RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 SPATA31C1P0DKV0 1188 aa18.31■□□□□ 0.52
DNMT1-221ENST00000589538 DARSP14868 501 aaKnown RBP18.31■□□□□ 0.52
DNMT1-221ENST00000589538 SYT1P21579 422 aa18.31■□□□□ 0.52
DNMT1-221ENST00000589538 RARRES1P49788 294 aa18.31■□□□□ 0.52
DNMT1-221ENST00000589538 HTRA4P83105 476 aaPredicted RBP18.31■□□□□ 0.52
DNMT1-221ENST00000589538 EMC2Q15006 297 aa18.31■□□□□ 0.52
DNMT1-221ENST00000589538 RHPN2Q8IUC4 686 aa18.31■□□□□ 0.52
DNMT1-221ENST00000589538 TMEM40Q8WWA1 233 aa18.31■□□□□ 0.52
DNMT1-221ENST00000589538 GUCD1Q96NT3 240 aa18.31■□□□□ 0.52
DNMT1-221ENST00000589538 CDX2Q99626 313 aaPredicted RBP18.31■□□□□ 0.52
DNMT1-221ENST00000589538 DBR1Q9UK59 544 aaKnown RBP18.31■□□□□ 0.52
DNMT1-221ENST00000589538 ST3GAL5Q9UNP4 418 aa18.31■□□□□ 0.52
DNMT1-221ENST00000589538 DENND3A2RUS2 1198 aa18.3■□□□□ 0.52
DNMT1-221ENST00000589538 MED24O75448 989 aa18.3■□□□□ 0.52
DNMT1-221ENST00000589538 UPP2O95045 317 aa18.3■□□□□ 0.52
DNMT1-221ENST00000589538 CCT6AP40227 531 aaKnown RBP18.3■□□□□ 0.52
DNMT1-221ENST00000589538 DRP2Q13474 957 aa18.3■□□□□ 0.52
DNMT1-221ENST00000589538 MXD4Q14582 209 aaPredicted RBP18.3■□□□□ 0.52
DNMT1-221ENST00000589538 KRT79Q5XKE5 535 aa18.3■□□□□ 0.52
DNMT1-221ENST00000589538 FAM117BQ6P1L5 589 aa18.3■□□□□ 0.52
DNMT1-221ENST00000589538 TMCO2Q7Z6W1 182 aaPredicted RBP18.3■□□□□ 0.52
DNMT1-221ENST00000589538 FAM228AQ86W67 206 aa18.3■□□□□ 0.52
DNMT1-221ENST00000589538 NPAS4Q8IUM7 802 aa18.3■□□□□ 0.52
DNMT1-221ENST00000589538 ZNF579Q8NAF0 562 aaKnown RBP18.3■□□□□ 0.52
DNMT1-221ENST00000589538 YME1L1Q96TA2 773 aa18.3■□□□□ 0.52
DNMT1-221ENST00000589538 GAS2L1Q99501 681 aaPredicted RBP18.3■□□□□ 0.52
DNMT1-221ENST00000589538 ATP6V0A4Q9HBG4 840 aa18.3■□□□□ 0.52
DNMT1-221ENST00000589538 COL4A3BPQ9Y5P4 624 aa18.3■□□□□ 0.52
DNMT1-221ENST00000589538 TTC3P53804 2025 aa18.3■□□□□ 0.52
DNMT1-221ENST00000589538 COL4A6Q14031 1691 aa18.29■□□□□ 0.52
DNMT1-221ENST00000589538 ZBTB39O15060 712 aa18.29■□□□□ 0.52
DNMT1-221ENST00000589538 ZSCAN20P17040 1043 aaPredicted RBP18.29■□□□□ 0.52
DNMT1-221ENST00000589538 SFPQP23246 707 aaKnown RBP eCLIP18.29■□□□□ 0.52
DNMT1-221ENST00000589538 TAP1Q03518 808 aa18.29■□□□□ 0.52
DNMT1-221ENST00000589538 GRIN2CQ14957 1233 aa18.29■□□□□ 0.52
DNMT1-221ENST00000589538 SP7Q8TDD2 431 aaPredicted RBP18.29■□□□□ 0.52
DNMT1-221ENST00000589538 PIGOQ8TEQ8 1089 aa18.29■□□□□ 0.52
DNMT1-221ENST00000589538 LINC01599Q8WXQ3 324 aa18.29■□□□□ 0.52
DNMT1-221ENST00000589538 TMX1Q9H3N1 280 aa18.29■□□□□ 0.52
DNMT1-221ENST00000589538 ZSCAN16Q9H4T2 348 aaPredicted RBP18.29■□□□□ 0.52
DNMT1-221ENST00000589538 A0A087WZ62 844 aa18.28■□□□□ 0.52
DNMT1-221ENST00000589538 STX6O43752 255 aa18.28■□□□□ 0.52
DNMT1-221ENST00000589538 SARSP49591 514 aaKnown RBP18.28■□□□□ 0.52
DNMT1-221ENST00000589538 POTEGQ6S5H5 508 aa18.28■□□□□ 0.52
DNMT1-221ENST00000589538 SLC24A5Q71RS6 500 aa18.28■□□□□ 0.52
DNMT1-221ENST00000589538 FERMT3Q86UX7 667 aa18.28■□□□□ 0.52
DNMT1-221ENST00000589538 KCTD17Q8N5Z5 321 aa18.28■□□□□ 0.52
DNMT1-221ENST00000589538 MCPH1Q8NEM0 835 aa18.28■□□□□ 0.52
DNMT1-221ENST00000589538 SNX29Q8TEQ0 813 aa18.28■□□□□ 0.52
DNMT1-221ENST00000589538 PRPF31Q8WWY3 499 aaKnown RBP18.28■□□□□ 0.52
DNMT1-221ENST00000589538 TMEM143Q96AN5 459 aa18.28■□□□□ 0.52
DNMT1-221ENST00000589538 NLRP4Q96MN2 994 aa18.28■□□□□ 0.52
DNMT1-221ENST00000589538 SAMD11Q96NU1 681 aa18.28■□□□□ 0.52
DNMT1-221ENST00000589538 ADAM2Q99965 735 aa18.28■□□□□ 0.52
DNMT1-221ENST00000589538 FDXACB1Q9BRP7 624 aaPredicted RBP18.28■□□□□ 0.52
DNMT1-221ENST00000589538 RGS18Q9NS28 235 aa18.28■□□□□ 0.52
DNMT1-221ENST00000589538 FOXD4L1Q9NU39 408 aa18.28■□□□□ 0.52
DNMT1-221ENST00000589538 LRFN2Q9ULH4 789 aa18.28■□□□□ 0.52
DNMT1-221ENST00000589538 ARHGEF35A5YM69 484 aa18.27■□□□□ 0.52
DNMT1-221ENST00000589538 SLC26A4O43511 780 aa18.27■□□□□ 0.52
DNMT1-221ENST00000589538 FOSL2P15408 326 aa18.27■□□□□ 0.52
DNMT1-221ENST00000589538 POU5F1BQ06416 359 aa18.27■□□□□ 0.52
DNMT1-221ENST00000589538 LAMTOR4Q0VGL1 99 aa18.27■□□□□ 0.52
DNMT1-221ENST00000589538 TFDP1Q14186 410 aa18.27■□□□□ 0.52
DNMT1-221ENST00000589538 PCBP1Q15365 356 aaKnown RBP eCLIP18.27■□□□□ 0.52
DNMT1-221ENST00000589538 SRGAP1Q7Z6B7 1085 aa18.27■□□□□ 0.52
DNMT1-221ENST00000589538 RTN4RL1Q86UN2 441 aaPredicted RBP18.27■□□□□ 0.52
DNMT1-221ENST00000589538 AK8Q96MA6 479 aa18.27■□□□□ 0.52
DNMT1-221ENST00000589538 TGS1Q96RS0 853 aaKnown RBP18.27■□□□□ 0.52
DNMT1-221ENST00000589538 CHST12Q9NRB3 414 aa18.27■□□□□ 0.52
DNMT1-221ENST00000589538 DACT1Q9NYF0 836 aa18.27■□□□□ 0.52
DNMT1-221ENST00000589538 LINC01553A4QN01 128 aa18.26■□□□□ 0.51
DNMT1-221ENST00000589538 MGEA5O60502 916 aa18.26■□□□□ 0.51
DNMT1-221ENST00000589538 PHKA2P46019 1235 aa18.26■□□□□ 0.51
DNMT1-221ENST00000589538 RESTQ13127 1097 aa18.26■□□□□ 0.51
DNMT1-221ENST00000589538 DSC3Q14574 896 aa18.26■□□□□ 0.51
DNMT1-221ENST00000589538 MYLIPQ8WY64 445 aa18.26■□□□□ 0.51
DNMT1-221ENST00000589538 ZNF668Q96K58 619 aaPredicted RBP18.26■□□□□ 0.51
DNMT1-221ENST00000589538 NT5C3AQ9H0P0 336 aa18.26■□□□□ 0.51
DNMT1-221ENST00000589538 PRDM12Q9H4Q4 367 aa18.26■□□□□ 0.51
DNMT1-221ENST00000589538 ELAC1Q9H777 363 aaKnown RBP18.26■□□□□ 0.51
DNMT1-221ENST00000589538 XPNPEP1Q9NQW7 623 aa18.26■□□□□ 0.51
DNMT1-221ENST00000589538 BMP2KQ9NSY1 1161 aaPredicted RBP18.26■□□□□ 0.51
DNMT1-221ENST00000589538 KIAA1024Q9UPX6 916 aa18.26■□□□□ 0.51
DNMT1-221ENST00000589538 DNM3Q9UQ16 869 aa18.26■□□□□ 0.51
DNMT1-221ENST00000589538 MTMR6Q9Y217 621 aa18.26■□□□□ 0.51
DNMT1-221ENST00000589538 PCDHB7Q9Y5E2 793 aa18.26■□□□□ 0.51
DNMT1-221ENST00000589538 CHD9Q3L8U1 2897 aa18.25■□□□□ 0.51
DNMT1-221ENST00000589538 LCHNA4D1U4 455 aa18.25■□□□□ 0.51
DNMT1-221ENST00000589538 VWA3AA6NCI4 1184 aa18.25■□□□□ 0.51
DNMT1-221ENST00000589538 C9IYK1 514 aa18.25■□□□□ 0.51
DNMT1-221ENST00000589538 USO1O60763 962 aaKnown RBP18.25■□□□□ 0.51
DNMT1-221ENST00000589538 DGKIO75912 1065 aa18.25■□□□□ 0.51
DNMT1-221ENST00000589538 SRGAP2CP0DJJ0 459 aa18.25■□□□□ 0.51
DNMT1-221ENST00000589538 ERVK-21P61565 698 aa18.25■□□□□ 0.51
DNMT1-221ENST00000589538 SF3A1Q15459 793 aaKnown RBP18.25■□□□□ 0.51
DNMT1-221ENST00000589538 IL17AQ16552 155 aa18.25■□□□□ 0.51
DNMT1-221ENST00000589538 KSR1Q8IVT5 923 aa18.25■□□□□ 0.51
DNMT1-221ENST00000589538 CRIPAKQ8N1N5 446 aa18.25■□□□□ 0.51
DNMT1-221ENST00000589538 FIBCD1Q8N539 461 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 163.1 ms