RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 RFC5P40937 340 aa20.88■□□□□ 0.93
PKD1-223ENST00000561668 FXR2P51116 673 aaKnown RBP eCLIP20.88■□□□□ 0.93
PKD1-223ENST00000561668 GPC3P51654 580 aa20.88■□□□□ 0.93
PKD1-223ENST00000561668 RESTQ13127 1097 aa20.88■□□□□ 0.93
PKD1-223ENST00000561668 NBR1Q14596 966 aa20.88■□□□□ 0.93
PKD1-223ENST00000561668 XKR9Q5GH70 373 aa20.88■□□□□ 0.93
PKD1-223ENST00000561668 RHPN2Q8IUC4 686 aa20.88■□□□□ 0.93
PKD1-223ENST00000561668 NPAS4Q8IUM7 802 aa20.88■□□□□ 0.93
PKD1-223ENST00000561668 MICALL1Q8N3F8 863 aa20.88■□□□□ 0.93
PKD1-223ENST00000561668 ERMNQ8TAM6 284 aa20.88■□□□□ 0.93
PKD1-223ENST00000561668 CEP89Q96ST8 783 aa20.88■□□□□ 0.93
PKD1-223ENST00000561668 INO80BQ9C086 356 aaPredicted RBP20.88■□□□□ 0.93
PKD1-223ENST00000561668 ADAMTS10Q9H324 1103 aa20.88■□□□□ 0.93
PKD1-223ENST00000561668 LOXHD1Q8IVV2 1947 aa20.88■□□□□ 0.93
PKD1-223ENST00000561668 MYO9BQ13459 2157 aa20.87■□□□□ 0.93
PKD1-223ENST00000561668 IGKV6-21A0A0C4DH24 114 aa20.87■□□□□ 0.93
PKD1-223ENST00000561668 TECP42680 631 aa20.87■□□□□ 0.93
PKD1-223ENST00000561668 NPEPPSP55786 919 aa20.87■□□□□ 0.93
PKD1-223ENST00000561668 ATP2C1P98194 919 aaPredicted RBP20.87■□□□□ 0.93
PKD1-223ENST00000561668 PTGDRQ13258 359 aa20.87■□□□□ 0.93
PKD1-223ENST00000561668 BTG3Q14201 252 aaPredicted RBP20.87■□□□□ 0.93
PKD1-223ENST00000561668 PDIA5Q14554 519 aa20.87■□□□□ 0.93
PKD1-223ENST00000561668 SLC24A5Q71RS6 500 aa20.87■□□□□ 0.93
PKD1-223ENST00000561668 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.87■□□□□ 0.93
PKD1-223ENST00000561668 FBXO22Q8NEZ5 403 aa20.87■□□□□ 0.93
PKD1-223ENST00000561668 ZNF668Q96K58 619 aaPredicted RBP20.87■□□□□ 0.93
PKD1-223ENST00000561668 TMX1Q9H3N1 280 aa20.87■□□□□ 0.93
PKD1-223ENST00000561668 RGS18Q9NS28 235 aa20.87■□□□□ 0.93
PKD1-223ENST00000561668 DGKIO75912 1065 aa20.86■□□□□ 0.93
PKD1-223ENST00000561668 DARSP14868 501 aaKnown RBP20.86■□□□□ 0.93
PKD1-223ENST00000561668 POU3F3P20264 500 aaPredicted RBP20.86■□□□□ 0.93
PKD1-223ENST00000561668 SARSP49591 514 aaKnown RBP20.86■□□□□ 0.93
PKD1-223ENST00000561668 GRB10Q13322 594 aa20.86■□□□□ 0.93
PKD1-223ENST00000561668 FAM228AQ86W67 206 aa20.86■□□□□ 0.93
PKD1-223ENST00000561668 IGSF22Q8N9C0 903 aa20.86■□□□□ 0.93
PKD1-223ENST00000561668 TCP11Q8WWU5 503 aa20.86■□□□□ 0.93
PKD1-223ENST00000561668 C17orf80Q9BSJ5 609 aa20.86■□□□□ 0.93
PKD1-223ENST00000561668 ZSCAN16Q9H4T2 348 aaPredicted RBP20.86■□□□□ 0.93
PKD1-223ENST00000561668 FOXD4L1Q9NU39 408 aa20.86■□□□□ 0.93
PKD1-223ENST00000561668 WRAP73Q9P2S5 460 aaPredicted RBP20.86■□□□□ 0.93
PKD1-223ENST00000561668 RWDD3Q9Y3V2 267 aa20.86■□□□□ 0.93
PKD1-223ENST00000561668 MORC2Q9Y6X9 1032 aaPredicted RBP20.86■□□□□ 0.93
PKD1-223ENST00000561668 VPS37CA5D8V6 355 aaPredicted RBP20.85■□□□□ 0.93
PKD1-223ENST00000561668 EPOPA6NHQ4 379 aa20.85■□□□□ 0.93
PKD1-223ENST00000561668 GAS2O43903 313 aaKnown RBP20.85■□□□□ 0.93
PKD1-223ENST00000561668 DRP2Q13474 957 aa20.85■□□□□ 0.93
PKD1-223ENST00000561668 EPC2Q52LR7 807 aa20.85■□□□□ 0.93
PKD1-223ENST00000561668 ARL6IP4Q66PJ3 421 aaKnown RBP20.85■□□□□ 0.93
PKD1-223ENST00000561668 ZNF410Q86VK4 478 aa20.85■□□□□ 0.93
PKD1-223ENST00000561668 TMEM192Q8IY95 271 aa20.85■□□□□ 0.93
PKD1-223ENST00000561668 LINC01599Q8WXQ3 324 aa20.85■□□□□ 0.93
PKD1-223ENST00000561668 ANKEF1Q9NU02 776 aa20.85■□□□□ 0.93
PKD1-223ENST00000561668 LMCD1Q9NZU5 365 aa20.85■□□□□ 0.93
PKD1-223ENST00000561668 MTCH2Q9Y6C9 303 aa20.85■□□□□ 0.93
PKD1-223ENST00000561668 ADGRA3Q8IWK6 1321 aa20.84■□□□□ 0.93
PKD1-223ENST00000561668 A0A087WZ62 844 aa20.84■□□□□ 0.93
PKD1-223ENST00000561668 POTEMA6NI47 508 aa20.84■□□□□ 0.93
PKD1-223ENST00000561668 ASAP2O43150 1006 aa20.84■□□□□ 0.93
PKD1-223ENST00000561668 XRCC6P12956 609 aaKnown RBP eCLIP20.84■□□□□ 0.93
PKD1-223ENST00000561668 MUTP22033 750 aa20.84■□□□□ 0.93
PKD1-223ENST00000561668 SKIV2LQ15477 1246 aaKnown RBP20.84■□□□□ 0.93
PKD1-223ENST00000561668 IL17AQ16552 155 aa20.84■□□□□ 0.93
PKD1-223ENST00000561668 SPRED2Q7Z698 418 aa20.84■□□□□ 0.93
PKD1-223ENST00000561668 ZNF579Q8NAF0 562 aaKnown RBP20.84■□□□□ 0.93
PKD1-223ENST00000561668 PSPC1Q8WXF1 523 aaKnown RBP20.84■□□□□ 0.93
PKD1-223ENST00000561668 NLRP4Q96MN2 994 aa20.84■□□□□ 0.93
PKD1-223ENST00000561668 FDXACB1Q9BRP7 624 aaPredicted RBP20.84■□□□□ 0.93
PKD1-223ENST00000561668 RAB34Q9BZG1 259 aa20.84■□□□□ 0.93
PKD1-223ENST00000561668 DHX33Q9H6R0 707 aaKnown RBP20.84■□□□□ 0.93
PKD1-223ENST00000561668 CHD9Q3L8U1 2897 aa20.84■□□□□ 0.93
PKD1-223ENST00000561668 COL6A3P12111 3177 aa20.84■□□□□ 0.93
PKD1-223ENST00000561668 ZBTB39O15060 712 aa20.83■□□□□ 0.93
PKD1-223ENST00000561668 BMP15O95972 392 aa20.83■□□□□ 0.93
PKD1-223ENST00000561668 SPATA31C1P0DKV0 1188 aa20.83■□□□□ 0.93
PKD1-223ENST00000561668 SFPQP23246 707 aaKnown RBP eCLIP20.83■□□□□ 0.93
PKD1-223ENST00000561668 PTPROQ16827 1216 aa20.83■□□□□ 0.93
PKD1-223ENST00000561668 FERMT3Q86UX7 667 aa20.83■□□□□ 0.93
PKD1-223ENST00000561668 GDPD5Q8WTR4 605 aa20.83■□□□□ 0.93
PKD1-223ENST00000561668 PRPF31Q8WWY3 499 aaKnown RBP20.83■□□□□ 0.93
PKD1-223ENST00000561668 TMEM143Q96AN5 459 aa20.83■□□□□ 0.93
PKD1-223ENST00000561668 ZNF689Q96CS4 500 aaPredicted RBP20.83■□□□□ 0.93
PKD1-223ENST00000561668 MTRQ99707 1265 aa20.83■□□□□ 0.93
PKD1-223ENST00000561668 POLR3CQ9BUI4 534 aaPredicted RBP20.83■□□□□ 0.93
PKD1-223ENST00000561668 ATP6V0A4Q9HBG4 840 aa20.83■□□□□ 0.93
PKD1-223ENST00000561668 TUFT1Q9NNX1 390 aa20.83■□□□□ 0.93
PKD1-223ENST00000561668 DACT1Q9NYF0 836 aa20.83■□□□□ 0.93
PKD1-223ENST00000561668 COL4A3BPQ9Y5P4 624 aa20.83■□□□□ 0.93
PKD1-223ENST00000561668 STK24Q9Y6E0 443 aa20.83■□□□□ 0.93
PKD1-223ENST00000561668 TTC3P53804 2025 aa20.82■□□□□ 0.92
PKD1-223ENST00000561668 MGEA5O60502 916 aa20.82■□□□□ 0.92
PKD1-223ENST00000561668 RB1P06400 928 aa20.82■□□□□ 0.92
PKD1-223ENST00000561668 SRGAP2CP0DJJ0 459 aa20.82■□□□□ 0.92
PKD1-223ENST00000561668 RPA1P27694 616 aa20.82■□□□□ 0.92
PKD1-223ENST00000561668 GPM6BQ13491 265 aa20.82■□□□□ 0.92
PKD1-223ENST00000561668 EMC2Q15006 297 aa20.82■□□□□ 0.92
PKD1-223ENST00000561668 KSR1Q8IVT5 923 aa20.82■□□□□ 0.92
PKD1-223ENST00000561668 CMTR2Q8IYT2 770 aaKnown RBP20.82■□□□□ 0.92
PKD1-223ENST00000561668 NACC1Q96RE7 527 aa20.82■□□□□ 0.92
PKD1-223ENST00000561668 CHST12Q9NRB3 414 aa20.82■□□□□ 0.92
PKD1-223ENST00000561668 BMP2KQ9NSY1 1161 aaPredicted RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms