RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-222ENST00000584377 IPO5O00410 1097 aaKnown RBP14.4□□□□□ -0.1
CSNK1D-222ENST00000584377 RNASE9P60153 205 aaKnown RBP14.4□□□□□ -0.1
CSNK1D-222ENST00000584377 RPS6KA1Q15418 735 aa14.4□□□□□ -0.1
CSNK1D-222ENST00000584377 IFT20Q8IY31 132 aa14.4□□□□□ -0.1
CSNK1D-222ENST00000584377 GMLQ99445 158 aa14.4□□□□□ -0.1
CSNK1D-222ENST00000584377 LXNQ9BS40 222 aa14.4□□□□□ -0.1
CSNK1D-222ENST00000584377 MKNK1Q9BUB5 465 aa14.4□□□□□ -0.1
CSNK1D-222ENST00000584377 TEKT3Q9BXF9 490 aa14.4□□□□□ -0.1
CSNK1D-222ENST00000584377 ODF2LQ9ULJ1 636 aa14.4□□□□□ -0.1
CSNK1D-222ENST00000584377 PLA2G6O60733 806 aa14.39□□□□□ -0.11
CSNK1D-222ENST00000584377 GLI1P08151 1106 aa14.39□□□□□ -0.11
CSNK1D-222ENST00000584377 LARGE2Q8N3Y3 721 aa14.39□□□□□ -0.11
CSNK1D-222ENST00000584377 JPH2Q9BR39 696 aaPredicted RBP14.39□□□□□ -0.11
CSNK1D-222ENST00000584377 GLIS2Q9BZE0 524 aaPredicted RBP14.39□□□□□ -0.11
CSNK1D-222ENST00000584377 AGPAT3Q9NRZ7 376 aa14.39□□□□□ -0.11
CSNK1D-222ENST00000584377 FEM1BQ9UK73 627 aa14.39□□□□□ -0.11
CSNK1D-222ENST00000584377 FRMD4BQ9Y2L6 1034 aa14.39□□□□□ -0.11
CSNK1D-222ENST00000584377 UBE4BO95155 1302 aa14.39□□□□□ -0.11
CSNK1D-222ENST00000584377 KCNK3O14649 394 aa14.39□□□□□ -0.11
CSNK1D-222ENST00000584377 SHOX2O60902 331 aaPredicted RBP14.39□□□□□ -0.11
CSNK1D-222ENST00000584377 GFPT2O94808 682 aa14.39□□□□□ -0.11
CSNK1D-222ENST00000584377 HEXIM1O94992 359 aaKnown RBP14.39□□□□□ -0.11
CSNK1D-222ENST00000584377 FERP16591 822 aa14.39□□□□□ -0.11
CSNK1D-222ENST00000584377 CYP2J2P51589 502 aa14.39□□□□□ -0.11
CSNK1D-222ENST00000584377 KRT12Q99456 494 aa14.39□□□□□ -0.11
CSNK1D-222ENST00000584377 GOLPH3Q9H4A6 298 aa14.39□□□□□ -0.11
CSNK1D-222ENST00000584377 ARHGEF35A5YM69 484 aa14.38□□□□□ -0.11
CSNK1D-222ENST00000584377 INPP5BP32019 993 aa14.38□□□□□ -0.11
CSNK1D-222ENST00000584377 CAP2P40123 477 aa14.38□□□□□ -0.11
CSNK1D-222ENST00000584377 STAT1P42224 750 aa14.38□□□□□ -0.11
CSNK1D-222ENST00000584377 FMO5P49326 533 aa14.38□□□□□ -0.11
CSNK1D-222ENST00000584377 CAVIN3Q969G5 261 aa14.38□□□□□ -0.11
CSNK1D-222ENST00000584377 KIF4AO95239 1232 aa14.38□□□□□ -0.11
CSNK1D-222ENST00000584377 H2AFZP0C0S5 128 aa14.38□□□□□ -0.11
CSNK1D-222ENST00000584377 GUCY2DQ02846 1103 aa14.38□□□□□ -0.11
CSNK1D-222ENST00000584377 B3GNT9Q6UX72 402 aa14.38□□□□□ -0.11
CSNK1D-222ENST00000584377 H2AFVQ71UI9 128 aa14.38□□□□□ -0.11
CSNK1D-222ENST00000584377 LRRC57Q8N9N7 239 aa14.38□□□□□ -0.11
CSNK1D-222ENST00000584377 USP38Q8NB14 1042 aa14.38□□□□□ -0.11
CSNK1D-222ENST00000584377 EPB41L5Q9HCM4 733 aa14.38□□□□□ -0.11
CSNK1D-222ENST00000584377 GDF3Q9NR23 364 aa14.38□□□□□ -0.11
CSNK1D-222ENST00000584377 NENFQ9UMX5 172 aa14.38□□□□□ -0.11
CSNK1D-222ENST00000584377 KIF13BQ9NQT8 1826 aa14.38□□□□□ -0.11
CSNK1D-222ENST00000584377 DDX39AO00148 427 aaKnown RBP14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 DDX3XO00571 662 aaKnown RBP eCLIP14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 CES2O00748 559 aa14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 TBC1D12O60347 775 aa14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 ZNF772Q68DY9 489 aaPredicted RBP14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 AGBL1Q96MI9 1066 aa14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 RIT2Q99578 217 aa14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 MXRA8Q9BRK3 442 aa14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 A1CFQ9NQ94 594 aaKnown RBP14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 ZNF277Q9NRM2 450 aaPredicted RBP14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 CCPG1Q9ULG6 757 aa14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 ESYT3A0FGR9 886 aa14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 GOLGA6CA6NDK9 693 aa14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 ZSCAN5CA6NGD5 496 aaPredicted RBP14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 F8VZ95 297 aa14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 EVI5O60447 810 aa14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 HIP1RO75146 1068 aa14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 GOLGA6DP0CG33 693 aa14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 ITGB5P18084 799 aa14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 SCP2P22307 547 aa14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 CARSP49589 748 aaKnown RBP14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 TNNC1P63316 161 aa14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 CBWD6Q4V339 395 aa14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 CBWD3Q5JTY5 395 aa14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 CBWD5Q5RIA9 395 aa14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 RTKN2Q8IZC4 609 aa14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 SYCP3Q8IZU3 236 aa14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 PRPF38AQ8NAV1 312 aaKnown RBP14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 TSEN2Q8NCE0 465 aaKnown RBP14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 TPCN2Q8NHX9 752 aa14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 U2AF1L4Q8WU68 220 aaKnown RBP14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 IFT81Q8WYA0 676 aa14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 DMAC2Q9NW81 257 aa14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 GOLGA6AQ9NYA3 693 aa14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 PKD2L1Q9P0L9 805 aa14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 NFU1Q9UMS0 254 aa14.37□□□□□ -0.11
CSNK1D-222ENST00000584377 TRIM49P0CI25 452 aa14.36□□□□□ -0.11
CSNK1D-222ENST00000584377 TRIM49CP0CI26 452 aa14.36□□□□□ -0.11
CSNK1D-222ENST00000584377 SOX5P35711 763 aa14.36□□□□□ -0.11
CSNK1D-222ENST00000584377 IRAK1P51617 712 aa14.36□□□□□ -0.11
CSNK1D-222ENST00000584377 PTPROQ16827 1216 aa14.36□□□□□ -0.11
CSNK1D-222ENST00000584377 FKBP1CQ5VVH2 108 aa14.36□□□□□ -0.11
CSNK1D-222ENST00000584377 TTLL6Q8N841 843 aa14.36□□□□□ -0.11
CSNK1D-222ENST00000584377 GIMAP7Q8NHV1 300 aa14.36□□□□□ -0.11
CSNK1D-222ENST00000584377 FAM76AQ8TAV0 307 aa14.36□□□□□ -0.11
CSNK1D-222ENST00000584377 PBKQ96KB5 322 aa14.36□□□□□ -0.11
CSNK1D-222ENST00000584377 STK33Q9BYT3 514 aa14.36□□□□□ -0.11
CSNK1D-222ENST00000584377 DNAJC12Q9UKB3 198 aa14.36□□□□□ -0.11
CSNK1D-222ENST00000584377 ATP8B3O60423 1300 aa14.36□□□□□ -0.11
CSNK1D-222ENST00000584377 EXOC3O60645 756 aa14.36□□□□□ -0.11
CSNK1D-222ENST00000584377 HSD17B4P51659 736 aa14.36□□□□□ -0.11
CSNK1D-222ENST00000584377 PAK2Q13177 524 aa14.36□□□□□ -0.11
CSNK1D-222ENST00000584377 NNTQ13423 1086 aa14.36□□□□□ -0.11
CSNK1D-222ENST00000584377 PPP2R5AQ15172 486 aa14.36□□□□□ -0.11
CSNK1D-222ENST00000584377 GRIPAP1Q4V328 841 aa14.36□□□□□ -0.11
CSNK1D-222ENST00000584377 EGFL6Q8IUX8 553 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms