RNA–Protein interactions for RNA: ENST00000559942.5

PPP1R3E-204, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 1 (best)

Gene PPP1R3E, Length 1,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-204ENST00000559942 CHRDQ9H2X0 955 aa10.92□□□□□ -0.66
PPP1R3E-204ENST00000559942 ZNF287Q9HBT7 754 aa10.92□□□□□ -0.66
PPP1R3E-204ENST00000559942 VPS45Q9NRW7 570 aa10.92□□□□□ -0.66
PPP1R3E-204ENST00000559942 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.92□□□□□ -0.662e-8■■■■□ 23.4
PPP1R3E-204ENST00000559942 SUPT16HQ9Y5B9 1047 aaKnown RBP10.92□□□□□ -0.66
PPP1R3E-204ENST00000559942 MRVI1Q9Y6F6 885 aa10.92□□□□□ -0.66
PPP1R3E-204ENST00000559942 CDY2AQ9Y6F7 541 aa10.92□□□□□ -0.66
PPP1R3E-204ENST00000559942 LAMA4Q16363 1823 aa10.92□□□□□ -0.66
PPP1R3E-204ENST00000559942 PLIN4Q96Q06 1357 aa10.91□□□□□ -0.66
PPP1R3E-204ENST00000559942 SHISA7A6NL88 538 aa10.91□□□□□ -0.66
PPP1R3E-204ENST00000559942 CAPN9O14815 690 aa10.91□□□□□ -0.66
PPP1R3E-204ENST00000559942 IPO8O15397 1037 aaKnown RBP10.91□□□□□ -0.66
PPP1R3E-204ENST00000559942 NMT2O60551 498 aa10.91□□□□□ -0.66
PPP1R3E-204ENST00000559942 APPP05067 770 aa10.91□□□□□ -0.66
PPP1R3E-204ENST00000559942 IFIT2P09913 472 aaKnown RBP10.91□□□□□ -0.66
PPP1R3E-204ENST00000559942 CCR10P46092 362 aa10.91□□□□□ -0.66
PPP1R3E-204ENST00000559942 CXCL12P48061 93 aa10.91□□□□□ -0.66
PPP1R3E-204ENST00000559942 ADAM17P78536 824 aa10.91□□□□□ -0.66
PPP1R3E-204ENST00000559942 STXBP2Q15833 593 aa10.91□□□□□ -0.66
PPP1R3E-204ENST00000559942 SYDE2Q5VT97 1194 aa10.91□□□□□ -0.66
PPP1R3E-204ENST00000559942 TAF2Q6P1X5 1199 aa10.91□□□□□ -0.66
PPP1R3E-204ENST00000559942 ZNF852Q6ZMS4 543 aa10.91□□□□□ -0.66
PPP1R3E-204ENST00000559942 TPRG1Q6ZUI0 275 aa10.91□□□□□ -0.66
PPP1R3E-204ENST00000559942 DEFB124Q8NES8 71 aa10.91□□□□□ -0.66
PPP1R3E-204ENST00000559942 RHPN1Q8TCX5 695 aa10.91□□□□□ -0.66
PPP1R3E-204ENST00000559942 AUTS2Q8WXX7 1259 aa10.91□□□□□ -0.66
PPP1R3E-204ENST00000559942 IER2Q9BTL4 223 aa10.91□□□□□ -0.66
PPP1R3E-204ENST00000559942 EPB41L4AQ9HCS5 686 aaPredicted RBP10.91□□□□□ -0.66
PPP1R3E-204ENST00000559942 PADI3Q9ULW8 664 aa10.91□□□□□ -0.66
PPP1R3E-204ENST00000559942 IRAK3Q9Y616 596 aa10.91□□□□□ -0.66
PPP1R3E-204ENST00000559942 H0Y626 953 aa10.9□□□□□ -0.66
PPP1R3E-204ENST00000559942 PYCARD-AS1I3L0S3 204 aa10.9□□□□□ -0.66
PPP1R3E-204ENST00000559942 ANP32CO43423 234 aa10.9□□□□□ -0.66
PPP1R3E-204ENST00000559942 TRIM16O95361 564 aa10.9□□□□□ -0.66
PPP1R3E-204ENST00000559942 WTAPQ15007 396 aa10.9□□□□□ -0.66
PPP1R3E-204ENST00000559942 USH1GQ495M9 461 aa10.9□□□□□ -0.66
PPP1R3E-204ENST00000559942 HEATR6Q6AI08 1181 aaKnown RBP10.9□□□□□ -0.66
PPP1R3E-204ENST00000559942 TCEAL6Q6IPX3 200 aa10.9□□□□□ -0.66
PPP1R3E-204ENST00000559942 TRMT2AQ8IZ69 625 aaKnown RBP10.9□□□□□ -0.66
PPP1R3E-204ENST00000559942 VPS52Q8N1B4 723 aa10.9□□□□□ -0.66
PPP1R3E-204ENST00000559942 CLASRPQ8N2M8 674 aaKnown RBP10.9□□□□□ -0.66
PPP1R3E-204ENST00000559942 CMASQ8NFW8 434 aaPredicted RBP10.9□□□□□ -0.66
PPP1R3E-204ENST00000559942 LMBR1Q8WVP7 490 aa10.9□□□□□ -0.66
PPP1R3E-204ENST00000559942 TCEAL3Q969E4 200 aa10.9□□□□□ -0.66
PPP1R3E-204ENST00000559942 PCDHGA5Q9Y5G8 931 aa10.9□□□□□ -0.66
PPP1R3E-204ENST00000559942 SQORQ9Y6N5 450 aa10.9□□□□□ -0.66
PPP1R3E-204ENST00000559942 LAMA1P25391 3075 aa10.9□□□□□ -0.67
PPP1R3E-204ENST00000559942 DOCK6Q96HP0 2047 aa10.89□□□□□ -0.67
PPP1R3E-204ENST00000559942 CCDC195A0A1B0GUA6 201 aa10.89□□□□□ -0.67
PPP1R3E-204ENST00000559942 WISP1O95388 367 aa10.89□□□□□ -0.67
PPP1R3E-204ENST00000559942 LGALS2P05162 132 aa10.89□□□□□ -0.67
PPP1R3E-204ENST00000559942 MPLP40238 635 aa10.89□□□□□ -0.67
PPP1R3E-204ENST00000559942 RAP1GAPP47736 663 aa10.89□□□□□ -0.67
PPP1R3E-204ENST00000559942 RIPPLY3P57055 190 aa10.89□□□□□ -0.67
PPP1R3E-204ENST00000559942 SATB1Q01826 763 aa10.89□□□□□ -0.67
PPP1R3E-204ENST00000559942 PAK2Q13177 524 aa10.89□□□□□ -0.67
PPP1R3E-204ENST00000559942 CELF3Q5SZQ8 465 aaKnown RBP10.89□□□□□ -0.67
PPP1R3E-204ENST00000559942 CYP26C1Q6V0L0 522 aa10.89□□□□□ -0.67
PPP1R3E-204ENST00000559942 CHCHD4Q8N4Q1 142 aa10.89□□□□□ -0.67
PPP1R3E-204ENST00000559942 MDM1Q8TC05 714 aa10.89□□□□□ -0.67
PPP1R3E-204ENST00000559942 TBC1D5Q92609 795 aa10.89□□□□□ -0.67
PPP1R3E-204ENST00000559942 FGF14Q92915 247 aa10.89□□□□□ -0.67
PPP1R3E-204ENST00000559942 TAAR1Q96RJ0 339 aa10.89□□□□□ -0.67
PPP1R3E-204ENST00000559942 JADE2Q9NQC1 790 aa10.89□□□□□ -0.67
PPP1R3E-204ENST00000559942 CFHR1Q03591 330 aa10.88□□□□□ -0.67
PPP1R3E-204ENST00000559942 CEP85Q6P2H3 762 aa10.88□□□□□ -0.67
PPP1R3E-204ENST00000559942 GIMAP6Q6P9H5 292 aa10.88□□□□□ -0.67
PPP1R3E-204ENST00000559942 PARM1Q6UWI2 310 aa10.88□□□□□ -0.67
PPP1R3E-204ENST00000559942 LRRC55Q6ZSA7 311 aa10.88□□□□□ -0.67
PPP1R3E-204ENST00000559942 CACNA2D4Q7Z3S7 1137 aa10.88□□□□□ -0.67
PPP1R3E-204ENST00000559942 SLC39A11Q8N1S5 342 aa10.88□□□□□ -0.67
PPP1R3E-204ENST00000559942 ZNF513Q8N8E2 541 aaPredicted RBP10.88□□□□□ -0.67
PPP1R3E-204ENST00000559942 DNAJB3Q8WWF6 145 aa10.88□□□□□ -0.67
PPP1R3E-204ENST00000559942 COL12A1Q99715 3063 aa10.88□□□□□ -0.67
PPP1R3E-204ENST00000559942 RHOBTB2Q9BYZ6 727 aa10.88□□□□□ -0.67
PPP1R3E-204ENST00000559942 ZBP1Q9H171 429 aa10.88□□□□□ -0.67
PPP1R3E-204ENST00000559942 SLC32A1Q9H598 525 aa10.88□□□□□ -0.67
PPP1R3E-204ENST00000559942 IL17RBQ9NRM6 502 aa10.88□□□□□ -0.67
PPP1R3E-204ENST00000559942 PLXNB3Q9ULL4 1909 aa10.88□□□□□ -0.67
PPP1R3E-204ENST00000559942 TSPY2A6NKD2 308 aa10.87□□□□□ -0.67
PPP1R3E-204ENST00000559942 EIF3JO75822 258 aaKnown RBP10.87□□□□□ -0.67
PPP1R3E-204ENST00000559942 GGPS1O95749 300 aa10.87□□□□□ -0.67
PPP1R3E-204ENST00000559942 CTSAP10619 480 aa10.87□□□□□ -0.67
PPP1R3E-204ENST00000559942 FGFR1P11362 822 aa10.87□□□□□ -0.67
PPP1R3E-204ENST00000559942 EIF2AK2P19525 551 aaKnown RBP10.87□□□□□ -0.67
PPP1R3E-204ENST00000559942 KLRC2P26717 231 aa10.87□□□□□ -0.67
PPP1R3E-204ENST00000559942 CLCN4P51793 760 aa10.87□□□□□ -0.67
PPP1R3E-204ENST00000559942 SIM1P81133 766 aaPredicted RBP10.87□□□□□ -0.67
PPP1R3E-204ENST00000559942 MRPS6P82932 125 aaKnown RBP10.87□□□□□ -0.67
PPP1R3E-204ENST00000559942 COLEC12Q5KU26 742 aa10.87□□□□□ -0.67
PPP1R3E-204ENST00000559942 ZSCAN25Q6NSZ9 544 aa10.87□□□□□ -0.67
PPP1R3E-204ENST00000559942 GET4Q7L5D6 327 aaPredicted RBP10.87□□□□□ -0.67
PPP1R3E-204ENST00000559942 NSUN6Q8TEA1 469 aaKnown RBP10.87□□□□□ -0.67
PPP1R3E-204ENST00000559942 DCAF4Q8WV16 495 aa10.87□□□□□ -0.67
PPP1R3E-204ENST00000559942 OSBP2Q969R2 916 aa10.87□□□□□ -0.67
PPP1R3E-204ENST00000559942 TMEM169Q96HH4 297 aa10.87□□□□□ -0.67
PPP1R3E-204ENST00000559942 IWS1Q96ST2 819 aa10.87□□□□□ -0.67
PPP1R3E-204ENST00000559942 TMEM117Q9H0C3 514 aa10.87□□□□□ -0.67
PPP1R3E-204ENST00000559942 TMX1Q9H3N1 280 aa10.87□□□□□ -0.67
PPP1R3E-204ENST00000559942 ATP6V0A4Q9HBG4 840 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms