602171 NCOA5Q9HCD5 579 aaKnown RBP8.5□□□□□ -1.05
FARP1-239ENST00000602171 MAP3K20Q9NYL2 800 aaKnown RBP8.5□□□□□ -1.05
FARP1-239ENST00000602171 PFASO15067 1338 aa8.5□□□□□ -1.05
FARP1-239ENST00000602171 ZNF536O15090 1300 aa8.5□□□□□ -1.05
FARP1-239ENST00000602171 STK36Q9NRP7 1315 aa8.5□□□□□ -1.05
FARP1-239ENST00000602171 B4DLN1 442 aa8.49□□□□□ -1.05
FARP1-239ENST00000602171 FOXN1O15353 648 aa8.49□□□□□ -1.05
FARP1-239ENST00000602171 HSP90AA1P07900 732 aaKnown RBP8.49□□□□□ -1.05
FARP1-239ENST00000602171 SCG2P13521 617 aa8.49□□□□□ -1.05
FARP1-239ENST00000602171 NPR3P17342 541 aa8.49□□□□□ -1.05
FARP1-239ENST00000602171 MAP4P27816 1152 aaKnown RBP8.49□□□□□ -1.05
FARP1-239ENST00000602171 MRPL12P52815 198 aaKnown RBP8.49□□□□□ -1.05
FARP1-239ENST00000602171 SNAP25P60880 206 aa8.49□□□□□ -1.05
FARP1-239ENST00000602171 TRIM29Q14134 588 aa8.49□□□□□ -1.05
FARP1-239ENST00000602171 NTRK3Q16288 839 aa8.49□□□□□ -1.05
FARP1-239ENST00000602171 PFKFB3Q16875 520 aaPredicted RBP8.49□□□□□ -1.05
FARP1-239ENST00000602171 MCTP2Q6DN12 878 aa8.49□□□□□ -1.05
FARP1-239ENST00000602171 HEATR3Q7Z4Q2 680 aa8.49□□□□□ -1.05
FARP1-239ENST00000602171 GPR142Q7Z601 462 aa8.49□□□□□ -1.05
FARP1-239ENST00000602171 CCDC83Q8IWF9 413 aa8.49□□□□□ -1.05
FARP1-239ENST00000602171 NECAB1Q8N987 351 aa8.49□□□□□ -1.05
FARP1-239ENST00000602171 C12orf50Q8NA57 414 aaPredicted RBP8.49□□□□□ -1.05
FARP1-239ENST00000602171 FAM184AQ8NB25 1140 aa8.49□□□□□ -1.05
FARP1-239ENST00000602171 SMG8Q8ND04 991 aaKnown RBP8.49□□□□□ -1.05
FARP1-239ENST00000602171 RGS22Q8NE09 1264 aa8.49□□□□□ -1.05
FARP1-239ENST00000602171 CCDC148Q8NFR7 591 aa8.49□□□□□ -1.05
FARP1-239ENST00000602171 PIBF1Q8WXW3 757 aa8.49□□□□□ -1.05
FARP1-239ENST00000602171 CUL5Q93034 780 aa8.49□□□□□ -1.05
FARP1-239ENST00000602171 PHKBQ93100 1093 aa8.49□□□□□ -1.05
FARP1-239ENST00000602171 DDX11Q96FC9 970 aa8.49□□□□□ -1.05
FARP1-239ENST00000602171 MMP19Q99542 508 aa8.49□□□□□ -1.05
FARP1-239ENST00000602171 MPHOSPH6Q99547 160 aaKnown RBP8.49□□□□□ -1.05
FARP1-239ENST00000602171 R3HDMLQ9H3Y0 253 aa8.49□□□□□ -1.05
FARP1-239ENST00000602171 SH3GLB2Q9NR46 395 aa8.49□□□□□ -1.05
FARP1-239ENST00000602171 HOMER2Q9NSB8 354 aa8.49□□□□□ -1.05
FARP1-239ENST00000602171 RNF146Q9NTX7 359 aa8.49□□□□□ -1.05
FARP1-239ENST00000602171 BARHL2Q9NY43 387 aa8.49□□□□□ -1.05
FARP1-239ENST00000602171 POLIQ9UNA4 740 aa8.49□□□□□ -1.05
FARP1-239ENST00000602171 PTPDC1A2A3K4 754 aa8.48□□□□□ -1.05
FARP1-239ENST00000602171 SLC15A5A6NIM6 579 aa8.48□□□□□ -1.05
FARP1-239ENST00000602171 WDR64B1ANS9 1081 aa8.48□□□□□ -1.05
FARP1-239ENST00000602171 SOX1O00570 391 aaPredicted RBP8.48□□□□□ -1.05
FARP1-239ENST00000602171 TNFRSF21O75509 655 aa8.48□□□□□ -1.05
FARP1-239ENST00000602171 LARGE1O95461 756 aa8.48□□□□□ -1.05
FARP1-239ENST00000602171 HSPA8P11142 646 aaKnown RBP8.48□□□□□ -1.05
FARP1-239ENST00000602171 TAL1P17542 331 aaPredicted RBP8.48□□□□□ -1.05
FARP1-239ENST00000602171 CALML3P27482 149 aa8.48□□□□□ -1.05
FARP1-239ENST00000602171 GNA11P29992 359 aa8.48□□□□□ -1.05
FARP1-239ENST00000602171 NAPAP54920 295 aa8.48□□□□□ -1.05
FARP1-239ENST00000602171 PKN2Q16513 984 aaKnown RBP8.48□□□□□ -1.05
FARP1-239ENST00000602171 DPP9Q86TI2 863 aa8.48□□□□□ -1.05
FARP1-239ENST00000602171 CD99L2Q8TCZ2 262 aa8.48□□□□□ -1.05
FARP1-239ENST00000602171 BICD2Q8TD16 824 aa8.48□□□□□ -1.05
FARP1-239ENST00000602171 INTS4Q96HW7 963 aaKnown RBP8.48□□□□□ -1.05
FARP1-239ENST00000602171 TMPRSS13Q9BYE2 586 aa8.48□□□□□ -1.05
FARP1-239ENST00000602171 PORCNQ9H237 461 aa8.48□□□□□ -1.05
FARP1-239ENST00000602171 PRDM10Q9NQV6 1147 aa8.48□□□□□ -1.05
FARP1-239ENST00000602171 ORC3Q9UBD5 711 aaPredicted RBP8.48□□□□□ -1.05
FARP1-239ENST00000602171 RIPK3Q9Y572 518 aa8.48□□□□□ -1.05
FARP1-239ENST00000602171 PCNTO95613 3336 aa8.47□□□□□ -1.05
FARP1-239ENST00000602171 A6NHS1 94 aa8.47□□□□□ -1.05
FARP1-239ENST00000602171 GCOM1H8Y6P7 765 aaPredicted RBP8.47□□□□□ -1.05
FARP1-239ENST00000602171 POLR2MP0CAP2 368 aa8.47□□□□□ -1.05
FARP1-239ENST00000602171 PDIA4P13667 645 aaKnown RBP8.47□□□□□ -1.05
FARP1-239ENST00000602171 ANP32AP39687 249 aaKnown RBP8.47□□□□□ -1.05
FARP1-239ENST00000602171 RGS2P41220 211 aa8.47□□□□□ -1.05
FARP1-239ENST00000602171 LBX1P52954 281 aa8.47□□□□□ -1.05
FARP1-239ENST00000602171 GRB14Q14449 540 aa8.47□□□□□ -1.05
FARP1-239ENST00000602171 SLC35G1Q2M3R5 365 aa8.47□□□□□ -1.05
FARP1-239ENST00000602171 GALNT17Q6IS24 598 aa8.47□□□□□ -1.05
FARP1-239ENST00000602171 NSMFQ6X4W1 530 aa8.47□□□□□ -1.05
FARP1-239ENST00000602171 RNF207Q6ZRF8 634 aa8.47□□□□□ -1.05
FARP1-239ENST00000602171 VN1R5Q7Z5H4 357 aa8.47□□□□□ -1.05
FARP1-239ENST00000602171 NSUN7Q8NE18 718 aaKnown RBP8.47□□□□□ -1.05
FARP1-239ENST00000602171 SMARCC2Q8TAQ2 1214 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms